Basic Information

Insect: Drosophila oshimai
Gene Symbol: -
Assembly: GCA_018150695.1
Location: JAECWM010000094.1:894815-905780[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.13 9.7 6.8 1.8 1 23 672 694 672 694 0.96

2 7 1.4e-05 0.0011 19.3 1.1 1 23 700 722 700 722 0.98

3 7 9.5e-06 0.0007 19.9 0.2 1 23 728 750 728 750 0.98

4 7 2.9e-06 0.00022 21.5 1.4 1 23 756 778 756 778 0.98

5 7 0.0033 0.24 11.9 2.1 1 23 784 806 784 806 0.98

6 7 4.3e-06 0.00032 21.0 2.4 3 23 814 834 812 834 0.94

7 7 5.9e-06 0.00044 20.5 1.8 1 23 840 863 840 863 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.13	9.7	6.8	1.8	1	23	672	694	672	694	0.96
2	7	1.4e-05	0.0011	19.3	1.1	1	23	700	722	700	722	0.98
3	7	9.5e-06	0.0007	19.9	0.2	1	23	728	750	728	750	0.98
4	7	2.9e-06	0.00022	21.5	1.4	1	23	756	778	756	778	0.98
5	7	0.0033	0.24	11.9	2.1	1	23	784	806	784	806	0.98
6	7	4.3e-06	0.00032	21.0	2.4	3	23	814	834	812	834	0.94
7	7	5.9e-06	0.00044	20.5	1.8	1	23	840	863	840	863	0.98

