Basic Information

Insect: Drosophila oshimai
Gene Symbol: -
Assembly: GCA_018150695.1
Location: JAECWM010000003.1:811559-815533[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00015 0.011 16.1 1.2 1 23 166 189 166 189 0.96

2 13 0.0016 0.12 12.9 3.1 2 23 238 260 234 260 0.90

3 13 0.006 0.45 11.1 0.2 1 23 350 373 350 373 0.93

4 13 0.41 30 5.3 4.4 2 23 422 444 421 445 0.94

5 13 0.00061 0.045 14.2 0.4 1 23 515 538 515 538 0.92

6 13 1.8 1.3e+02 3.3 0.1 2 14 557 569 556 581 0.85

7 13 0.00062 0.046 14.2 3.3 2 23 589 611 589 611 0.96

8 13 0.048 3.6 8.2 0.1 1 20 699 718 699 720 0.95

9 13 0.001 0.074 13.5 0.2 1 23 754 777 754 777 0.93

10 13 0.0022 0.16 12.5 1.5 2 23 827 849 826 849 0.95

11 13 0.016 1.2 9.7 1.7 1 23 941 964 941 964 0.91

12 13 0.026 2 9.0 1.2 1 21 1016 1036 1016 1037 0.95

13 13 1.3 94 3.7 0.3 3 23 1069 1092 1067 1092 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00015	0.011	16.1	1.2	1	23	166	189	166	189	0.96
2	13	0.0016	0.12	12.9	3.1	2	23	238	260	234	260	0.90
3	13	0.006	0.45	11.1	0.2	1	23	350	373	350	373	0.93
4	13	0.41	30	5.3	4.4	2	23	422	444	421	445	0.94
5	13	0.00061	0.045	14.2	0.4	1	23	515	538	515	538	0.92
6	13	1.8	1.3e+02	3.3	0.1	2	14	557	569	556	581	0.85
7	13	0.00062	0.046	14.2	3.3	2	23	589	611	589	611	0.96
8	13	0.048	3.6	8.2	0.1	1	20	699	718	699	720	0.95
9	13	0.001	0.074	13.5	0.2	1	23	754	777	754	777	0.93
10	13	0.0022	0.16	12.5	1.5	2	23	827	849	826	849	0.95
11	13	0.016	1.2	9.7	1.7	1	23	941	964	941	964	0.91
12	13	0.026	2	9.0	1.2	1	21	1016	1036	1016	1037	0.95
13	13	1.3	94	3.7	0.3	3	23	1069	1092	1067	1092	0.83

Sequence Information

Coding Sequence: ATGGAGGGCATGGATCTGTGGACGTCGATGTTCTCCTCCGATTACGACGAGGGCGAGCCGGACGGTGGGGAAGGCGAGCTGGAGGTGGAGGGCAGCGAGCATTACGGCAATGGCAACGACGACTTTCTGGGCGACTCGGAAATCCTGGACGCAGGCGATGCTATTGACGACCTCCTGGATGGCGACGAGGATGACAGGGAGGAGGATGAGGAGTACGAGGTTGGAGCAAAGGGACCTAAGAGACCCGAGCCCGACGACGATGCCCTCTTCGATTTCGAACTGGAGCCGATTTTGAGCATTGGGGAGCAACAGCAGCCGCTTCTGGCTCCTGCTGGTCCAATGGGCGCCCAAGTGCGTCCCGTTATGCAACGAAACTCGCTTCCAGGTACTCTGGGAAGGCCGCGCACCTCTGGGTTGTCCGTTCGCCCCACCACCTCTCAGATCAACGCCACGGATGAGAACGGAGTGCCCATCAACTACGAGCTGGGCGTGGTATACATCTGCCCCGCCTGTGGTGGCGAGTTCCGGCAGCAGGACCACTGGAAGCGGCACATGAACCACATCCACAGGTACAACACACTGCGGGGCCTCAATTTTACCCCGCTAGACAAGTTGTACCAGCGCTGCAAGGAGTGCAACAAGCGGATCGCCATGCACAGCCGGGAGAACCTGCTGAAGCACAAGTTCACTCATCTTCCGTTCCGGTGCACCAAGTGCTACATCTGCAAGCGGGAGTACAAATACAGGCAAGATCTGATGGTGCACTTGCGGATGGTCCACTGCGATGAGGTGGTGGCCATGATGCGGGAGGGCTACAACGCGGCAGGACGCAAAACTCGCGTCCGGGAATCGCGCACCGAGCAGATGCAGCGAGAAAAGGGCTTTCACGTGGATGATGACCTGGATCGCATCGAGGTGCGAAACGAGCTGCTCGAGCCGGATGGCGATGACCCTGTTGTCTTGGAGCAGCCTTCCACGGAGGAGGTGACAAAGAAAAAGACTCCTGGCAGTCGAGGAGCATCCGAGCTGTGCGAGGACTACATCCACTACATGTGCCCCGACTGCGGCACTGAGTGTGACACCCTTGCCCAGTGGAGCCAGCACATCGAGTTCGTCCACGACTACGTCAGTCGGCGTGGACTCAACTTTCGAAGCGTGGACATGCAAATGCAGTGCCTAGAGTGCAAGAAGATTGTTGCTCCCAACACCATCAAATCACTGCGCGCCCACAAGTTCAGCCATTTGTCGCAGCCTGAGTGGGTGCGCTGCAAACTCTGCTACAAGGGTTACTCGGATCATCAGGATGTAATCAAGCATTTGCTGCATCAGCACCATCTGAACACGCTGATGACAGAGGACGCCGAGGAGGAGGATGCTTTAGCGGCCATTGTGGCGGAGGACGAATGCGAGGACAACGGAAACGGAGGGGAACACGGCGAGGGAAACGGTGCCGTCTTGGACGAGGACTCACCCTACTTTGAAGACGCCCCCAGACGCGGCGGTCGCATTAGCAGCGACGACATGTACGAACCGCACATCGACTACCTCTGTCCGCAGTGCGGCAAGGAGTTCATCGAGAAGAAGCACTGGCGCACCCACGTGGTCATGGCGCACAATATGAACGATCTGACTAAGCTAAACTTCGAGATGATCAGCGAGCGGCAGCTAAAGTGCACCGAGTGCGATAAGATCATCACGAATGCCTATGGAATCCAGAATGCCCAGCAGCACAGGATCACTCATCTGCCATTCAAGGCGTACGCCAGGTGTCGCAAGTGTCATAAGTCCTACACGGACAGAAAGGGTCTTGTCAAGCATCTGGCTACCTACCATCGCGTTGGTTGTGGGCCACGAAAGCCCGGAGGAGGACTTGGTGGACCAGCACAGCTGCCCACCCCGCCCAAGCAACCGCGCAAGCAGATAGTGACGGTAGCCAATGAGACGTACGAGATAATCTACCTGGACGACCTGGAGCAGAGCTGCATGGAGGAGGACAACGACTTTGGCGAACAGATGCAGGCGGATGAGGAAGACTACCCGATTGCGCCGCCTCCACCACCGCCGCCGCCACCCTCGCAAAGCAGCCAGCACCGCTACAAGTGCGTCCACTGCAGCACTCTGTTTCCCACCCAGGCGGCTGTCCGGATTCACATTAGTGAGAAGCGTTGCAGAAGGGGCAGTGCAATGGGAAGAAGGCATCGACAGGCCACACCGATGGCGGTGGACCCATCTGTTCCCACCGTCGAGCAGAACTACATTTTCCTGTGTCCCTCCTGCGGCATGGAGTACAAGACGCAGTTCGAGTGGCGGCGTCACATCAACGAGGTGCACAACTTTGATAAGCGGCAGTATCTTAACATGCGGCAGATGGACAAGTATCGCTACCAGTGCACCCAGTGCAAGGACATTGTGTGCAACTCGAAGCTGAAGGGCTTGCAGGACCATCACTTTCGCCACCTGCCATATCGGCTGTATCTAAAGTGCCTAATCTGCGGCACCTGCTACAACCACAAGCCGAACATAGCTGCCCATTTGCGAGCTCGCCACAGCATCTACGACAGGGATACGACACCAGTGATGATCACCAAGCCGAAGCACGTGTACAGCCGCTACAAGGAAAGTAACAGGGAGAAGCCCAGGCTGCCCTCTCCTGCTCCAGCAGCACCTTCTCCACCGAGCTGCTCCTCTTCGGCTGCCTCCTCTGCGGGGAGTCGCTCCCTTAAACCGCAGCCCGGTGGCCTGCCAACGCGACCCGCAGGGCTCAACACGCTAGAGGACAGCATATCCTACCACAATGCCGTGGATTTGGACTTTATCACCTACTTTTGCCCGAAGTGCAACCAGAACTTTGAATCGCACGCCTTCTGGCGCAAGCACATCGTGGAGCAGCACAACTTTAACAGTCGCGAAGGTCTTAACTTCCGCCAGATCGACAACCATCACTACCTGTGCCTGGAGTGCTACAAGCGGGTAACCGTCACCCACACCAAGGGTGCCATCGGGCAGCTGCAGTCGCACAAGTTCCGCCACCTGCCGCACCGCTCCTTCAAGTGTCTGACCTGCGACGGCGAGTTTGTGCGCAAGCAAATGTTCTTCAAGCACCTGAACCGCGACACCAATCGGTGTGACAATCGCCCGCACCGAGACTTAGATGAGGATGAACCTGAACAGGAGCCTCAGCTGCGTTCCATCTACCACCTGGCGTGTCCGCAGTGCGGCGATAATTTCACCACCCGCAACAGGAGGCAGTGGCGCGAGCACATCAACGACTATCATGGACTGGCTAAGCTGGACCTTTTGCATATGAGCAAGGTGAGTGAGGATGTCTACCGCTGCCAGGACTGTGACGATGAGCTTCAGACGAAACGGCAGTGGGTGCTGCAGTTCCACCGGTTTCAGCACCTGCCCCACCCAGCCTACGTTCGTTGCAAACTATGCAAGCAGAGCGGCGAGGCGGGTTCAGTAGGAGCCGGCGAGCTACACAGCCTGCGTGAGCTGCAGCAGCATCTTCGTAAGCACCATCCAACGGTGGGGGAAAGCGAGATGACAACACTCCGCGAGCAGATCGTCCAGGAGGAGAAGGAGCAAGAGGAGGCATCGGATCTGCCTGCAGAAGAAGACGACCAAGCTGGTCAGAACTCAGGGCCGTATATGCCGCTGCCACCTCATTTACTGGACGATGGGGACGACGTGGAGTTCGAGGACCAGTATCTGCTGGGCTAG
Protein Sequence: MEGMDLWTSMFSSDYDEGEPDGGEGELEVEGSEHYGNGNDDFLGDSEILDAGDAIDDLLDGDEDDREEDEEYEVGAKGPKRPEPDDDALFDFELEPILSIGEQQQPLLAPAGPMGAQVRPVMQRNSLPGTLGRPRTSGLSVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHMNHIHRYNTLRGLNFTPLDKLYQRCKECNKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGYNAAGRKTRVRESRTEQMQREKGFHVDDDLDRIEVRNELLEPDGDDPVVLEQPSTEEVTKKKTPGSRGASELCEDYIHYMCPDCGTECDTLAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVAPNTIKSLRAHKFSHLSQPEWVRCKLCYKGYSDHQDVIKHLLHQHHLNTLMTEDAEEEDALAAIVAEDECEDNGNGGEHGEGNGAVLDEDSPYFEDAPRRGGRISSDDMYEPHIDYLCPQCGKEFIEKKHWRTHVVMAHNMNDLTKLNFEMISERQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRVGCGPRKPGGGLGGPAQLPTPPKQPRKQIVTVANETYEIIYLDDLEQSCMEEDNDFGEQMQADEEDYPIAPPPPPPPPPSQSSQHRYKCVHCSTLFPTQAAVRIHISEKRCRRGSAMGRRHRQATPMAVDPSVPTVEQNYIFLCPSCGMEYKTQFEWRRHINEVHNFDKRQYLNMRQMDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRARHSIYDRDTTPVMITKPKHVYSRYKESNREKPRLPSPAPAAPSPPSCSSSAASSAGSRSLKPQPGGLPTRPAGLNTLEDSISYHNAVDLDFITYFCPKCNQNFESHAFWRKHIVEQHNFNSREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCDGEFVRKQMFFKHLNRDTNRCDNRPHRDLDEDEPEQEPQLRSIYHLACPQCGDNFTTRNRRQWREHINDYHGLAKLDLLHMSKVSEDVYRCQDCDDELQTKRQWVLQFHRFQHLPHPAYVRCKLCKQSGEAGSVGAGELHSLRELQQHLRKHHPTVGESEMTTLREQIVQEEKEQEEASDLPAEEDDQAGQNSGPYMPLPPHLLDDGDDVEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -