Basic Information

Transcription Factor Domain

TF Family: COE
Domain: COE domain
PFAM: AnimalTFDB
TF Group: Helix-turn-helix
Description: This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.39 1.2e+03 -2.5 1.2 504 535 16 47 5 77 0.48

2 3 4.2e-49 1.3e-45 155.8 0.3 42 136 109 203 86 224 0.91

3 3 3.9e-35 1.2e-31 109.7 0.3 131 182 247 298 227 298 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.39	1.2e+03	-2.5	1.2	504	535	16	47	5	77	0.48
2	3	4.2e-49	1.3e-45	155.8	0.3	42	136	109	203	86	224	0.91
3	3	3.9e-35	1.2e-31	109.7	0.3	131	182	247	298	227	298	0.93

Coding Sequence: ATGTTCGCGCCGAGAAGAAGTGCGCGTGTGGCAGAAAGCgaaacggcaacagcaacagcaattgcgAGTGCTTCAGCGAGTGCTACAGCGAGTGTCACATTGTTGAAAATGACCGCGGGCTTTCATTCGGTGCATTCAGCGACGgcaaatcaacagcagcagcagcagcagcaaacacactcacacacacacctgggCAGCAACTCAGGTGGCCAAAGCAGCATTGGCAggcatctgcatctgctgcACGACGACAATCTGCTTCCAGACCACAATCACAACCAAGCCCTGAGCAACACAAACATTAAGATAATGCGCTGTGATGTGAGCCTGGGCATCGGGCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATTTGCGCAAATCGAATTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCCGGCCAGCCCATCGAGATAGAGAGAACGGCATTCATCGGCTTCATCGAGAAGGACTCCGAGTCGGACGCCACGAAGACCAACAATGGCATCCAGTACCGACTGCAGTTGCTCTACGCGAATGGTGCGAGGCAGGAACAGGACATATTTGTGCGGCTAATCGATTCAGTAACCAAAGCGcaccagcagcagcagcaacaaccacagcagcagcagcaggaggggGAGGTGCGGTACCACGATATTCAGGATATTCAGGATGTGTACGGCTCAATTGGTGCGGCGTTCGCTTCATTTGCGCTCATATTTCATACGCGCGTTCGCGTTGCCATCATCTACGAGGGCCAGGATAAGAACCCGGAGATGTGCCGTGTCCTGCTGACGCACGAGGTGATGTGCAGccgctgctgtgATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGATCCCGTCATTATTGATCGGTAA
Protein Sequence: MFAPRRSARVAESETATATAIASASASATASVTLLKMTAGFHSVHSATANQQQQQQQQTHSHTHLGSNSGGQSSIGRHLHLLHDDNLLPDHNHNQALSNTNIKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAHQQQQQQPQQQQQEGEVRYHDIQDIQDVYGSIGAAFASFALIFHTRVRVAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR

Sequence clustering based on sequence similarity using MMseqs2