Basic Information

Insect: Drosophila paracracens
Gene Symbol: grau
Assembly: GCA_035044025.1
Location: JAWNMN010000399.1:4025544-4028586[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.15 9.8 6.8 0.9 6 23 297 314 297 314 0.98

2 9 0.0018 0.12 12.9 1.7 2 23 321 343 320 343 0.92

3 9 4e-05 0.0026 18.1 2.6 1 23 351 373 351 373 0.98

4 9 0.00063 0.042 14.3 0.4 2 21 379 398 378 399 0.93

5 9 0.08 5.3 7.7 0.0 2 23 402 423 401 423 0.96

6 9 6.1 4e+02 1.8 4.1 2 23 432 453 431 453 0.91

7 9 0.0011 0.074 13.5 1.0 2 23 461 483 460 483 0.93

8 9 1.5e-05 0.00099 19.4 1.0 3 23 491 511 491 511 0.99

9 9 0.0039 0.26 11.8 10.7 1 23 517 540 517 540 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.15	9.8	6.8	0.9	6	23	297	314	297	314	0.98
2	9	0.0018	0.12	12.9	1.7	2	23	321	343	320	343	0.92
3	9	4e-05	0.0026	18.1	2.6	1	23	351	373	351	373	0.98
4	9	0.00063	0.042	14.3	0.4	2	21	379	398	378	399	0.93
5	9	0.08	5.3	7.7	0.0	2	23	402	423	401	423	0.96
6	9	6.1	4e+02	1.8	4.1	2	23	432	453	431	453	0.91
7	9	0.0011	0.074	13.5	1.0	2	23	461	483	460	483	0.93
8	9	1.5e-05	0.00099	19.4	1.0	3	23	491	511	491	511	0.99
9	9	0.0039	0.26	11.8	10.7	1	23	517	540	517	540	0.98

Sequence Information

Coding Sequence: ATGATTTGCCGTCTGTGCCTGAACAGCGTGAACGACaccattcaaatatttgaggGCGTCGGCCTAGCGCTGAACATAGCCACAGTGCTGGCCAAATACTTTTGGTTTCAGCCGAAAAGCGATGATCCCATATCGACGGCCGTCTGTGGGGGCTGCTGGACGCGGGTCAGTGACTTTAACGAGTTCTATGCGAGCGTGGAAAAGGCGCATCGCCTCCTCACCGAACGTTTCTCCGTTAAAGGCggcgaacagcagcaggagaagccCCATGCAAATAGCCAGAGTTTGCTATTCGATGAAATCAAGCATGAGGCGATAGAAATACAGGAGGACTCGAAAGATTTCCTTTATCATGATGAGGACGATGACTTGTATCAAGAAGATCAGAATCAGGATTTGTATGTCAGCGGCAACGAGAGCGATGCAGCTGCATCGTTCAGCAACAAACAGTTTCTCAACGATGTGCTTGCCCAGCAGGCACAAGCAAATAGTGATCCTGCTGCAGAAGAAGTGCCTGCTGAACCGGAACCAGAGCAAACAGCTGCTGAACTGCAGCCATCTGAAGCCGTTCAGGAGCGTCGTGAAACGCGCTCCACGCGCGCAAAGAGCAAGGCACATCAGGAAAGTGAATCGCTCCCAGCTGAAAAGAAGACACTAGCCAAGCGACGAGGCAGACCAAAAACGGAGAAAGTCGTTGCCAGCGATGCGGAGGAGTTGCCCAAGCATAAACGTTATGTGGACTACAAGAAATCCATGCTGGAGATTGATGAGAAGATCGCCCAACATATGCGCCTCACCTGCAGCATCTGCCATGAGGAACAGGAGACGTTCCGGAAGCTGTGCGGACACATGACGCAGATGCATCATCTCAAGGGGTATGCGGTTTGCTGCAACAGGAAGTTCTACAAGCGCTTCCTTCTTACCGATCACATCGACCGCCACTCAAGTCCCGAGAAACTTAAATGCGATCTGTGCGATCTAACCTTTGCAGACAAGCAATGCCTGCGCAATCACGAGCTGCTTAAGCACCAGCCAGATGAGCAGAAGAAGTTCAAGTGCGAACAGTGTCCCAAGTGCTATAGCACGCAGTATCTATTGGATCAGCATCGCATCATACACATGGAGCGCAACGTGCCCTGCAACATCTGTGACAAACGTTTCCCCAATGTTTCAAAACTGTGCATGCACGTGAATTATAGCACCATGTGCGACATTTGCGCACAGGTTATTCGAGGAGCGGCTGCATTTGAGCGCCATCAGCTGACGCATGCTCGGATTACGGAGCCAAAGGTGCAGTGCGAGATATGTGGTTCGTGGCACAAAAACAAGACCAGTTTGAAGATGCACGTTCGTCGGCACAACGTCTCCTCGAAGGAATGCAAGTGCAACATCTGCGGCAAGGTATCGCCGAATCGCAGCGCCATGCTCAGCCATCGGAGCTATGTGCACAATTCGGATCGGGTGCTTGGCTGCagtgtgtgcaacaaaaaatttaagaagGCCATTAATCTGAAAGAGCACATGGCCACGCATACAGGCGAGGTGCTCTACAAGTGTGCGCACTGCCCGAAGACCTTCAAATCGAATTCCAACAAGCATACGCATCGCAAAAAGTGCCATCCCAAGGAGTTCGAGGAGGCGCGCAAGGCACGCATACAGAAGCGCATGACGCCGATGCAATCGAGCAATCACGACGGtgATAAATTGCTGGGCTTCTCGGACGATTCGCTAAGCAACGACTCAAATAATCTGTCGCCATCATGTCAGGAGCCATCGGCCAGCTCCGGCTTCAAATCCGACTCACATTCCGAAATGGGGGATCACACCGAATACGGGCATCTAACGCCGGACTCCATGTGCGATTCGCGTCGCATGTCCGACGAGATGTGCTACGAGGTCCCACTACCGCACGAGTGCTTCAATCTGGACTCGACACGCATCCTGGAGATGGTCAAGCAAACGATAGACTCGAAAATGCCGCCCATGGGCTTTGTGCTGCACAAGGGCAGCATTAGCTCTGAGGATAGCGGCGCCGAGTCCCGCTACAGCAGCGCCTCCAATGCATCCAGCGAGGCGACacccaatgccaatgccatgGCCAGCGTGGCGGCCAGTGCTGCTTGTACTGCGTCTAGCTATGGCGAACCGACCACAAATTTAAGTCTGGAGTACTCGGGTGGACTGCAGATCGAACTTCAGGTTTGCGAGGGACGCAGTCGCGATCATCATGGAGCTGGCAAAGCACTCACCATGCAACAGGTGGCGGGTTAA
Protein Sequence: MICRLCLNSVNDTIQIFEGVGLALNIATVLAKYFWFQPKSDDPISTAVCGGCWTRVSDFNEFYASVEKAHRLLTERFSVKGGEQQQEKPHANSQSLLFDEIKHEAIEIQEDSKDFLYHDEDDDLYQEDQNQDLYVSGNESDAAASFSNKQFLNDVLAQQAQANSDPAAEEVPAEPEPEQTAAELQPSEAVQERRETRSTRAKSKAHQESESLPAEKKTLAKRRGRPKTEKVVASDAEELPKHKRYVDYKKSMLEIDEKIAQHMRLTCSICHEEQETFRKLCGHMTQMHHLKGYAVCCNRKFYKRFLLTDHIDRHSSPEKLKCDLCDLTFADKQCLRNHELLKHQPDEQKKFKCEQCPKCYSTQYLLDQHRIIHMERNVPCNICDKRFPNVSKLCMHVNYSTMCDICAQVIRGAAAFERHQLTHARITEPKVQCEICGSWHKNKTSLKMHVRRHNVSSKECKCNICGKVSPNRSAMLSHRSYVHNSDRVLGCSVCNKKFKKAINLKEHMATHTGEVLYKCAHCPKTFKSNSNKHTHRKKCHPKEFEEARKARIQKRMTPMQSSNHDGDKLLGFSDDSLSNDSNNLSPSCQEPSASSGFKSDSHSEMGDHTEYGHLTPDSMCDSRRMSDEMCYEVPLPHECFNLDSTRILEMVKQTIDSKMPPMGFVLHKGSISSEDSGAESRYSSASNASSEATPNANAMASVAASAACTASSYGEPTTNLSLEYSGGLQIELQVCEGRSRDHHGAGKALTMQQVAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00497699;
90% Identity: iTF_00497699;
80% Identity: -