Basic Information

Insect: Drosophila oshimai
Gene Symbol: -
Assembly: GCA_018150695.1
Location: JAECWM010000094.1:293946-297440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.054 4 8.0 1.6 2 23 324 346 323 346 0.96

2 18 0.095 7 7.3 0.2 1 23 353 378 353 378 0.92

3 18 0.032 2.3 8.8 2.2 2 23 389 410 389 410 0.93

4 18 0.23 17 6.1 0.2 3 23 451 472 450 472 0.95

5 18 0.004 0.3 11.6 0.3 3 23 480 500 478 500 0.95

6 18 0.12 9 6.9 0.1 1 23 508 531 508 531 0.96

7 18 0.0007 0.052 14.0 0.2 2 23 536 557 535 557 0.97

8 18 3 2.2e+02 2.6 0.2 1 20 565 584 565 586 0.88

9 18 0.00046 0.034 14.6 0.5 1 22 605 626 605 629 0.91

10 18 0.095 7 7.3 1.4 2 21 635 654 634 655 0.90

11 18 0.0033 0.25 11.9 0.6 1 23 674 699 674 699 0.96

12 18 0.015 1.1 9.8 1.6 2 23 717 739 716 739 0.94

13 18 0.0056 0.42 11.2 0.3 2 23 745 767 744 767 0.92

14 18 0.0093 0.69 10.5 0.1 2 23 771 793 770 793 0.95

15 18 7.3e-05 0.0054 17.1 1.0 1 23 799 821 799 821 0.97

16 18 0.0027 0.2 12.2 0.9 1 23 825 848 825 848 0.94

17 18 7.1e-06 0.00053 20.3 1.7 1 23 854 877 854 877 0.97

18 18 2.2e-05 0.0016 18.8 0.2 3 23 883 909 881 909 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.054	4	8.0	1.6	2	23	324	346	323	346	0.96
2	18	0.095	7	7.3	0.2	1	23	353	378	353	378	0.92
3	18	0.032	2.3	8.8	2.2	2	23	389	410	389	410	0.93
4	18	0.23	17	6.1	0.2	3	23	451	472	450	472	0.95
5	18	0.004	0.3	11.6	0.3	3	23	480	500	478	500	0.95
6	18	0.12	9	6.9	0.1	1	23	508	531	508	531	0.96
7	18	0.0007	0.052	14.0	0.2	2	23	536	557	535	557	0.97
8	18	3	2.2e+02	2.6	0.2	1	20	565	584	565	586	0.88
9	18	0.00046	0.034	14.6	0.5	1	22	605	626	605	629	0.91
10	18	0.095	7	7.3	1.4	2	21	635	654	634	655	0.90
11	18	0.0033	0.25	11.9	0.6	1	23	674	699	674	699	0.96
12	18	0.015	1.1	9.8	1.6	2	23	717	739	716	739	0.94
13	18	0.0056	0.42	11.2	0.3	2	23	745	767	744	767	0.92
14	18	0.0093	0.69	10.5	0.1	2	23	771	793	770	793	0.95
15	18	7.3e-05	0.0054	17.1	1.0	1	23	799	821	799	821	0.97
16	18	0.0027	0.2	12.2	0.9	1	23	825	848	825	848	0.94
17	18	7.1e-06	0.00053	20.3	1.7	1	23	854	877	854	877	0.97
18	18	2.2e-05	0.0016	18.8	0.2	3	23	883	909	881	909	0.84

Sequence Information

Coding Sequence: ATGTCGGAAAACGCGAAAAACAATAGCTGCCTGCATTGCTCCGTTTTCACTTCAAAATACCAGTACCAGGAGATTTTCGATGAGTTCGGTATTGAGCTGGGACTGCAGTCGTTGCTGGCGAAGCACTTCCAGCTGGAGGTCAGCCCCGATCCGCGGAAACAGCAGCTGCTCTGCGAGGTGTGCGTCAACAATCTCATTCGCCTGTTTGACATCGATGAACTGGAGCGGGAACGGGATGCGGCAAAGAAAGGTAACCAGGATCTGGTCCCCGAGGCGGAGGAAACCATTATCGTCACCGAAGTGAAGGCTTCTCCGCCGGCAGTAAAGCCTGAAAGGAAAAGAACTGCGTCTACAAAGACTATATCAAAGGTGCTAAGGCCTGTGCCCATTATTCCAACCCGGGAGCCCAGTGCACGGATAAAGAAAGGAGTTCCTCCGCCACAGTTAGCTCCTGGCAGGGCCAACGATCCGGTGAAACCCACAAAGGAAACCGAACCCGGACCCGTCAAAAATAAAACCAAGCATTCTCCGAAGGAAGCAGATCAGGAGCAGATCAGTGTCCTCATACAAAACATTCTCGACGAAGATGAAGCCATCGCTGAAGAGGTGGCTGAAGAAGTGGCCGCAATCACCGAGGAAGTTGAAACTGAACGGAAAATGATATTGCTAAACGACGAATCAGCAGCACAACCGAATCTAGATGAGGATATTTACATATACGAGCATGAGGATATAATGGATCCAGTTCTGGAGGAAGTGAAGGTCAAACCAATGGTGCGTCCATCCAGGCTGATAGTTCAAACCGAAGAGAGCCAAAGCGAAGGGGAAATCGATGATGGCGAGGCTAGCAATGTGGTTCTATTTAACTTTGTTATGATCAAAGAAAAGGACGACATTGGTGACATTTGGGAGTACTTGTCCACAGTGGTGAAGACCAGCTTCGAGAAGCTAACATTCGAATGGAGTACAGTGTGCAAACTCTGCTCCCTAAAGTGTCCAACATTCGAGACTCTTTTAAAGCACATTTTAAAGGTGCACAAGTCCCGGAAAGACATTTACAAGTGTCCCATTGAAGGCTGCGACAAGGAGTTAAAGGGACGACATTTTCTGGCCATGCATCTGGTTCTTTTGCATGCTCCTGTAGCTGAAATTCCAATTTATGGCAGCTGCCCGGAGTGTAAAATGACATTTTCCAACATTTTGCAGTACAATAAACACTCTTGCGCTCATGTCATTAAAAAGAAAAGAGGAGTTCGCTCATTTTGTGAGATGTGTTCTCTGGAGTTTCCTTCTTGGAAGCGTTTCAACTTTCATAACCAATTTCATCTGGAAAAGCATAGACCTCGCGCTTGCTTTGTCTGCGATTTTGCCAGCAACAACATCGATGAGCTTTTCCAGCATTTGAACTACTCCCATGAGCCAGTGGGCACCTTGTTTTGCGACCTTTGCGACCGCACTTTCCGAGATCCCGCTGTTTTTATGGAGCACAACAAGTCGCATGCCAATGTGAGCAGCACAACCTACTCCTGCGGCGAGTGTATGGCGAACTTTGAATCGCGAGGTCGTTTAAATGGCCATATGAGAGCCATGCATGGCAGCATAATAAGCTGCGAACTCTGCTCCCGTGAGTTTGCTAGCGAAGCAACCTACAACATTCACATGAAGAAGCATCTAATCATCGAGCGTGATGTGCACGTGTGTAGCAATTGTGGCCTGTTAAGCGACAGCCGTGAAAAGATGCGTACTCACGTGGAATCTGAGGATTCAAACTGTTTTGGATCTGAGATATATATGGAACTTCTGAGGGATGCTTACGTCTGCGAGTACTGCACCTCGTACTTCAAGGAAAAGTCCAATCTGCAAGCACACCGGGAGTCGGGAGTCCATAAGGACGGAGTGTACTTGTGCCAGCCGTGCGGCAAAGAGTTTCCCCACATGAAACTGTACCGCCATCACCTGCGGAACTATCAGCAACTGCTCACGGACTCCACGCATCACAAGCTTGAGATTTGTGTCTTCTACATGTGCGATTATGAGAATTGCAATGAGGCTTACGTGAACTGGAACTCGTTGTACACACACAAACGACGCTCCCATGAATCGTCAAACAAGCAGGCGGATAAGCCTTCCAAGTCCGCCCAAGATTGGATTTGCCAGTTCTGCTCGAAGGAGTGCCGCTCAAAGATGTCCTTATCTGTTCATATAGCCAGAAGCCACAATAATGACAACGTGGTTTGTTCCTTGTGCAATGCCTCTTATAAAAGCCAGGATGCTCTAGACAAGCACCATGCCTATTGGCACGAACCCATCGAGTGTCCTGAATGCTTTAAAATCGTCAAAAACCGACGGAACTATGACACTCATGTTAATGTGGTACATTCGAATAAGAAACGCTATGCCTGCAGTGTTTGTGAGAAGGGCTTTTATCACAGGAGTGAAATGGAGGCTCATCAGAAGCTTCATGGCCAATCTTACAGCTGTGAGCAGTGCAGTTTTACCACCAGGAACAAAAAGTCCCTGTCAGTCCATATCCTCGGTCAGCACTACAAACGCTTCGCATTTGAGTGCAAGGTGTGCAACAAGAGGTTTGGACGTCGCCAGGGCTTAAATACTCACATGCAGCGATCTCATGGCTCCAAGTACATGTGCCGTGATTATTTTGAGGGCGGCTGTGGACGCACCTTTGTAAACAGTTCCCAGTTGAATGTACATGTGCGAAAACTGCACAAGGGCAGTATTTTCCTCCAGGAGGACGTTGTGGAAGAGGAGGAGTATGCCAGCGATGAACCATCCACATCCAAGAAGCGCTGCTATCGCATTGCCGAGGACAGCAACATTGAGTATATAGAAGGTGCCGGAGATGATCAGGATGGCATAGAAATGGAGGAAGGAGATGAGGTGGATGAAGAGTTTATCGACGAGGAACCAGATCCTGACACGAAACATTGA
Protein Sequence: MSENAKNNSCLHCSVFTSKYQYQEIFDEFGIELGLQSLLAKHFQLEVSPDPRKQQLLCEVCVNNLIRLFDIDELERERDAAKKGNQDLVPEAEETIIVTEVKASPPAVKPERKRTASTKTISKVLRPVPIIPTREPSARIKKGVPPPQLAPGRANDPVKPTKETEPGPVKNKTKHSPKEADQEQISVLIQNILDEDEAIAEEVAEEVAAITEEVETERKMILLNDESAAQPNLDEDIYIYEHEDIMDPVLEEVKVKPMVRPSRLIVQTEESQSEGEIDDGEASNVVLFNFVMIKEKDDIGDIWEYLSTVVKTSFEKLTFEWSTVCKLCSLKCPTFETLLKHILKVHKSRKDIYKCPIEGCDKELKGRHFLAMHLVLLHAPVAEIPIYGSCPECKMTFSNILQYNKHSCAHVIKKKRGVRSFCEMCSLEFPSWKRFNFHNQFHLEKHRPRACFVCDFASNNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPAVFMEHNKSHANVSSTTYSCGECMANFESRGRLNGHMRAMHGSIISCELCSREFASEATYNIHMKKHLIIERDVHVCSNCGLLSDSREKMRTHVESEDSNCFGSEIYMELLRDAYVCEYCTSYFKEKSNLQAHRESGVHKDGVYLCQPCGKEFPHMKLYRHHLRNYQQLLTDSTHHKLEICVFYMCDYENCNEAYVNWNSLYTHKRRSHESSNKQADKPSKSAQDWICQFCSKECRSKMSLSVHIARSHNNDNVVCSLCNASYKSQDALDKHHAYWHEPIECPECFKIVKNRRNYDTHVNVVHSNKKRYACSVCEKGFYHRSEMEAHQKLHGQSYSCEQCSFTTRNKKSLSVHILGQHYKRFAFECKVCNKRFGRRQGLNTHMQRSHGSKYMCRDYFEGGCGRTFVNSSQLNVHVRKLHKGSIFLQEDVVEEEEYASDEPSTSKKRCYRIAEDSNIEYIEGAGDDQDGIEMEEGDEVDEEFIDEEPDPDTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -