Dosh000763.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- pnr
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000213.1:1363964-1369757[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-18 1e-14 53.8 3.2 1 34 167 199 167 201 0.97 2 2 2.4e-19 8.5e-16 57.2 6.7 1 35 224 257 224 258 0.98
Sequence Information
- Coding Sequence
- ATGGGCATTTTACTGAGTGATGGCGATTCCACGTCAGATCAGCAGTCGACACGGGACTATCCGCATTTCAGCGGCGACCATCAGACCGTGACCTTGCCGGTTGCCTCTGGATCCGCATCCGTATCCGCCTCCGCCATCAAGATGTACCACAGCAGTGCCGTAGCGGCGTACACGGACCTCGCTGCCGCCGGGAGTGCGGCCAGCGCCGGAGTCGGGGTGTCCGGCTACCACCACCAGCAGGCCGTGAATGCTCCGGTTTACGTGCCCTCCAACCGCCAGTACAACCACGTGGCCGCGCATTTTGGAAGCGCGGCGGCGCAGAACGCCTGGACCACGGACAGCTTTGGATCCGCGCATGCGCAGCTGCCGGCGCAGTTCTATACGCAAAACGCCGCCGTGATGATGGGCTCCTGGCGCAGCGCCTACGATCCTACGGGCTTTCAGCGCTCCTCGCCCTACGAGAACGCCATGGACTTCCAGTTCGGCGAGGGACGCGAGTGCGTCAACTGTGGGGCCATATCGACGCCCTTGTGGCGGCGTGATGGCACTGGGCACTACCTGTGCAACGCCTGCGGACTGTACCACAAAATGAACGGGATGAACCGGCCGCTGATCAAGCCCAGCAAGCGCCTGGTGAGTGCAACTGCCACCAGGAGGCTGGGCTTGTGCTGCACCAACTGCGGCACCCGCACCACCACGCTCTGGAGGCGCAACAATGACGGGGAGCCCGTGTGCAATGCTTGCGGCCTGTACTACAAGTTGCACGGGGTCAACAGGCCACTGGCCATGCGCAAGGATGGCATCCAGACCAGAAAGCGAAAGCCCAAGAAAACGGGCAGCAGCTCAGCGGGGGGAACGGGTTCGGGATCCGGATCCAGTTCCACTCTGGAGGCCATCAAGGACTGCAAGGAAGAGCACGATCTCAAGCCCTCGCTTAGCCTAGAGCGAGCACAGCTCTACACGCCCGGCAGCAGCTCCGGCGGAGGTAGTGCGTCCGCCTACACCGCGCACAGTGCTGAGACGCCGACCTTGAGCAATGGCACACCTTCGCCCCACTACCAGCACCACCACCACCTGGGCGGATCCCATGGACACCATGTGACGGCGGCAGCCCATCATCACTTACATGCAGCCGCCGCTGCAGCCGCCTACGGAGTGAAAACAGAGGCGAGTGTCACCAACTACGACTATGTTAACAACTGCTACTTTGGGGGCACTTTCGGGGCTCTGGGCGGAGCAGCATCCACGGCAGCCATGGCAGGAGGAGCGGCCAGTGAGCTGGCCGGCTACCATCACCAGCACAACGTCATCCAGGCGGCCAAGCTGATGGCCACCTCGTAG
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPHFSGDHQTVTLPVASGSASVSASAIKMYHSSAVAAYTDLAAAGSAASAGVGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMGSWRSAYDPTGFQRSSPYENAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSSSAGGTGSGSGSSSTLEAIKDCKEEHDLKPSLSLERAQLYTPGSSSGGGSASAYTAHSAETPTLSNGTPSPHYQHHHHLGGSHGHHVTAAAHHHLHAAAAAAAYGVKTEASVTNYDYVNNCYFGGTFGALGGAASTAAMAGGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00515910; iTF_00611720; iTF_00484780; iTF_00487668; iTF_00486965;
- 90% Identity
- iTF_00486965;
- 80% Identity
- -