Basic Information

Insect: Drosophila oshimai
Gene Symbol: RREB1
Assembly: GCA_018150695.1
Location: JAECWM010000001.1:4871663-4877945[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.026 1.9 9.0 0.8 1 21 169 189 169 191 0.93

2 12 0.0027 0.2 12.2 0.1 1 20 201 220 201 222 0.94

3 12 1.5 1.1e+02 3.5 3.7 2 19 315 332 315 334 0.97

4 12 0.0065 0.48 11.0 0.1 1 23 475 497 475 497 0.97

5 12 9e-06 0.00067 19.9 0.7 1 23 507 529 507 529 0.99

6 12 0.00061 0.045 14.2 2.0 1 23 535 558 535 558 0.97

7 12 0.0022 0.16 12.4 2.0 1 23 831 854 831 854 0.95

8 12 6.3e-05 0.0047 17.3 0.3 2 23 1231 1252 1230 1252 0.97

9 12 0.11 7.9 7.1 6.3 1 23 1258 1281 1258 1281 0.97

10 12 5.7 4.2e+02 1.7 2.0 1 23 1347 1370 1347 1370 0.83

11 12 0.0062 0.46 11.0 0.5 3 23 1419 1439 1417 1439 0.96

12 12 0.001 0.076 13.5 4.8 1 23 1445 1467 1445 1467 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.026	1.9	9.0	0.8	1	21	169	189	169	191	0.93
2	12	0.0027	0.2	12.2	0.1	1	20	201	220	201	222	0.94
3	12	1.5	1.1e+02	3.5	3.7	2	19	315	332	315	334	0.97
4	12	0.0065	0.48	11.0	0.1	1	23	475	497	475	497	0.97
5	12	9e-06	0.00067	19.9	0.7	1	23	507	529	507	529	0.99
6	12	0.00061	0.045	14.2	2.0	1	23	535	558	535	558	0.97
7	12	0.0022	0.16	12.4	2.0	1	23	831	854	831	854	0.95
8	12	6.3e-05	0.0047	17.3	0.3	2	23	1231	1252	1230	1252	0.97
9	12	0.11	7.9	7.1	6.3	1	23	1258	1281	1258	1281	0.97
10	12	5.7	4.2e+02	1.7	2.0	1	23	1347	1370	1347	1370	0.83
11	12	0.0062	0.46	11.0	0.5	3	23	1419	1439	1417	1439	0.96
12	12	0.001	0.076	13.5	4.8	1	23	1445	1467	1445	1467	0.99

