Basic Information

Gene Symbol
-
Assembly
GCA_035047505.1
Location
JAWNPM010000183.1:7833823-7834805[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-09 3.6e-06 27.4 0.0 26 89 151 206 133 206 0.84

Sequence Information

Coding Sequence
atgagcaATTCTCGAGAGCATCTTCAATGCAGTAGAAGAGGATGTACTTATACTACAAACAGATCTTACAACTTGGAGCGCCACGAGCGCAACCATGAGAAGGGCAAGGTGCCCGTATCCCAGTGTCAACCGTGTCCTCATTGCACATATGCAGCCGGATCAGTTCACAATTTAATGCGCCATATTAGCAAAAAACATGCAGTTTTAAATATACAGGAACCAAAGGGTTCGGCCCCTAGCAAACAGCCAGAGAAGCGAAAAGAACTGCCATCGACTAAGGAGTCAAAAACTACCATTGTTTGTAAACccgaagaagaaaaaaaacccaCAGAAGAAACGCCGGCATTTAAAGATGAACCAACTGAAAACTCTTCGCTTTGGCATTGGAGCTCACCAGAGCAGCAAGAGAAGAATTTCCTAAGACGTTGTGATCTAAGCGCAGAGTATAAAATACTCGATTGCACCGTCAATATGTTTAAgTTGTACACGCTGGTGAAAGCCAGGGGTGGAGCCATTATTGTGCGCAAATGGGATGACGTTGCTGCAGCCCTGGGTCTTCCAACAGGGTCGGGTCGTCATGTGCATGCAAAATATGTGGATTTACTTAACGAATTTGAACAAAATGAGGAAGAACGTCTGCAGGAATGCGAGAAAGTGAAAGGTTTGCCCACATGGTGGGACGACGGTGATTATATCTCTGATACAGAGACTTATATCCCCGATGATAAGCAGTTCGGAAGCCCATCAATTAATGTTCAAAATGCCTTGGTTACGCTAATATACAATAAGTATTATACGAACTACGTGAGAAATGCAAAGCCGTTCCAACGCTTTCGCGTAAAAGATTCGTGGCTTTGCGCCACAATGTTAAAATATCAAGCTTTAATTTGTCAACTgcattttaaacattatacaGATCCTTGA
Protein Sequence
MSNSREHLQCSRRGCTYTTNRSYNLERHERNHEKGKVPVSQCQPCPHCTYAAGSVHNLMRHISKKHAVLNIQEPKGSAPSKQPEKRKELPSTKESKTTIVCKPEEEKKPTEETPAFKDEPTENSSLWHWSSPEQQEKNFLRRCDLSAEYKILDCTVNMFKLYTLVKARGGAIIVRKWDDVAAALGLPTGSGRHVHAKYVDLLNEFEQNEEERLQECEKVKGLPTWWDDGDYISDTETYIPDDKQFGSPSINVQNALVTLIYNKYYTNYVRNAKPFQRFRVKDSWLCATMLKYQALICQLHFKHYTDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00478501;
90% Identity
-
80% Identity
-