Dosh002081.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000287.1:2449899-2464040[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-09 5.7e-06 25.9 0.0 1 36 262 298 262 305 0.89 2 2 4.8e-19 1.2e-15 56.9 0.0 1 43 522 565 522 567 0.95
Sequence Information
- Coding Sequence
- ATGCCGCTCCACTTTTGCGCCGGAATGAGCAGCTGCAGCTGCAGTGCGTCGCTGGCTCCTGCACCTGCTCCTGCTCCTGCTGCTCCACTTCAGTTCCAAGTTGCCATTCCCAAACGCACGCACCGAACACACGCACTTGTGCGCAATCAGGACGATGGGGCAGCGACAAGGACATGGGGCTTAGAACGCGTTGCTGAAGAATTTATGGGTCGCAGGCAATGGAAACATTATCAAGAGCAACTGACGCGCAGCCACTTGAATATCGAGGAGCAACAGCCCATAGCAATAGCCGGTTCCGAGGACGAGCCACCGCAATACAACCACAGCAGCAAGGAGTGTATCGAGAGCAACCCCAACCACTGTAAACCAGAAAACCACCGTCTAGAGCAGCACCACAACGGCAGCCCGCTGCTGGAAGAAGATTTTGAGAACAACCAAACATCACACGATTCATCACGTACACCAACACCGGGAGCCACCAGTACACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGCCAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCAGGGCGAATTGGTGGCCGAAACAGCAGCAACAGCCACCATTAGTGGCACTAGTAGTAGCCACATTCATCAGCACGACAATACGCCCAGTCCCAGTGCCGATGCACCGCTCGATCTTAGCAGCAAGCCATCGCCAAACTCATCGATTAGCGGCGATGTGAAGTCCGTCAGGGCCTGTGCCACGCCCACGCCGTCTGGAAGGAGGGCGTACAGCGAGGAGGACCTGAACCGGGCGCTGCAGGACGTGGTGGCCAATAAGTTGGGCACCCGCAAGGCGGCCAGCCAGCACCATGTGCCGCGCTCCATTCTGGTCAACCGGCTGTTCAAGATGCAGCACGACCTGGACCAGGAATCGGATCCCCAGGCCGAGGAGCCCAACGAGGACTCCAACGACGACGGCGAGGCGGAGGTGGACAGCAATGCCTCGACTCCGGCGCCCTCATATCCGGCGGACTTTGCCAGGGCGCAGCTCCGCAAGCTGAGCCACCAGTCCGAGCACAATGGCAGCGATCTGGGCGAGGACCTGGATCGGGGATCTCCGAAGATGGGGCGACTGCCGGGCGGTGGCAGTGCCAGTGCTAATCCCGGCGGCCTGCCCTCTATTCCGCTGGATGCCAATGGCGGCTACTCCGCCGGCAACAGCCTGCTGGCTGGATCCTCCTCGAGCATCCAGAAGATGATGGCCAGCAACATCCAGCGGCAGATAAACGAGCAGAGTGGCCAGGAGGGCCCACGGAACGGCAATGCCAGCGATTGCAGCAGCAACAACGGTGGCTCCTCATCGCTGGGCTACAAGAAGCCCAGTATTTCGGTGGCCAAGATCATTGGGGGCACGGACACCTCCCGATTTGGGGCCTCACCCAACCTCCTGGCCCAGCAGCACCACCCGGGCCACCACCTGACCCACCAGCAGCAGCTGAGCGCCCAGGAGGCGGCTGCTCTGGCGGCGGGCAAGGGAACGCGGCCCAAGAGGGGCAAGTATAGGAACTACGACAGAGACAGTTTGGTGGAGGCAGTCAAGGCGGTGCAGCGGGGCGAGATGTCGGTGCATCGAGCAGGGAGTTACTACGGCGTGCCCCACTCCACGTTGGAGTACAAGGTTAAGGAGCGCCACCTGATGAGGCCGCGCAAGCGGGAGCCCAAGCCTCAGCCCGATCTGGTGGGCTTAACCGGACCCGCGAACAAGCTGCAGCTGGACAAGCTGAAGGCGGGACCCCATGGTGGCTCCAAGCTGAGCAACGCCCTCAAGAACAACAGCCAGGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAGCAGCGGCCGCTGCCACGCCCAACGGCCTGAAGCACCCGCTCTTCGAGGGCGCCGCCCAGCAGCTGCCCTTCCAGCCGAACATGTTCTGGGCCCAGCCCAATGCCTCGAACGCCTATGGCCTGGACTTCAATCGCATGGCGGAGGCGATGCGGAATCCCCAGGGGTCCAACCACCATGGACCCATGAAGAGTGCGTTGGAGATGGCGGAGAACATGTACGACGGGATCATTAGGAAGACGCTACAATCCAGCGAGGGCAATGGCAGTGCAGGCAACGGAAACGGCAGTAGCAACGGCAATGGCCACGGACACGCTTTACTGGATCAGCTGCTGGTGAAGAAGACCCCGCTGCCGTTCACCAACCACAGGAGCAACGACTACGCAGCCACCTGTTCCAGTGCCAGCGGGGAGAGTGTGAAGCGGTCGGGCAGTCCCATGGGCAACTATGCGGACATCAAGCGGGAGCGTTTGAGTGCCGACAGCGGCGGCAGCAGCGACGAGGAGCACCACCACACCAGTCACAGCAGCCACATAAACAACAACAACAGCGACCTGGCGCACAACAAGAACAAGAGCCAGGTGAACGGGAACGGGAGGAGCAGCAGGATGACCTCGCGGGACTCGGAAACGGATGCCAGCAGCCTCAAGAGCGGCGAGAGCGGCGGCGGCCACCAAAACCACAAAATAATGGATCTCAACGGGGGCAACAACAACAGCAGCAGCAGTCACATCAAGTCCGAGGCGGAGGCATTGGGAATGGGAGTGGGAATGGGAAGTTCCGGGAACAGCTCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCCGAGCAGGTGGACCAGGCGGAGCAGTTATAG
- Protein Sequence
- MPLHFCAGMSSCSCSASLAPAPAPAPAAPLQFQVAIPKRTHRTHALVRNQDDGAATRTWGLERVAEEFMGRRQWKHYQEQLTRSHLNIEEQQPIAIAGSEDEPPQYNHSSKECIESNPNHCKPENHRLEQHHNGSPLLEEDFENNQTSHDSSRTPTPGATSTPSPPPEPNDWRPSAKCNFCVNGRLLTVNAQGELVAETAATATISGTSSSHIHQHDNTPSPSADAPLDLSSKPSPNSSISGDVKSVRACATPTPSGRRAYSEEDLNRALQDVVANKLGTRKAASQHHVPRSILVNRLFKMQHDLDQESDPQAEEPNEDSNDDGEAEVDSNASTPAPSYPADFARAQLRKLSHQSEHNGSDLGEDLDRGSPKMGRLPGGGSASANPGGLPSIPLDANGGYSAGNSLLAGSSSSIQKMMASNIQRQINEQSGQEGPRNGNASDCSSNNGGSSSLGYKKPSISVAKIIGGTDTSRFGASPNLLAQQHHPGHHLTHQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKLQLDKLKAGPHGGSKLSNALKNNSQAAAAAAAAAAAAAAATPNGLKHPLFEGAAQQLPFQPNMFWAQPNASNAYGLDFNRMAEAMRNPQGSNHHGPMKSALEMAENMYDGIIRKTLQSSEGNGSAGNGNGSSNGNGHGHALLDQLLVKKTPLPFTNHRSNDYAATCSSASGESVKRSGSPMGNYADIKRERLSADSGGSSDEEHHHTSHSSHINNNNSDLAHNKNKSQVNGNGRSSRMTSRDSETDASSLKSGESGGGHQNHKIMDLNGGNNNSSSSHIKSEAEALGMGVGMGSSGNSSILHEKLAQIKAEQVDQAEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00507534;
- 90% Identity
- -
- 80% Identity
- -