Sequence Information

Coding Sequence: ATGCTTGCAGCACAGCAGCAACAGCAGCAGCAGCACAACAAGAACACAGCGGACACTGAGATGGAGCGCCAGCGACGGGACTCCACCACATCGGAGTCCTCTCTGGAGCACCTGGACCTGGGAAGGACACCCAAGAAGCTGGGCGCCGCCAGTGGAAACGGCCAGTCCACATCCACGCCACACGAGCTGGCTGTGACGTCGCGCAAGCGCAAGCTGCGACAGTTGCAGCAGCAACACCAGCAGCTGCAGCACCTCAGCGACGAGGACGAAGAAGACGAGGAGGAGGATGAGAAGGAGAAGGAGAAGGAGGAGCAGGTGGGTGCCCGCAACCTGGGGCGGCACAAGCAGCGCCGCAGTGCTGCCCAGGCCAGCATTGTGGTGGACTACAGCAGTGGGGATGCCAGTTCGCTGCGCAAGAAGTTCCGCTTGAATCGCTCGGCTGCGAGGAACCTGTGCCTCTCGAGCGGCGAATCTGGCATCGGAGCCGGCGATGAGCACATGAAGTACCTGTGCCCCATCTGCGAGGTGGTCTCGGCCACGCCCCACGAGTTCACCAACCACATCCGGTGCCACAACTACGCCAATGGCGACACGGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTATCCTCGGCTTCATCCCTGGACAGACACACCACCATCAACAACAATGTCATCTCCATGGAGAGCCAGGATGATCTGGAGGAGGAGGATGAGGAGGCCGACGATGCGGATGTGGCCATGTTGACCAGCACTCCCGATGTGGCTACACTGCTGGCGGGAGCCAGTGCCTCCGGTGCAGCCTCGCGATCGCCCTCGCCCTCCCCATCCGCCTCGCCCACCCTGCTCCTGAGCTGTCCCGCCTGCGGAGCCTCCGAATTCGAGACCCTGCCCGCCCTGTGCGCCCATCTGGATGCCAGGCACTCGGACATCCCAGCCAAGTGCCGCGACTGCGAGGTGATCTTCGCCAGCCATCGCCAGCTGCAGGCCCATTGCTGTCGTGGTGCTGGGGGATCGCTGCCTCCACTCCTTGGCGCCAGCAGTTCACCCCTGCACGGGGATGAGGATGAGGAGGAGGAGGATGCTGACCGGGAGGACCGGGAGGAGCTGGAACAGAAGCGCGAGGACTTCTTTCACCAGCTCTACCTTAAGGGAAAGGCTGGAGCCAACAGTGGCGCCAACATCTCGCACCCGCCGTCGCCCATCAAACACGAACCGGCGGACAGCAAGGATCTGGCCGACATACAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCAGCAGCTTCCTGCGCAACTTCGAGCAGTCGGTGAACACCCCCAGCTCCAGTCAGTACAGCCTGGATGGCCGCGATCAGGAGGAGGAGGCCCAGGATGCGTTCACCTCGGAGTTCCGCCGGATGAAGCTGCGCGGTGAGTTCCCCTGCAAGCTATGCTCGGCGGTGTTCCCCAATCTGCGCGCCCTCAAGGGACACAATCGGGTGCACTTGGGTGCAGTGGGTCCGACCGGCCCCTTCCGCTGCAACATGTGTCCCTATGCCGTCTGCGACAAGGCGGCTCTGGTGCGGCACATGCGCACCCACAACGGGGATCGACCGTATGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGCCATTTGAGGAATCGTCACGGGAAGACCAGTCGCGAGGAGGTCAAGCGGGCCATTGTCTATCATCCGGCCGAGGATGCGTCCGGCTGCGGCGAGGACAGCAAGTCCCGTTTGGGTGAGGACCTGGGCGACATGAGTTTCCGCTCCATCAGTCCCACTCCACCGCCACCACTGTTACCACCATCATCCCTGCCAGCGGAGGGCAGCTCCCAGCTGAAGCACATGCTCATGGGTGAGCCAGTAGTCGCGCTCTCCCAGCAGCACCAGCCACCCCTCAAGATCCAGGTAAAGAGTCTCGATCAGCTGGTGGACAAGAAGCCCGCACCCGTTCAGCCCCAGGAGAAGAGCTCCTCCGCCTCCTCCTCCGCTCTGGACTTTAGCATGGATGTGCTGGATCTCAGCAAGAAGCCAACGACTCCCTCGGTTACTCGTGTACCCACGCCCTCCGCTGCTGCAGTTCCTCCGTTAGCTGGAGTTGCTGGAGTTACTCCCGATCTGAGCGCTGCCTTGGAGCAGCAACAGTTGCTGCTGGCGCAGCAGCAGCTCTTTGGAGCTGGTGGAGATGCCGCCTCGCAGTACATGCAGCAGTTGTTCCGCAGCCTGATGTTCCAGTCGCAGACACCCGGGTTCTCCTTCTTTCCGTTCATGGCCCCACCGCCGCCACAAACGAATCCGGAGAAGCCGCCGCTGGTGAGTCCACCGTCACGCATGAATCCCATGCCCGTGGGAGTGGGTGTTGGTGTGCCAGTGCCTCCCGGTGGTCCCGTCAAGATGGTGATCAAGAACGGAGTGCTGATGCCCAAGCAGAAGCAGCGTCGCTATCGCACCGAGCGTCCCTTTGCCTGCGAGCACTGCTCGGCGAGATTCACCCTGCGCTCCAACATGGAGCGACATGTGAAGCAGCAGCATCCACAGTTCTACGCCCAGCGACAGCGCAGCGGCCACCACGTGATGCGGGGCAGAGGAGCCTCCAATGCCGCCGCCGCTGCCGCCGCTGCTGCTGCGGCAGCTGTGATGAGCCAGGTGCCCGGTGGAGGCTCCGGAGGGGGATCGGCTCACCATGGCCATGGCCATGGACATTCTCATGGACATGCTCCCATCTCGGAGCAGGTGAAGTACGCCATTCTGGCCCAGCAGCTGAAGGCCCACAAGAACACCGATCTGCTGCAGCAGGCCTTGGCCCATGGCTCCAGCTCCGTGGCTGGCAATCCCCTGCTGCATTTCGGCTACCCTGGACTGGCCACACCCACTGGCCACCACCTGGTCAATGGAGGAGCCCAGGGTAATGGCCAGACCATGACCATGGACGATGATGAGCCGAAGCTGGTCATTGACGAGGATGAAAACGAGCCCGATCACGAGGCGGAGCCGGAAGACGTGGACGATTTCGAGGAGGACGAGGACGAAGAGGAGGATGAGCCCGAGGAGGAGCCGGAGTTGATCCAGGAGGAGCCCCAGCACGAGGGGGAACAGGAGGAGGATGAGGAGGAGGAGCTTCCCAAGCCACTGGAGCAGCTCTCCACTCAACTGTCTGTCACTCCCAATGAGGCTGCCCAGAAAATGGCCGAGACCATTCTCGAGCAGGCCATCAAGGCGGGCAAGCCATCGTCATCGTCATCGTCATCGACTCCACCGCCCCAAGAGAATGCCCTGGAGGTGGTGACCACCCCTCCTCCGACTGCTGCCACCATGCAGGAACCCAGCAATCCCAGCAGCCTGAAGACCATGATTGCCCAGGCCGAGTCCGTGGGCAAGTCCCTCAAAGAGGTGGCCAGTTCACCCTTTAAGGACGAGTCGCAGGACCTGGTGCCGGTGGCCAAGTTGGTGGACAACGCTACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGGCCGAGCGATGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCTTCCGGCAGTGCCAGCGAGAGCAACAACAGCGGCACCGAGGACGTGACCAGCAGCAGCTCCTCCAGTGAGCCCAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAATCGCGTGTCCTGTCCCTATTGTCAGCGCATGTTCCCCTGGAGCAGCTCCCTCCGCCGGCACATCCTCACCCACACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCCCTGCTCTTCACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCACGGCAACGTGGAGTCGGCCATGTCCGTATATGTGCCCACCGAGGACGTCAGCGAGCCCATCCCAGTGCCCAAGTCCCTCATCCAAAAACTGGCCGCCCAGATGAATGCAGCTGCTGTTGCTGCTGCTGCAGCCGGAAATGGCAATGGCAATGGCAATGGAGCAGGTAGTGATGCCTTGGCTGGCGGAGACCTGCCCTACAAGTGTCATCTGTGCGAGGGCTCGTTTGCGGAGCGCTTGCAGTGCCTGGAGCACATCAAGCAGGCCCATGCCCACGAGTTCGCTTTGCTTTTGGCCAAGGGAGCCATTGAGAACGAGTCCAGTCCCAATCAGTCCCAACCACCCACAGCCCATTCCGATGATGAGGGTGCACCGAGGGGCAAGTATCCGGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACCGAGGATCTGCGGCGACACATGCGCACCCATTCCGGCGAGCGACCCTTCCAGTGCGACATCTGCCTGCGGAAGTTCACCCTGAAGCACAGCATGCTGAGGCACATGAAGAAGCACAGCGGGAGGGCCCACAATGGGGATACTCCGGGCTCGGACTGTTCCGATGACGAGCAGGTGATGAGCAGTCCACCAGGCACACCAGCTCCAGCCTCAGCTCAGCCCCAGCCCCCCTCCTCCAATAACAACAACAGCTGCCAGAACAACAACAATAATAACAGCAGCTCCAAGCTGGGACTGAAGCTGCCCAAGCTGCACGAGCTGCTGGACAAGGCCAGCGAGTGGCGGGCCAGTCGGCTGGGCGAGCACAAGGAGAACATGGGCGAGGCCACACCATCAGTGGGAGCTGTGGCCGCTGGATCGGATCTGATTGGCAACCTGCTGGGCATCAGCGACCAGGGCATACTCAACAAGCTGCTGTCCTCCGCCGATGAGGCGGCAAAGCTCTTGGGTGTGGACAACAAATAA
Protein Sequence: MLAAQQQQQQQHNKNTADTEMERQRRDSTTSESSLEHLDLGRTPKKLGAASGNGQSTSTPHELAVTSRKRKLRQLQQQHQQLQHLSDEDEEDEEEDEKEKEKEEQVGARNLGRHKQRRSAAQASIVVDYSSGDASSLRKKFRLNRSAARNLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHTTINNNVISMESQDDLEEEDEEADDADVAMLTSTPDVATLLAGASASGAASRSPSPSPSASPTLLLSCPACGASEFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGAGGSLPPLLGASSSPLHGDEDEEEEDADREDREELEQKREDFFHQLYLKGKAGANSGANISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLGAVGPTGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDASGCGEDSKSRLGEDLGDMSFRSISPTPPPPLLPPSSLPAEGSSQLKHMLMGEPVVALSQQHQPPLKIQVKSLDQLVDKKPAPVQPQEKSSSASSSALDFSMDVLDLSKKPTTPSVTRVPTPSAAAVPPLAGVAGVTPDLSAALEQQQLLLAQQQLFGAGGDAASQYMQQLFRSLMFQSQTPGFSFFPFMAPPPPQTNPEKPPLVSPPSRMNPMPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAVMSQVPGGGSGGGSAHHGHGHGHSHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPGLATPTGHHLVNGGAQGNGQTMTMDDDEPKLVIDEDENEPDHEAEPEDVDDFEEDEDEEEDEPEEEPELIQEEPQHEGEQEEDEEEELPKPLEQLSTQLSVTPNEAAQKMAETILEQAIKAGKPSSSSSSSTPPPQENALEVVTTPPPTAATMQEPSNPSSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSLIQKLAAQMNAAAVAAAAAGNGNGNGNGAGSDALAGGDLPYKCHLCEGSFAERLQCLEHIKQAHAHEFALLLAKGAIENESSPNQSQPPTAHSDDEGAPRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQVMSSPPGTPAPASAQPQPPSSNNNNSCQNNNNNNSSSKLGLKLPKLHELLDKASEWRASRLGEHKENMGEATPSVGAVAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -