Dpar013179.1
Basic Information
- Insect
- Drosophila paramelanica
- Gene Symbol
- bab2
- Assembly
- GCA_035043915.1
- Location
- JAWNMO010000677.1:106615-108837[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 5.5e-07 29.1 0.0 1 44 424 467 424 468 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGCCCAACGCCGCCGGTGGCCAGCAGCGAGGGCCAGACGTATTGCCTGCGCTGGAACAACCATCAGACGAACCTCGTGCAGATCCTGCACGCCCTCCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAGCAGTTCAAGGCGCATCGCGTTGTCCTGGCGGCCAATTCGCCCTACTTTCAGGCCATACTGCAGGACGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGCGTGAAGGGTTTTGAGATCGCCGCCCTGCTCCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGACTCTACGACAATCTCATGAAGTTCAATCACAAGGCGTCCAGCGCGGCCGAAGAGCGCCCACATCAGAACCATCAGTTTCAGGGTAGCACCGCTGCAGCGATTgcccatcatcatcagcagcagcagcaccaccagcaccagcaccagcagcagcaccaccatcaCTCCGCGCCCACCTCGAGCTCAAGCAGCAAGCCGTTGAATGGGGCCGGGCAACATCCTCACAGCCAGCACAACTCCTCCTCAGTGATCTCAACGTCCACGCACATTTCGCCCAGTGCCGCCATTTCGAGCAGCTGCTCGCCACCCCCGCCGTCGTTTGGCTCCTATCAGACGCCCTACACGAGCTACCCGGCCTCCAGCGGCGTGCCCATCAACATCAACGCGCACATCTCCGCTGGCGAGGCTCCGCTGACACCCACACACTCGACGCCTCATCCAGCTGCCGGAGAGGGTGGCCAGTGGCCGCTCTCCCCCTCGGCTGCCGCGGCGGCGATGCTCAATTCGGTGTACGAGTCGGCGGCGGACATGAATCCGCTCAAGCGCAAGAAGTTGTCGGCCATCTCGAGCATGCTGCTCAACACGACACGCGACACACCTATTTTGCGCAACGTGCTCGCCCAGGCCAATCCGGCGGACTCCTCGCAACCCAATCCGATGCTGCTGCCCGGTGTCAAGAGCGCCGCAGAGAAGACGCCCACCcaccagcaccaacaacaccaacagcatcagcatagcagcggcagcggcagcgctgccGGCGCTGGCAGCCACAGCTTCAACGGTTCCGACTATGGCGGCGACAAGGAGCCGCTGTCGCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGCCAAGGCGGCAAGAAACCAGAGTGGAAGCGCTATAAGCAATACACCCGGGCGGACATGATGTGCGCGATTCAGTGCGTCCGCGAGGGAATGAGCGCCCTCCAGGCCAGCCGCAAGTTTGGCCTGCCCAGCCGCACGCTGTACGACAAAGTGCGCAAGCTGAACATCACCACCGGCCGCGGCACCCATCGCACGCCCAAGCGCAGTCCACCTGGGGTGGGCGTTGAGTCCTCGGCGGCATTTCCCTATTCCGCCGCGGCcgcggcagccgcagctgcgcACAACTACGGCCAGACGGAGCTGGAGCGCGAGTCGAAGGAGCACGGACATGGCCAGGGCGGCGGAGGACATGGGCATGCGCACCACGGCATGCCGCCAACCATTCCGCACTCGGCCGCCGCTTTGCTGGATCACGCCTTCCTGCAGCAGGCGCTGGAGAACCGCGGCGGCGACATCGCCGGCCGCGAGGCGCTGCACGCCATGGCCTTGGCGGCAGCCGCTCACGCGGCGGCCAATCGCATGTCGAGCAGTCCGCCGGGCTCGAACGGCCATGCGGGCCGCTCGCCCGGCCACTACGCCGACCAGGAGGCGCTGGAGAAGCATGAGCAGCGTTTGATCAAGCGCGAGGCCATTGAAGAGGAGCGCGACGCTGACGACGAGGATGATCACGATCAGGTGGAGGATCTGTCGCTGGCGCGCAAAGAGCGCCCCGAGTCGCCCTActcgccgccaccgccgcgcGCCGCTTCGCCCATGGAAAGCGCCAGCGTGATCATGCACTCCAACTCCGCATCGGCCTCGACAAATGGCAAAGAGTCCCACGATCTAGACCTAGAGCGTGAGCATGAGCATGAGCAGGAGCCGGAACCAGAGCAGGAGCACGATCTTGAGGACTACAGCGAGACAGTAGCTTCGCCGCCGCCCTCGCAATTGGGCATGGGAGTCCACCTGAAGCGCGAGCTGCTGGGCAGCGATGAGGCTCAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKASSAAEERPHQNHQFQGSTAAAIAHHHQQQQHHQHQHQQQHHHHSAPTSSSSSKPLNGAGQHPHSQHNSSSVISTSTHISPSAAISSSCSPPPPSFGSYQTPYTSYPASSGVPININAHISAGEAPLTPTHSTPHPAAGEGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPADSSQPNPMLLPGVKSAAEKTPTHQHQQHQQHQHSSGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGQGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGVESSAAFPYSAAAAAAAAAHNYGQTELERESKEHGHGQGGGGHGHAHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAGRSPGHYADQEALEKHEQRLIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPPPPRAASPMESASVIMHSNSASASTNGKESHDLDLEREHEHEQEPEPEQEHDLEDYSETVASPPPSQLGMGVHLKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00567619; iTF_00495785; iTF_00495943; iTF_00547284; iTF_00547439; iTF_00541687; iTF_00541840; iTF_00598240; iTF_00598077;
- 80% Identity
- iTF_00567619;