Sequence Information

Coding Sequence: ATGTTGCCGCTGCAGGAGTCGCAGGTTCTCAACTGGCAGCTGGAGGATTACGCGTTCTTCCGCAAGTGCGGGGAAATCACCGCCTCGCCGGACGTCCAGAGTTTCGGGTTCAACTGCGCCTTCTGCCCGGCCATCTGCCTGCAGTTCTCCGTGTTCATGGACCACATCCGCGTGCAGCACACCCAGGACATGAGAAGACGCTACGAGTCCGGGGAGGAGAGGGAGCAGGGGCAGGAGAAGGGCCAGCAGCAGACGCAGACGGACCTGGTTATCATGGAGCTGGACTGCCCGGAGCTATACCCTCTAGAAGGCAACAAAAAACCCAGCTGGGACGCGGACATGGACATCCAGCTAATGAGCCTCGTTCCGCCGACTCCCGCACTGCACATCACAGCCGACTCACCCGAAATAGACCTGGTCTATGTGGTGGAAAATCCATTGCCACCCTCGCCGCCCCCCTCGGCGGACATTTCCAGCGACGACCTGCAGGCCTCCTCCTCCTCCTCCTCCTGCTTTCAATTGGATCCCTTCGCCGTGCTGCATGAGGTGGTGACGGTGACTCCACCTCAAATCGACTCTAGTCCACCCACCGAGGAGGGTATTGCTCCACCCATTCTGATTCCTATTCAAACTCCACTGCCGCGCTACGAGACTCGACGCGTGGCAATGCAGCGCAAGCTTCGTCAGGCGGAAAACGAGAATGCAAAAGATGTGGAGGATTTAGTGGAGGTGGAGGCGGAGGAGGTGGAGATGCTGGTGGTGGAGGAGCAGGAGGAGGAGGAGGAGGAGGAGCAGAATGAGCAGCCGGAGAAGAACGTGCTGGAAATGACGCCCCCAGCCACACCCCCCACCCCTGTGCCGCCCACCTCGCCCACGAGCAGCACTGCGAGCTGCGTGGATTTCCAGTCGAAAACTCGTCGTGAGCTAGAGCGAAATAGGGAGTTCGTGAGCTCATTACTGACGGAATACGAGCGAGCGGAGAAGTTGTGGAATCCCCGGCACCCCGAATACAAGTACAACGCCAAGAGGAGTGTCTACGGGGAACTGGCTGCTCCGCTGGAGGGCATCTGCCACATGCGACTCTCTGGTGCCGAAATATTTGCCGTGCTCAAGGAGCTGAAGTGCAGGTATCGTCGCGAACTGAGCAAACTAAATGCCCTCAACGGGAAGTACAAGTCCCGACTGTGGTACTTTGACAGGATGCACTTCCTCAGGGGCGTCATTGAAAACAAGCGAGCCGAGAGGGATGCAAAGCTCTCCAATGAGGGAACCGAGAGCGAGAAGTCCTGCGAAACGGACGCCGAGTCCTGCAGCAGGTCAGCCCTGTATCGGGAGGTGCTCAGCTTTATTTTGGACGCCTTCAAGCGGCAGGAATGCCTCTGGAATCCACAGCACTACGACTACGCGAGCTGCAAGAAGGAGCTGTACCGAGAGATCTCCGTTCAGTTGCAGGATGAGCTCAACTACGAGCTGAGCGGCGAGGAGTGCTTCAAGGAGATCCAAAAGCTTAAAACACGCTACCGCAAGGAGCTGCGCATGGTGATCAAGCACAAAGGCCTGTACCTGCCCAAGTTGTGGTGCTACGATGAGATGGAGTTCCTGCAGCCCATACTGCAGGAGCAGATCTTCAATAAGATCAGCAAGAAAGTCGGAGTGGTGGAGACCAAGCAGAAGACCAAGTTTATTGATGCCAGCTCCATACAGTTTGACACCACCGAGGATCAACTGCAGTTCGTGGAGATCTACCGCAACTACTCGGCTTTGTGGGATGTGGATCATCCCGACTTTCGTTCGAACGCGTATCGTGGTCAGGCCTTGGAACAAATGCTGGACGAGATGAACACAACCTTTCACACAACACACTCCCCGGAGCAGCTGGAGAAGACCTTGTTTGATCTGCGTAAGGATTTCTCAGCGCAGAAACGAAAGATACTCACCGATTCTGGGGATTCCAGCAGTATTCCCCTGCTGCACGCCAAGCTGTCTGAGTTTCTGGAGCAGAACATCGGGCCCTTCCGATGCGATGTGTGCTCGGAGCTCGTCAAGACCTGCGATCAGTACAAAGTGCACCGATCTGGACATGATGGGACTCAACCGTTTATATGTACGTTGTGTGGAAAGGGCTTCCAGATGCCCTGCAACCTGACGGTCCATATAAGACGACATCGGAGGGACTTTCCATATGCCTGCGAACAGTGCGACAAGCGCTTTGCCACATCCACGGAGGTGGCCATCCACCTGCGCACCCACACCGGCGAGCGGCCCTACATCTGCGATCTGTGCGGCAAGTCCTTCAAGACGTGGTCCTTCTTTGACATCCACCGGCGACGACACCTCAACCAGTCGACATTCCACTGCCCGATCTGTGCGAAAGGCTTCTACGAGAAGAACAGGTTTACGGACCACATGAACTCCCACTGGGCGATCCGCAAGCACCTGTGCACGGTGTGCGGCAAGACCTTCACCACCTACGGCAACCTGAAGAAGCACACGGAGCTGCATCTGTCGGTGAAGAAGTACAAGTGCACCACGTGCGGCAAACGGTTTGCACAATTCGCCAGCCTGCGATGGCACAAAAAGCGGGAGCACAGCTCCGAGGGGCAAACGGACGAGAAGTAG
Protein Sequence: MLPLQESQVLNWQLEDYAFFRKCGEITASPDVQSFGFNCAFCPAICLQFSVFMDHIRVQHTQDMRRRYESGEEREQGQEKGQQQTQTDLVIMELDCPELYPLEGNKKPSWDADMDIQLMSLVPPTPALHITADSPEIDLVYVVENPLPPSPPPSADISSDDLQASSSSSSCFQLDPFAVLHEVVTVTPPQIDSSPPTEEGIAPPILIPIQTPLPRYETRRVAMQRKLRQAENENAKDVEDLVEVEAEEVEMLVVEEQEEEEEEEQNEQPEKNVLEMTPPATPPTPVPPTSPTSSTASCVDFQSKTRRELERNREFVSSLLTEYERAEKLWNPRHPEYKYNAKRSVYGELAAPLEGICHMRLSGAEIFAVLKELKCRYRRELSKLNALNGKYKSRLWYFDRMHFLRGVIENKRAERDAKLSNEGTESEKSCETDAESCSRSALYREVLSFILDAFKRQECLWNPQHYDYASCKKELYREISVQLQDELNYELSGEECFKEIQKLKTRYRKELRMVIKHKGLYLPKLWCYDEMEFLQPILQEQIFNKISKKVGVVETKQKTKFIDASSIQFDTTEDQLQFVEIYRNYSALWDVDHPDFRSNAYRGQALEQMLDEMNTTFHTTHSPEQLEKTLFDLRKDFSAQKRKILTDSGDSSSIPLLHAKLSEFLEQNIGPFRCDVCSELVKTCDQYKVHRSGHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHCPICAKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLSVKKYKCTTCGKRFAQFASLRWHKKREHSSEGQTDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507806;
90% Identity: -
80% Identity: -