Basic Information

Gene Symbol
gata5-a
Assembly
GCA_035044025.1
Location
JAWNMN010000401.1:2128538-2131705[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9 1.7e+04 -5.4 5.3 4 26 458 478 457 486 0.67
2 2 5.4e-17 1e-13 50.5 6.7 1 34 511 543 511 545 0.97

Sequence Information

Coding Sequence
ATGGAAGCGCAGACGacgccgcagcaacagcagcagcagcagcagcaacaacagcaacaattgcaacaacagcagcagcagcaagtgctgagcaaacaacagctgcaattgctggataaaatcaaaattgagaCTAGCAACGGCAACGATCCACAAGCCAATACCGCTCTGGAggagcaacaggagcagcagcaacagcaaacaacaacaaccgtaGGCGTTCTAGTGCAGACGAGCAGCCATGCCAGCGAATCCGATGATCAGCAGACACAGCAGACCCAATACGTTGTAGTTCCGCGCACACAACAGCGACGTATCCTAACAACAGCGGGTACACTCGAGTTGAACGAGGCGCATGAGGGCGatcacagcaacaataacagcagcaccGCCAGTTCGAATTCGGCACCTGAAGCGCACATTGAGTATCAGCGGAGTTCGCATCACTCACCCCACTTTATTCAAATGGCTCCGCGGACTGCGGCCGAGGTCGCCGAGCAGGTGGCACATCCTAGCACACTCTATGCGTATCCCTCGGGCCACATCATATGCAGCAGCGATGATGTGGCGCCCATTAAAATGGAGACAATCGACAAGAGCGATGTTTCGGGAGAATCGCAGTTGCAGCAACCCCAGCAACTaacacaccagcagcaacaacagcagcaatgcccCACACCCAATGGTGGACCTTATGGCGATACCATTGTGGTCAGCAACGAGGCTGTACTGCAGcatcatcaccagcagcagcaacagcaacagcaacaacaacagcagcaacatcagcaacatcatcagcagcaacaagcagcagttgctgcagccGCCGCTGTTGCAGCCGCTCACACGCACGGCGTGCGTTATGTAACCGAGGACACGCCCGGCGGCAATCTGTACTATGAAACTCCCGTTGTGGATGCCAGTGTGCATGCAAATGAGTCAAAGACCTATGCGGATTTGGGAAATGCCTATGCAACGTTTGCGCCCAACACGCcgttcagcagcaacagttatACGACGGCAACTTTGCAGCAGGGCAACACCATTTACACTGTGCCTGGGACGACACAGTTCATAACCAAATCCGATCCGAACTTGAATCCGTTGAGGCAGGGGCCAACGGTCCCATATCAAGCGCTATCGTTTATAGACAGTGGCAGTGGTGCTGATCCTGCGCTATGGACAACGACTAGTGGCGATTATCCGAATGTGTCCTTTACAAACTATCAAACGCAGGTCATTGAGGAATATCCCACGGGCAATATGACAGCCGCCCATTGGAACCCCGCTGGCAGCATTGGCAGCTATGATCACGGATTGGCAGCGACTAGCGCAATAACCTCAACCACCCATATGCAGGAGCTGAAGTGCGACACCTGTCAGACATCGTTCATGCGCAAGGGCATCGAGTGGCCCAACTGCCCCAATTGCACCAACTATGGGCGCAACCAGACGGGACGGCATGTGCCACAGCGCCAGAAGCCGAAGGCAGCCGCTGCGCCAAACAATCGCCGCAATGGAGTCACCTGCGCCAACTGTTCGACCAACTCGACAACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTCTGCAATGCCTGCGGACTTTATTTCAAGCTGCACAACATGAATCGACCCTTGTCCATGAAGAAGGAGGGCATTCAGAAACGCAAGCGCAAACCAAAGAACAATGGAGCATCTATGACCCATCGAGTGCTGCCAAGCATGTCGCAGGGTGTTAGTTTGATGGTGAACAACGGCTTAGTGTATCCATCACAAGTGACAGTGGGATTGCCTAATAGCCAACAGAATGCGAGTCCCGAGCTGCATGATATGTCCACAACTGGACCCGCTGGCGGACAGCGTGTGGTGACCATTCCGCTTAATCCCGCAGTGCCGACATCCGATGGCACATTGAACATGTCGCGTCATCATGTGACTAGCGAAAGTCACTCGCCTtttagccagcagcagcagcaacaacagcaacaacagcagcagcaacaacagcagcaacaacaacagcagcaacaacaacagcagcagcagcagcaacagcctccGTCACAGAGTCAATCGCCACATCTGCCCAACTCGGTCACACTGAACCGTCAGATTGCACAGTCtgtTCCTCCAATCGAAAGTGGTCGCAGTTCGAACAGTGAGCTGACTCCAACTGTTATAACGCGCACAGGTCTGCCGGAGCGCTCATCGAATAACTAA
Protein Sequence
MEAQTTPQQQQQQQQQQQQQLQQQQQQQVLSKQQLQLLDKIKIETSNGNDPQANTALEEQQEQQQQQTTTTVGVLVQTSSHASESDDQQTQQTQYVVVPRTQQRRILTTAGTLELNEAHEGDHSNNNSSTASSNSAPEAHIEYQRSSHHSPHFIQMAPRTAAEVAEQVAHPSTLYAYPSGHIICSSDDVAPIKMETIDKSDVSGESQLQQPQQLTHQQQQQQQCPTPNGGPYGDTIVVSNEAVLQHHHQQQQQQQQQQQQQHQQHHQQQQAAVAAAAAVAAAHTHGVRYVTEDTPGGNLYYETPVVDASVHANESKTYADLGNAYATFAPNTPFSSNSYTTATLQQGNTIYTVPGTTQFITKSDPNLNPLRQGPTVPYQALSFIDSGSGADPALWTTTSGDYPNVSFTNYQTQVIEEYPTGNMTAAHWNPAGSIGSYDHGLAATSAITSTTHMQELKCDTCQTSFMRKGIEWPNCPNCTNYGRNQTGRHVPQRQKPKAAAAPNNRRNGVTCANCSTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGASMTHRVLPSMSQGVSLMVNNGLVYPSQVTVGLPNSQQNASPELHDMSTTGPAGGQRVVTIPLNPAVPTSDGTLNMSRHHVTSESHSPFSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPSQSQSPHLPNSVTLNRQIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00577430;
90% Identity
iTF_00559151;
80% Identity
-