Dpar001469.1
Basic Information
- Insect
- Drosophila parabipectinata
- Gene Symbol
- pnr
- Assembly
- GCA_018153455.1
- Location
- JAECYA010000178.1:11056787-11061710[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-18 1.2e-14 53.4 3.2 1 34 182 214 182 216 0.97 2 2 4.8e-19 1.3e-15 56.5 6.5 1 35 239 272 239 273 0.98
Sequence Information
- Coding Sequence
- ATGGGCATCTTACTGAGTGATGGCGATTCCACATCTGACCAGCTATCGACACGTGACTATCCACACTTTGGCAACGACCACCACAACGGCCCACTGTCAGTAGCCAGCAGTGCCTCTGCCTCCGCTTCAGGGTCAGCATCCGTATCCTCGTCTGCCTCTGCCGCCGTTGCTGCCAAGATGTACCACAGCAGCGCTGTAGCGGCGTACACAGATCTCGCCGCTGCCGGGAGCGCGGCCAGTGCCGGAGTTGGAGTCGGTGTGTCCGGCTATCATCACCAGCAGGCCGTGAATTCCCCGGTCTACGTGCCCTCAAACCGGCAGTACAACCATGTGGCCGCCCACTTTGGCAGCGCAGCCGCAGCCCAGAATGCCTGGCCTACGGATAGCTTTGGCTCTGCTCATGCCCAGCTGCCGGCACAGTTCTACACCCAAAATGCCGCCGTTATGATGAGCTCCTGGCGTAATCCGTACGACCCGACGGGCTTCCAGCGCTCTTCGCCCTACGAGAGCGCCATGGACTTCCAGTTTGGCGAAGGACGTGAGTGCGTCAACTGTGGAGCTATATCGACTCCTTTGTGGCGTCGGGATGGCACCGGACACTATTTGTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGAATGAACCGGCCGCTGATCAAGCCCAGCAAGCGCCTGGTGAGTGCAACTGCCACCAGGAGGTTAGGACTGCGTTGCACGAACTGTGGCACGCACACCACCACGCTGTGGAGGCGGAACAATGACGGAGAGCCTGTGTGCAACGCCTGCGGGCTATACTACAAGCTCCACGGAGTGAACCGGCCGCTGGCCATGCGAAAGGATGGCATCCAGACCAGGAAACGCAAGCCTAAGAAGTCGGGAAGCAGTTCAGCAGCGGGAACGGGAGCGGGTTCGGGATCTGGCGCCAGTGCTGCCCTGGAGGCCATCAAGGAGTGCAAGGAAGAGCACGATCTCAAACCCTCGCTAAGTTTAGAGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCCCGGCAACTCCACGGATCGACTGGATCACAGCTCTATACACCAGGCAGCAGTTCCGGCGGCGGCAGTGCATCCGCCTACACTTCGCACAGCGCCGAGACACCAACGCTGAGCAACGGCACTCCATCGCCCCACTACCAGCACCCCCACCACCACCTGGGAGGATCGCACGGCCACCATATGACGACGGCGGCCCATCATCACCTCCACGCAGCCGCAGCTGCCGCTGCCTATGGGGTGAAAACGGAAGCCAGTGCTACCAACTACGACTATGTGAACAACTGCTACTTTGGAGGATCCTTCGGGGCGCTCGGAGGTGCTGCATCCTCGGCCGCCATGGCGGGTGGAGCAGCCAGCGAACTGGCCGGCTACCATCACCAGCACAATGTCATCCAGGCGGCCAAGTTGATGGCCACCTCGTAA
- Protein Sequence
- MGILLSDGDSTSDQLSTRDYPHFGNDHHNGPLSVASSASASASGSASVSSSASAAVAAKMYHSSAVAAYTDLAAAGSAASAGVGVGVSGYHHQQAVNSPVYVPSNRQYNHVAAHFGSAAAAQNAWPTDSFGSAHAQLPAQFYTQNAAVMMSSWRNPYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLRCTNCGTHTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKSGSSSAAGTGAGSGSGASAALEAIKECKEEHDLKPSLSLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARQLHGSTGSQLYTPGSSSGGGSASAYTSHSAETPTLSNGTPSPHYQHPHHHLGGSHGHHMTTAAHHHLHAAAAAAAYGVKTEASATNYDYVNNCYFGGSFGALGGAASSAAMAGGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587800;
- 90% Identity
- iTF_00504349;
- 80% Identity
- -