Basic Information

Insect: Drosophila parabipectinata
Gene Symbol: ct
Assembly: GCA_018153455.1
Location: JAECYA010000055.1:4921830-4946183[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.2e-27 5.1e-23 80.7 0.0 3 72 954 1024 952 1029 0.95

2 3 3.1e-32 5.1e-28 96.8 0.0 3 77 1399 1474 1397 1476 0.96

3 3 2e-31 3.3e-27 94.2 0.0 3 76 1690 1764 1688 1767 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.2e-27	5.1e-23	80.7	3	72	954	1024	952	1029	0.95
2	3	3.1e-32	5.1e-28	96.8	3	77	1399	1474	1397	1476	0.96
3	3	2e-31	3.3e-27	94.2	3	76	1690	1764	1688	1767	0.96

Sequence Information

Coding Sequence: ATGGTTTGTCCTCCTCTAGGAGAAGAGGAGGAAACTATTTCCCAGGCAAAAAACCCCTCGAAACTGGACACAACAAGTGTCGGCATTCCCACGAGGATTTCGTCGCTGATCGATTTCGGACGCAAAAAGTCAGCCAAGAAACGACAGGACGACTGGACGACTGGAGGACTGGAGGACTGGAGGACTAGAAAGCTTAAGCAGCTCACGAAAACGAAAACAAACGTTCGCTTCGGCCGGTTCGGCGCTCTCAGGTCTCAGAACAGAGCAACCACTGAGCCCCCTCCCCAAGCCACAGGAGCCACCCACTCTTCTACCCACTCTCCCACCCACCCACTAAAGTCTGGCAGACCCGCGTGTCTGGCATTCAAGTCTCAGACGAAGGACGATACAAATGCAGCCTCCCCCTTCGCCTGCTGTCTGTTGTTTCGCGCTACCCTGGCCGAGAAGGAAGTCAATACCCTGAAGGAGCAGCTATCCACCGGCAACAGTGATACCCTCACCACCACCACCACCAACAACAACAACAACAACACAAGCACCGATAACAGCGATACATCAGCAGTAGGAGCAGTGACCCGGACAGGAGCCTCTGAGGTGGCGACAGCCAGCAGTAACCTTAATCATAGCACCGCCCAGGACGACGACGACGATGACGAGGAGGAGGAGGAGGAGGGCGAGGAGGACGAGGTGGAGGATGAGGAGGAGGACAATGCCTCGATGCAGTCGAATGCCGATGACATGGAGTTGGACGGAACGGGAGCCGGGGCCGAGACGATCGCCCCCAGAACTGAGCCAAGAACTGAGCAGGAGGAGGCGGAGGAGCTGGTACCAGGTGTGGCCACCTCCGACAAGGAGGCGGGGGCGGCGGAGGCTAGCCTAAGCGTTACCGTTAGCAATAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCAACCCGCCGTCCTATTGGCCGCCAAAGATAAAGAGATTAAGGCCCTGCTGGATGAACTGCAGCGCCTGAGGGCTCTGGAACAGACCCACCTTGTGCAGATCCAACGCCTTGAAGGACATTTGGAGGTGAAACGGCAGCACATCATCCGACTGGAGGCCCGGCTCGATAAGCAGCAGATCAATGAGGCACTGGCCGAGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCCCCACGACTCTGCTGCAGAGTCGGAGCCGGCCGTTGTTGAGGATGAGGAGGAAGAGGAGCCGGACCAGGCCATGCTAGTGGATGGTGAGGAGCAGGAGGAGAACGATGACCACGACCACGACCACGATCACGACAAGGAGGAGAAGGAGGAGGAGGAGGAGCTGGAGGAGGCCGCTGCCGAACAACGAAACGACCCATCCACCAACGAAGGCAACGAGCTCAAAATCAAAAAGGAACAGCACAGTCCGCTGGATCTGAATGTGCTCAGTCCACAGTCGACGATCGCTGCTGCTGCCGCGGCCGCAGCTGCCGCCGCCTGCGCCAACGATCCCAACAAGTTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCTGAGGCGCTAAAGAACGGTACCGTTGACACCGCCGCCAACGAAGAGACGAGTCCGCCGGATCCATTGCCGGATCCATCGCTGGCCACCAAACAGGAGGTCGTGACCGATGAGCACGATGAGGATGACCACCTGGCCACCACACTAGTCAGTGGTACTGGCTATTGGCGACGCGGTTTCGAGCCGGAGTCCACCGGAGTCTCAAAGTCCGGGAGCAGGCCACTGTTGCCGCCACCTCCGCCTCCGCCTCCACTGCCTCCGTTGCCGCATTATGGCCCTCCGGCTGCCACGCCTCTTTATCCCCCGCCACAACAACAACAACAACAACAGCATCAGCAACAACAACAACAGCAACATGGACCCTCGTCCACCGCCTTGCTGAGCCAACTGGTTAATTCGACATTTTCCAACTCCAACCCCTCTTCTTCCTCCACCCGCCTAGATGGAAGCAGCCACTCGCAGCCGCATCCTCAGCCCCCGCACCATCATGCCCAGCACCCGCAACACTCACAGCACCCCCATCCGGCCGCCAGCCAGCCGAATCCCGCGGAGAATCATCACCACCACCTGCACCTGCTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGGCCAGCAACGGTGCCAAGGCGGCCCAGATGCTTCAGGATCCGGAGTCGGCCGCCGCTACCGCCACCGCCAATGGGCTGGCCGCTGCCGCCATGGCCGCCCATGCCCACGCCGGCTTCCTGCCTGGCCTCTCACCGGCCTTCCAGTTTGCGGCTGCCGCTGCTGCTGGCCAGGATGCCCGTGGCCATTACCGGTTCGCCGATGCGGAGCTGCAACTGCCACCGGGCGCCTCGATGGCCGGCCGGCTGGGCGAATCCCTCATCCCCAAGGGCGATCCGATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGGCCCTGGACACCCTACACATCTCGCGCCGCGTCCGTGAACTCCTCTCCGTGCACAACATTGGCCAGCGGCTGTTCGCCAAGTACATCCTGGGCCTATCGCAGGGCACCGTCTCGGAGCTCCTCAGCAAACCGAAGCCCTGGGACAAGCTAACCGAGAAGGGTCGGGACAGCTACCGGAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTGCTCAAGTCGCTGATACCCAAGAAAGACTCTGGCCTTCCCCAGTACGCTGGCCGAGGCCCCGGCGGCGGAGGCGACGACTCCATGTCCGAGGACCGTATCGCCCACATCCTGAGCGAGGCCTCGTCGCTGATGAAGCAGTCCAGTGCCGCCCAACAGCAGCGCGATCACGGACGCGAGGACTCCCACAGCAACGAGGACAGCAAGTCGCCGCTCCAGAGCTGCACCTCGCCCTTCTTCAAGGTGGAGCAGCAGCTGAAGCAGCAGCACCTCACTCCAGAGCAGGCCCAGCAGCAGCGGGAGCGTGAGCGCGAAAGGGAGCGCGAACGGGAACAGCAGCAGCGCCTGCGGCACGAGGATCTCGCCCAGGACAAGATGGCTCGGCTCTACCAGGAGCTTATTGCCCGCACTCCCCGTGAGACGGGTTTCCCCAGCTTCCTGCTGTCGCCCTTCTTCGGAGGAGCAGCCGGCATGCCAGGAGCAGCCGCCAACGCCTTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGGCACGCCTTCGAGCGGGAGATCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAACTTCTCCAGCCTGATGGCCCTGCAGCAGCAGGTGCTCAACGGCGCCCAGGATCTCTCCCTGGCCGCCAAGGAGATCAAGCTGAATGGCCAGCGATCCTCGCTGGAGCACAGTGCCGGCAGCAGCAGTTGCTCCAAGGATGGCGAGCGCGAAGACAACTACGCCGCATCCCTGCACGGCCTCAAGTCGGAGGGAGGTGGCACACCAGCTCCGCCCTCGGTGGGACAGCCCCCATTGACGTCCTCTGGTGGACCAGGAGCCGGTGGAGCTTCCGGCGGTGCCGGTAGCAATTCGGCTGCCCCCAGTCCGCTGAGCAACTCCATCCTGCCACCGGCGTTGAGCAGCCAGGGCGAGGAGTTCGCGGCCACAGCAAGCCCGCTCCAGAGGATGGCCTCGATCACGAACTCTCTGATCACCCAGCCCCCGGTGACGCCCCACCACAGCACGCCCCAGCGGCCGACCAAGGCGGTCCTGCCGCCAATCACCCAGCAGCAGTTCGACATGTTCAACAACCTCAACACGGAGGACATCGTGCGGCGGGTGAAGGAGGCCCTCTCCCAGTACTCGATATCGCAGCGGCTCTTCGGCGAGTCCGTGCTGGGCCTATCGCAGGGATCCGTCTCGGACCTGTTGGCCCGGCCCAAGCCCTGGCACATGCTGACCCAGAAGGGGCGCGAACCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAACGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCCGAGAAGCTGATGCGCACCGGCAGCTACAGCGGCAGCCCCCAGATGCCGCAGGGCTTCGCCTCCAAGATGCAGGCCGCCTCGCTGCCCATGCAGAAGATGATGAGCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCTGACCTCGCCGGGTCTTCCACCCCAGCACGCCATCAGCTTGCCGCCCGGCGGAGGCAATGCCAGCGGTGCCGGTTCCGGTTCCGGAGTGGCTCCGGGCGGAGCACCCAGCGCAAACAATGCCAGTCCCGCCGGTGGCGGTAGCGCCGAGAAGAAGCCCATGCTGATGCCCGTCCATGGTGCGAATGCCATGCGAAGCCTCCACCAGCACATGTCGCCCACCGTCTACGAAATGGCCGCCCTCACCCAGGACCTGGACACCCACGACATCACCACCAAGATCAAGGAGGCCCTGCTGGCCAACAACATCGGCCAGAAGATATTCGGCGAGGCGGTCCTCGGACTCTCGCAGGGCTCCGTCTCCGAACTGCTGAGCAAGCCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCCTTCATCCGGATGCAGCTCTGGCTCAGCGATGCCAACAACGTGGAGCGGCTGCAGCTGATCAAGAACGAGCGGCGCGAGGCCTCCAAGCGGCGGAGGAGCACCGGTCCGAACCAGCAGGACAATAGCAGTGACACCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGACCCGGATCCGTGGGCAGCGGCGTGGGCGGTGCCCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTCCGAGGAGCAGAAGGAGGCCCTGCGCTTGGCCTTTGCACTCGATCCGTATCCCAACGTGGGCACCATCGAATTCCTGGCGAACGAGCTCGGCCTGGCCACCCGGACGATCACCAACTGGTTCCACAACCACCGCATGCGCTTGAAGCAGCAGGTGCCGCATGGCCAGCCCGGCCAGGACAACCCCATTCCCAGCCGCGAGAGCACCAGTGCCACGCCCTTCGATCCCGTCCAGTTCCGCATCCTGCTGCAGCAGCGCCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGCGCCCCGATCCCCTATCCGCCGTACTTTGCCGCCGCCGCCCTGCTGGGCCGCAGCCTGGGGATTCCCGGAGCCGCGGCAGCTGCCGGAGCAGCGGCTGCAGCAGCGGCAGTGGGTGCCGCCGGCTCGGGCGGAGCCGATGAGCTGCAGGCCCTGAACCAAGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTCTCCATGCCCAGCCTGAAGCGCGAGCGCAGCGGCGACTACCAGGACGACATGGAGCACAATCTGAGCGACAACGAGAGCCTGGAGGGCTCCGGCGGCCAGGATGGTGACCTGGACAAGACCGGGGGCAGCACCGACTACGAGAAGGTTCTCCACAAGTCCGCCCTCGCCTCGGCAGCGGCGGCCGCCGCCTACATGTCGAATGCGGTTAGGAGCTCCCGCCGCAAGCCTGCAGCGCCCCAGTGGGTGAATCCCGCCGGTGCCGGAGGACCTGCCGCCAATCCCGTGGTGGCCGCCGCCGTAGCAGCAGCCGCCGCAGCAGCAGCGGCCGCCGAGGGCGAGCGGATCATCAACGGGGTGTGCGTAATGCAGCCCTCGGAGTACGGAGTGCGTGGCGAGGAGAGCGAGGGCAAGGGCGGCGAAGACTCCTCCATGGGAGGCGGCGATGCCGAGCTAGAGATCGACCAGAGCTTCATGGAGCCGGAGGTGAGCATCAAGCAGGAGGAGGACGACGACGAGGAGGAGGAGCCGGCCCAGGCGCATCCCCTCCTGGAGGGCACCGCCGAGGAGGCTGCCGAGCAGAAGCTCAAGGTCGTCAACGAGGAGAAGCTGCGCATGGTGCGCGTCCGCCGCCTCAGCAGCAACACCGAGGAGTCCGCCGTGGGAGACTCAGCCAGTGGAGCCTCCAATCCCGCCGCCTGTTCCCCGCCAGCCGGTAACGGCAGTGGAGCTGGAGTCGGAGCCGGGGCTGGCTGGACCTATTAG
Protein Sequence: MVCPPLGEEEETISQAKNPSKLDTTSVGIPTRISSLIDFGRKKSAKKRQDDWTTGGLEDWRTRKLKQLTKTKTNVRFGRFGALRSQNRATTEPPPQATGATHSSTHSPTHPLKSGRPACLAFKSQTKDDTNAASPFACCLLFRATLAEKEVNTLKEQLSTGNSDTLTTTTTNNNNNNTSTDNSDTSAVGAVTRTGASEVATASSNLNHSTAQDDDDDDEEEEEEGEEDEVEDEEEDNASMQSNADDMELDGTGAGAETIAPRTEPRTEQEEAEELVPGVATSDKEAGAAEASLSVTVSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEGHLEVKRQHIIRLEARLDKQQINEALAEAXXXXXXXXXXXXXXXXXXXXXXXLPHDSAAESEPAVVEDEEEEEPDQAMLVDGEEQEENDDHDHDHDHDKEEKEEEEELEEAAAEQRNDPSTNEGNELKIKKEQHSPLDLNVLSPQSTIAAAAAAAAAAACANDPNKFQALLMERTKALAAEALKNGTVDTAANEETSPPDPLPDPSLATKQEVVTDEHDEDDHLATTLVSGTGYWRRGFEPESTGVSKSGSRPLLPPPPPPPPLPPLPHYGPPAATPLYPPPQQQQQQQHQQQQQQQHGPSSTALLSQLVNSTFSNSNPSSSSTRLDGSSHSQPHPQPPHHHAQHPQHSQHPHPAASQPNPAENHHHHLHLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASNGAKAAQMLQDPESAAATATANGLAAAAMAAHAHAGFLPGLSPAFQFAAAAAAGQDARGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGPGGGGDDSMSEDRIAHILSEASSLMKQSSAAQQQRDHGREDSHSNEDSKSPLQSCTSPFFKVEQQLKQQHLTPEQAQQQREREREREREREQQQRLRHEDLAQDKMARLYQELIARTPRETGFPSFLLSPFFGGAAGMPGAAANAFPAAMAADENMRHAFEREIAXXXXXXXXXXXXXXXXXPNFSSLMALQQQVLNGAQDLSLAAKEIKLNGQRSSLEHSAGSSSCSKDGEREDNYAASLHGLKSEGGGTPAPPSVGQPPLTSSGGPGAGGASGGAGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGFASKMQAASLPMQKMMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTSPGLPPQHAISLPPGGGNASGAGSGSGVAPGGAPSANNASPAGGGSAEKKPMLMPVHGANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLGIPGAAAAAGAAAAAAAVGAAGSGGADELQALNQAFKEQMSGLDLSMPSLKRERSGDYQDDMEHNLSDNESLEGSGGQDGDLDKTGGSTDYEKVLHKSALASAAAAAAYMSNAVRSSRRKPAAPQWVNPAGAGGPAANPVVAAAVAAAAAAAAAAEGERIINGVCVMQPSEYGVRGEESEGKGGEDSSMGGGDAELEIDQSFMEPEVSIKQEEDDDEEEEPAQAHPLLEGTAEEAAEQKLKVVNEEKLRMVRVRRLSSNTEESAVGDSASGASNPAACSPPAGNGSGAGVGAGAGWTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00538753;
90% Identity: iTF_00565981;
80% Identity: iTF_00565981;