Basic Information

Gene Symbol
grh
Assembly
GCA_035044025.1
Location
JAWNMN010000399.1:3309375-3339843[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.11 9.4e+02 -1.2 4.5 78 115 230 268 190 290 0.44
2 3 1 8.9e+03 -4.3 5.1 104 120 548 557 513 577 0.47
3 3 2.7e-63 2.4e-59 200.3 0.5 24 221 691 883 677 885 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCACGGCGCTATAGCTTGGAGCCTGTGCAGCAAGCAACGCCGCCCCCGCCACCAGCGCcaccgcagcaacagcagcagcagcagcatcagcaacttcatcatcagcaacagcagcagccacatccacattcacaGCATCTTCTGCAAGCACAGCATCttaatcatcatcagcatcatcatcagcattatGCGAGTCAATCGCCACCGCATTACTCATATGTGCCGCCGCCCAAGGATGCGGCAGCTCAGTTGCAACAGCATCTGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAATTGAACGAACAGCAATCGACACCGCCGCCACAACCACCGCccccaccaccgccgccgccaccaacaGCGCACGCCTCCAACTCCACCTATGCGGTCTACAGCTACTACAGAGATGTCGATGTGGATGTCGATGTGGATGtagagcagcaccagcagcagcacaatgcTAGATCACAACAAGATCAGCAGCTTCTGTGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTAtcgcaaaatgaaattcaaggCTTTCTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacatcagcagcaacagcaacaacagcagcagcagcagcaacatcaacagcagcagcagcaacaacaacaacaacaacaaccgccaCATCCCAGCGACATTGTAACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCTgcagtgcaacagcagcaacagcagcagcagcagcaacagttgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCACCGCAGCAAACGGTTCAGTCATAACGCAGAAGATACTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacaacaacaacaagtgaaacTGCAACTAGTCCCGCCAGCGCCGCAACAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTATATCACAACGGATAGCTATGGCATGTATACGGCCACCAGATTGCCGCCCGGCCCACCGCCCGCAACCACATTCATAACGGAACCCTATTACCGGGAATACTTTGCGCCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCGCGCAGCCTCTACGGCGAGGATGTATCCGTGGCGGCGGCCACACAACCACAGCCCGTGGGCGGTGTCTATGAGGCGCGATTCACCAGCAATGGCCCAACCACCACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcaacagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcaacagcagcagcaacagcagcagcaacaacagcagcagcaggaacagtcGGGCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTTTGTCAGCCGGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTGAACAGCATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAACAGTCCAACCACATCGCTAGTGGATACAAGCACAAATGGCTCGACTCGCTCGAGACCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGagtGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGaTACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCCGTTCAGTGCCTCAGCACCGATTTCAGCAGTCAAAAGGGTGTTAAGGGTCTGCCGTTGCACGTACAGATCGATACGTTTGAGGATCCGCGGGATGCGACAGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGATGAGGAGCGTCGTGCCGCCAAACGCAAAATGACAGCAACTGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGATATGGAAAAGaGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGCTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCAATGTCCGATTTTGGGCCACCAATGAAACGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGCTATATGTGCGGCAGGAGAACGAGGAGATCTATACGCCGCTCCATGTGGTGCCCCCAACCACCATCGGCCTGCTAAATGCGattgaaaacaaatacaaaatctCAACAACGAgcataaataacatatatcGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRYSLEPVQQATPPPPPAPPQQQQQQQHQQLHHQQQQQPHPHSQHLLQAQHLNHHQHHHQHYASQSPPHYSYVPPPKDAAAQLQQHLPLTAAGLMQSVADEIQLNEQQSTPPPQPPPPPPPPPPTAHASNSTYAVYSYYRDVDVDVDVDVEQHQQQHNARSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQHQQQQQQQQQQQQHQQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGTAANGSVITQKILRVDAARTEAEATATSTATATAFEISDKTAAAATTTTTTSETATSPASAATDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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