Basic Information

Insect: Drosophila oshimai
Gene Symbol: -
Assembly: GCA_018150695.1
Location: JAECWM010000213.1:536252-538251[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.9e-06 0.00029 21.1 1.1 1 23 302 325 302 325 0.96

2 8 3.6e-05 0.0026 18.1 3.7 2 23 336 357 335 357 0.97

3 8 4.3e-06 0.00032 21.0 0.7 2 23 367 389 367 389 0.91

4 8 0.0042 0.31 11.5 1.4 1 23 395 417 395 417 0.96

5 8 3.3e-05 0.0024 18.2 1.2 1 23 423 445 423 445 0.97

6 8 0.00032 0.024 15.1 1.7 1 23 450 472 450 472 0.98

7 8 4.3e-06 0.00032 20.9 0.4 1 23 478 500 478 500 0.97

8 8 0.0035 0.26 11.8 5.1 1 23 506 529 506 529 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.9e-06	0.00029	21.1	1.1	1	23	302	325	302	325	0.96
2	8	3.6e-05	0.0026	18.1	3.7	2	23	336	357	335	357	0.97
3	8	4.3e-06	0.00032	21.0	0.7	2	23	367	389	367	389	0.91
4	8	0.0042	0.31	11.5	1.4	1	23	395	417	395	417	0.96
5	8	3.3e-05	0.0024	18.2	1.2	1	23	423	445	423	445	0.97
6	8	0.00032	0.024	15.1	1.7	1	23	450	472	450	472	0.98
7	8	4.3e-06	0.00032	20.9	0.4	1	23	478	500	478	500	0.97
8	8	0.0035	0.26	11.8	5.1	1	23	506	529	506	529	0.96

Sequence Information

Coding Sequence: ATGTCAAGTCTAGCTGCAACTGAACCCGCCAATGTAGATCAACCAGTTTGGCATCGGTGGTGTCGCCTGTGTGCCAAGGACCATCCACAAAACCGGAATGTGTACTCCAGGGAGGAGGACCAGCACTCCTGGACGAGCATGTTGGCCATGACCATTGGGAAATACTTCTGGGTGGATATCAAAAAGGAGGATGAACTGAGCAATTGTCTGTGCACAGAATGCTTTACCTTGATGGAGTGCCTCATAGAATTCTCGGAAAGAGTTCGGAGGGTTCAAACACTTTTCAATAGATTGCAGAATTTAAAGCCGGATGTTTTGGTGGACTACGATGAACTACGAACGGATTGCGGCTTGGTGACCGATGAATGGAAGCACGTGATGTCCAGAGCAGTGGAGCAGCATCCTCAAGAGAAACAAGAAGAATTTGTTAATGAGAAGGAAGAAATTGTTGAATTAGAAGAGCCCAGTTTAATAATGTCCAGTTCAGAGAAACAACAACCTCACCAGACACAAGAAGAGTTTGTTGATGAGCAACAAATCGGTGAAGAAGAGCTCGAAATCGATGGAATGGAGGAGCAAATATTAGAGGAGGGTGAGCACCTTGCAGAGGAAGAGGTGGAAACTGTCGAGGAGGAGGTGGACCACCAGGAAACCACAGTTTGCGAAGAAGAAGACGAAGACTACATCGATGAGTCGCAAATATTGGAAGAAAGTCAAGCCGAAGTCTTTCACGTAGAAACATACGATGTTACTTCACAAGAACCTCAATTAGAAGTTGTAAAATTAGATGCTAAAACAAAAGTCATCGAAGAAATCATGGACTCTGAGGACGATCCCCAGGAAGTTCCTTCCCCAGGGAATCTCGTAGAAGAGGAGTGTGAAATCCCTGAAGAGCCAGCCATCTACAAATGCAGCATTTGCAACAAGCCGTACAAGAAGCCCAAGGCCTACCGGCGACACATGCAGGACGTCCACAACATTGTGCCAATAGATCTGCCCCAGATGGAATGCAACCAGTGCGGACTCTGTTTTAGCACGGTCACCCAGCTGCACGCCCACTACCGCACCCATATGCCCGCCAAAGTAAAGCCGGATAACTCTTGTCCGCACTGCGAGAAGCGTTTCACCACCCCGGGAACACTTAAGCGACACGTGGAAGGAGTTCACAGGCAGATTAAGCCGTATGTCTGCGACTGCTGTGGCAAGAGCTTCAACTACATCACGGGTCTCAAGGATCACAAGCTCGTCCACACTGATGATTGCCCCTTTGAGTGTCCCGTGTGTAAGCGACGCTTCAAGAACAAGGCCAGATTAAAGATCCATTCAGACACGCACAGTGCCAACATCTACGAGTGTACAATATGCGGCTTGAAGCTCAAGACCCGTCGCACCTTCAACAAGCACAAATTGGTTCATTCTGACGAGCGACAGTATAAATGTGATGTTTGCGGATCGGCTTTCAAGCGAAGCAAGACTCTTAAGGCGCATCTTATCCTGCACACTGGCATTCGACCATATAAGTGCAACTTTTGCGGAAAAGACTTCTCCAACGGCTCCAACTGCAGATCGCACAAGCGCCAGTCGCATCCCAAGGAACTGGCCGAGGAGGAATCACGCGGAGTGTCCCGTTCTACACTTCTTCCCATGCTGGATGAACTAACCAAGGCGTCTAAGCTTATTAAAACACCAGCAAAGACTTACAAACCGAAAAGCAGTTCGCCAAAAGTTTTGCCTGAAAAGCCAGCAAAAGCCAATGAATCTCCCGCGAAGGACACCGATAGGGGCATCCTCTACGAACTTGTCGAGGAGCTAGAGTACCCCTGA
Protein Sequence: MSSLAATEPANVDQPVWHRWCRLCAKDHPQNRNVYSREEDQHSWTSMLAMTIGKYFWVDIKKEDELSNCLCTECFTLMECLIEFSERVRRVQTLFNRLQNLKPDVLVDYDELRTDCGLVTDEWKHVMSRAVEQHPQEKQEEFVNEKEEIVELEEPSLIMSSSEKQQPHQTQEEFVDEQQIGEEELEIDGMEEQILEEGEHLAEEEVETVEEEVDHQETTVCEEEDEDYIDESQILEESQAEVFHVETYDVTSQEPQLEVVKLDAKTKVIEEIMDSEDDPQEVPSPGNLVEEECEIPEEPAIYKCSICNKPYKKPKAYRRHMQDVHNIVPIDLPQMECNQCGLCFSTVTQLHAHYRTHMPAKVKPDNSCPHCEKRFTTPGTLKRHVEGVHRQIKPYVCDCCGKSFNYITGLKDHKLVHTDDCPFECPVCKRRFKNKARLKIHSDTHSANIYECTICGLKLKTRRTFNKHKLVHSDERQYKCDVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGKDFSNGSNCRSHKRQSHPKELAEEESRGVSRSTLLPMLDELTKASKLIKTPAKTYKPKSSSPKVLPEKPAKANESPAKDTDRGILYELVEELEYP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -