Basic Information

Insect: Drosophila paracracens
Gene Symbol: -
Assembly: GCA_035044025.1
Location: JAWNMN010000357.1:1639147-1640896[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.1 6e+02 1.2 1.5 2 17 13 28 12 29 0.89

2 9 1.5e-05 0.00099 19.4 5.5 1 23 288 310 288 310 0.98

3 9 0.00017 0.011 16.1 5.7 1 23 316 338 316 338 0.98

4 9 6.1e-06 0.0004 20.6 3.4 1 23 344 366 344 366 0.98

5 9 2.5e-05 0.0016 18.7 1.5 1 23 372 394 372 394 0.99

6 9 1.7e-05 0.0011 19.2 0.4 1 23 400 422 400 422 0.97

7 9 1.5e-05 0.001 19.4 0.2 1 23 428 450 428 450 0.98

8 9 7.7e-07 5.1e-05 23.5 3.2 1 23 456 478 456 478 0.98

9 9 0.0021 0.14 12.7 0.6 1 23 484 506 484 506 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.1	6e+02	1.2	1.5	2	17	13	28	12	29	0.89
2	9	1.5e-05	0.00099	19.4	5.5	1	23	288	310	288	310	0.98
3	9	0.00017	0.011	16.1	5.7	1	23	316	338	316	338	0.98
4	9	6.1e-06	0.0004	20.6	3.4	1	23	344	366	344	366	0.98
5	9	2.5e-05	0.0016	18.7	1.5	1	23	372	394	372	394	0.99
6	9	1.7e-05	0.0011	19.2	0.4	1	23	400	422	400	422	0.97
7	9	1.5e-05	0.001	19.4	0.2	1	23	428	450	428	450	0.98
8	9	7.7e-07	5.1e-05	23.5	3.2	1	23	456	478	456	478	0.98
9	9	0.0021	0.14	12.7	0.6	1	23	484	506	484	506	0.97

Sequence Information

Coding Sequence: ATGAGCGGAGGCGGTAGCAAGTCGGGCGTTGTCCTCAATTGCCGCACATGCACCCGGGCATGTAAACAATACAACTCGCTCCAAGATGAAATTGACATCGGTTCCGGCGGCAGCACCACGTTAGCGCACATGCTCAACTATTGTTCGAATCTATCGTTTGAGCCCCAGGATGGCGCCTCGATGCCCCAGCacatttgcatgttttgccTGCAGCAGTTGGAGCAGGCGTTTAATTTTAAGCGGATGGTCATCGATTCCGATGAACTGCTCCGTCTAGGCCTCGAGGTAGTCGAGAGCACGTCTAGTCCCAATGAACATCCCAATGACAGTAACAAGCAGGAGTATGTGATGATCGAGCTGCTTGGCAATGAGAACGATGCAGAATCTGTGGCCGAAACGAATATCACAACGCATATCGAGGCGTGCTATGAACAGAAAAAGGATATGGAAGCAGAGGCGGaacaatatgaatttattgtCGATAATCCGGATTTGGATGCATATGTTGAGACAGAGAATGCACTTGATTTGCAAACGACAGACTTTGAGTATGTGACAATCAAAGATTACGACTCGCAAGTTGAGGACGATGATGACATCGAGATTATGGACTCGATCGGCCTCGAAACTGTGAGCGATCAAATGGAAATTCAAATGCTTGACGAGCACATGGTTATTCTGTCCGGCGAGGAGCACATCGATGAGGTAATTGGCGAGGTCGAAGCCGACGAATTACTGGACATCGAGCGCGAGGAGCATTTGCTAACTGGTGGTAGCGAGGGTGATGAATTTCTGGATGAGTCAATGGCCGATGGGGGATCGCTACAGGTTGTTCCTGCACCTGGCGGCGAGGTCCTGCCCCATGTGTGTAATGTGTGCAACAAAGCGTTTCGACAGCAGTGTCGTCTCAATCAGCATATGCGCTCCCATGTGGACGAGAAACTGCACAAGTGTGAGATGTGTGGAAAGAAGCTGAAACACTTGCGCAACTACAAGGAGCACATGCTGACGCATACGAAAGTTAAGCCACATAAGTGTACGGTGTGTACACGCTTCTATCGCACCACGTCCAGCTTGGCTGCCCACATGCGCACGCATGCCGAGGACAAACCGTACAAGTGTGATCAGTGCGGACGCAGCTATGCGGCCATCGATCATCTGCGACGGCACAAGCTGACGCACACCGGCGAGCGTCCGTATGCGTGCGATCTGTGTGATAAGGCTTACTATGATTCGTCGTCGCTACGACAGCACAAGATTAGCCATACGGGCGAGAAGGCGTTCACCTGCGAAATCTGCGGCGTTGGCCTCTCACAGAAATCGGGCTATAAGAAGCACATGCTGGTGCATTCCGGCGAAAAGCCGCACAAATGCCACATCTGTGGGCGAGCCTTCACCTTCACCAGCAACCTAAACGCCCATGTCCGACTGCACTCCGGCGAGAAGCCATTCAAGTGCGACAAATGCATCAAGGCATTCCCAACGAAAAAGCGCCTCATTAGCCACCAGGGTGTGCACAACAAGGAGGCGCCCGTCACGACAACCAGCAACATTGTCAGACCCGGCTTCAATGGACAGTCGGAACGGGCCGCACTGGTTGCCGGTCGTCGGGCAGCCATCAATAGGACCGATGTCATGGATCATCAGCTGTCCACATCCAAGGTAGTCGTGGTTCTATAA
Protein Sequence: MSGGGSKSGVVLNCRTCTRACKQYNSLQDEIDIGSGGSTTLAHMLNYCSNLSFEPQDGASMPQHICMFCLQQLEQAFNFKRMVIDSDELLRLGLEVVESTSSPNEHPNDSNKQEYVMIELLGNENDAESVAETNITTHIEACYEQKKDMEAEAEQYEFIVDNPDLDAYVETENALDLQTTDFEYVTIKDYDSQVEDDDDIEIMDSIGLETVSDQMEIQMLDEHMVILSGEEHIDEVIGEVEADELLDIEREEHLLTGGSEGDEFLDESMADGGSLQVVPAPGGEVLPHVCNVCNKAFRQQCRLNQHMRSHVDEKLHKCEMCGKKLKHLRNYKEHMLTHTKVKPHKCTVCTRFYRTTSSLAAHMRTHAEDKPYKCDQCGRSYAAIDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGEKAFTCEICGVGLSQKSGYKKHMLVHSGEKPHKCHICGRAFTFTSNLNAHVRLHSGEKPFKCDKCIKAFPTKKRLISHQGVHNKEAPVTTTSNIVRPGFNGQSERAALVAGRRAAINRTDVMDHQLSTSKVVVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00570552;
90% Identity: iTF_00607240;
80% Identity: -