Basic Information

Insect: Drosophila parabipectinata
Gene Symbol: ttk
Assembly: GCA_018153455.1
Location: JAECYA010000551.1:12774206-12777702[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-19 8.1e-16 57.3 0.0 2 45 563 607 562 607 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-19	8.1e-16	57.3	0.0	2	45	563	607	562	607	0.97

Sequence Information

Coding Sequence: ATGTCCGTGCAGCAATTCTGTCTGCGCTGGAACAACCACCAGCCCAACTTCATCTCGGTCTGTTCGTCGCTACTGCACAATGGTACTCTGGTGGACGTTACCCTGGCAGCCGAGGGACGCCAGCTGCAGGCGCACAAGATTGTGCTGTCCGCCTGCAGTTCGTACTTTCAGGCACTGTTCACCACAAATCCGTGCCAACATCCCATCGTCATACTGAAGGACGTGCAATACGATGACCTCAAGACCATGGTCGACTTCATGTACTATGGCGAGGTCAATGTGTCGCAGGAGCAGCTGCCGCACATCCTCAAAACCGCCGAAATGCTCAAAATAAAGGGCCTGGCGGAGATGCCAACGGACCCGGCCAATCTCACCAAGTCCGACAGCAAGTCCTCCACCGATGGCACAGAACTGGTGGGCGGCGGGTCCGGGGTGGGTGCCGGGCCGGGCACCTCGGCCGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCGGACACCGTCACCCCTGAGTGCTGGAACGTCGCCAGCTACGCGGCGTAAGCGATTGCGGAAATCCTCGAATAACGGCTCTGGCGAACGGAACAATGTGGCGGAGGAGCACAACAGCTCACTGGAGACCGGCGCTGGAAATGCCGGCTTGAGTCTCGCCCAGATGAGTCAAATGTCGTTTGGCGCTGGCGGAGGCCTGGCCGGGCACTCGCTGCACGCCGCCAAGCTGCTGAAGGAGTCGGCAGCCGCCGAACTGGAGCAACAGCCCCAGGACTCTGATCTGGACGACGGACACGGACACATTCACATGCAAATTAAGCCCGAGGTGGACATTGGAGGCGTGAACCAATCGATGCCGTTGGACATCTCTGGAGCCACAACCCCGTCGGAGCACGATGCGCCCAACTCTCAGTCCTCGCACTCGGGTCTGCAATGGACGGTTGTCGATTCCAACTATCCGCGCTTTTCCTTGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTACTCCTCGCAAATCATCACAGTGAACAGCTTGGTCAGCGGCTATGCGACGACGGCGCAGAACCTCTCGCCCACATCCCCCAACGAATCCAATATGGTGCAATCGGTCTACAGTCAGGGTCCCACGCCCACCCAATCGCCCGTCCACGCGGGCACCGGCGGCAGCGGGGGAAACGGAAATGCCACAGGAAACGGAGGAACAGCCGGAGCGGCCAGCCAGGTGGTGAAGCGAAAGCGGTCGGTCAACCCCCAGGGAGATGAGAACTTTATCCGAGCCCTGGAAGCAGTGCGCACGGGAGGAATAGGCTTCTGCAAGGCAGCCCGCTTGTACGGAGTAAACAACCGCACCCTGTGGCTGGAGTACAAGAAGAGGGGATATCCCGTTTCGCGGCCGAGCATCAAAGCACGGGTGGTGAAGCAGGAGCCGAATCTGTCGCCATCGCCCACACCCTCGACAAACCCGGGAGACGATAACACAAACGAGACGCTCAGCATGCAGATTCCTCCTCAAGCGGAGACGCCGACGCCCTCACTGATGTGCACGCCGCATCACACGGGCATTGGCAGTGCGGCCGGCAGTCTGCCGGGCAGTGGAAACTCCCATCCGGCCATCGGTGTGATGAGCCTGTTCGACCCGCGGTACATGGACTCACCCGGCACGGTTCACTCGATGACGCGGCAACGGTACATCGACAGCGGAGCAGGGGCTGGGGCGGGGGGTGCGGCCACCGGAGCGGGAACCGGCACCATCAATGTGAACCCGAGCACCGCCATGAATCTGCAGAGTATTAACTTCAACTCGATATAG
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSTDGTELVGGGSGVGAGPGTSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNVAEEHNSSLETGAGNAGLSLAQMSQMSFGAGGGLAGHSLHAAKLLKESAAAELEQQPQDSDLDDGHGHIHMQIKPEVDIGGVNQSMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYSSQIITVNSLVSGYATTAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGTGGSGGNGNATGNGGTAGAASQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDNTNETLSMQIPPQAETPTPSLMCTPHHTGIGSAAGSLPGSGNSHPAIGVMSLFDPRYMDSPGTVHSMTRQRYIDSGAGAGAGGAATGAGTGTINVNPSTAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615636;
90% Identity: iTF_00476000;
80% Identity: iTF_00566161;