Basic Information

Insect: Drosophila ochracea
Gene Symbol: -
Assembly: GCA_035044125.1
Location: JAWNML010000003.1:9954279-9961541[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0048 0.3 11.5 0.8 1 23 1074 1097 1074 1097 0.96

2 8 0.013 0.81 10.2 1.0 1 23 1102 1125 1102 1125 0.96

3 8 0.00017 0.011 16.1 0.8 1 23 1337 1360 1337 1360 0.96

4 8 0.0027 0.17 12.3 0.8 2 23 1369 1390 1368 1390 0.97

5 8 0.037 2.3 8.7 0.3 1 23 1397 1420 1397 1420 0.96

6 8 1.7e-05 0.001 19.3 1.4 1 23 1426 1448 1426 1448 0.97

7 8 8.1e-06 0.00051 20.3 0.4 1 23 1453 1475 1453 1475 0.99

8 8 0.0097 0.61 10.6 3.4 1 23 1481 1503 1481 1503 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0048	0.3	11.5	0.8	1	23	1074	1097	1074	1097	0.96
2	8	0.013	0.81	10.2	1.0	1	23	1102	1125	1102	1125	0.96
3	8	0.00017	0.011	16.1	0.8	1	23	1337	1360	1337	1360	0.96
4	8	0.0027	0.17	12.3	0.8	2	23	1369	1390	1368	1390	0.97
5	8	0.037	2.3	8.7	0.3	1	23	1397	1420	1397	1420	0.96
6	8	1.7e-05	0.001	19.3	1.4	1	23	1426	1448	1426	1448	0.97
7	8	8.1e-06	0.00051	20.3	0.4	1	23	1453	1475	1453	1475	0.99
8	8	0.0097	0.61	10.6	3.4	1	23	1481	1503	1481	1503	0.99

Sequence Information

Coding Sequence: ATGGTTGCGAAATTTCGGCGGCGATGTTTGCGTGTCCAGCAGCGACTACACGACCACGTCCAGGACATGATCGAGCACAAGTCACAGAGGGAGGAGGAGCTCACACAACAGTCACAGAGCAAGCCACATGCAAATGAGACGTCCACGGCAGATTACATGCATCTGCCACAGTCACAAATGGAGCGGAAGCGTCGCCTGGTGCCAAACACGGAATCATCGTCGCTGCCAAAATATACCAAGACTGATGCCACACAGCTGCGGACGCCGCCCAAGCTGCGGCGTATGCAGTTACGAGTGCGCAATATGCACACTGAATCCTTGCCAGCCAGTAAAGTTGAGACTGAAACGGAAGCGGGAGCCACAGAAACGACCAGCGACTGTCGACTGAGTGAGACGAGGCAGCGAACGCCACAGAGGTCGCCATACAGAGGGAGACTTATTCACATGCCATGGAAAACGAAAGCGGCACGCAAACAGATCTCGGAAACGTGGTCCACCTCCCTCTGTCGAACGGACTCTGTGACGCCGGAATTGCCCAAAGAGCAGGAGTCAGCTAATGGAACGGCTGCTTtagcaaaaacagcagccgAAGCGGGTCCAAATTCATCGGAAGATTTGAGTGATCTGTCGGTGAATGTATGTCGAGGCttcgacaacgacaacgacaacggcagcagctCCAATTCTTCCACAATAGTAAGCCCACAGCCAACTACAAATGTGAAGCTCAGGTTCCCACCAAAACACTGCTCGCCCAATAAAACTCGTGTTTTGCGGCGACAGATCAGACGCTGCTATGCGCCGGTCAAGAGGACGAGGCGCGTTTTCAAGAAGCTAAAGGCGGCAACTGAAGCAGCTAAGGTTGACCTGTGCTGCGCAGAGGTGCTAAGCAGTAAAACAAAAGTGGCAGCGGAGGCAGTTGACCAAATGCCAAACAGCTCTGCGAATGAGGAgccgaccagcagcagcagcagcagcaatagcagaaCACTTGAAAGTCCAGAGATAAATATAGTCGATGAGCAGGAGAGTAAAATCATTGAGAAAGCAGAGAATGGAATGCCAGAAACAGAGTCAAATGCACAGCAGGAAGAACTGCAAGTCAGCTCGCCAGTAAGTCAAAGCGAAAATACAGAGGACCAGCTGGAGCCTGATCAGGCAATCAAATGTTCGCTAAACAATTTGGGCAATGATACTCAGGACAAGATGTTGATGGAACAAATGGAAAGCATATCAGAAGAAATGATAATGGCAGAGGGGGAAGTAAATGGAATAGTAGAGATAACGCTTATGAGTCCTGTGCAGCTTGAGGAATTAAGCTCTTCCAGCATGGATCacatggagagagagagacggcaATCAGCAACGCCGGAGGTGCCAGCCGCAGAGTGCGAGGTAGAAGTGAGCCTAACAAATGAGGAACAAACGTCCGATCAAATGACGGATCAAACATTGGATCAAATGTCGGAAGAAACTTCGGAGCTTATAATCAGTATACCGCTAGATGCGCTTGGCGAGGATCTACAGCGTAAACTATGCAACGAGTCGGAGCCGGCGACAAATGAGTTAGTCGACGAGTTGAAGAAACCAGATGGGGAGCTCAACGAGCCCGTGGAAGCGGACGATGTCAATAACAATGAGAATGGCGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTAGCACTCGcaaccaaacaaattgaagctgAACCCAACGGAGGCGGTGacggtgatgatgatgatgatatggaGTCACTGGAGAAACTACCTAATCTGCAGCacgaggaggagcagcagcaacagcatcagcagccgtCACGCGCTTCTGCCAATACCAGTTCCATGGATTTTTTGGCTGAATTCGAGAAGCATTGCGAAAAGTCGCTCAAGCTGCAGGCAGCTGGACAGGAGCTGGCGGAGGCCAAGCAACAGTTGGCGGTGGAAATGAACGATGTGGAGAATACACTGCACGGCATTCTCAATGAGATGCAGGATGAGCATCTCTATACGCCCGTCTGCACACCCATCGATGAGTTCCTCACGCCCGCCGATTATGCGCCGCCAACGCCAGCATCACCCAATCTCTTCGAGCAGCCAGCGGAGGCACAGCAaccactgcagcagcagcagcaacagcagaaggaGGGAAATCTCTTTGATAGCAACACATTTAGTAATGAGCTGATTGGCTTTCAAAATGATATGCCCTGCTTTGAGAATATTGAGTCTACGCCGGAATCGATGGCTGTGCAGCAGAGCCTGCAGCTCGAGCTGACACAGCTCTTCAATGAGCTGCAgccagcacaacaacaacaacaacaacaacagcagcagcaacagcagtcaacacaacaacagcagcagcaacagttgcagctgcagcaggaaACTGTCAGCTATGAGGCACTATATCAAACAGCACCACTTCCTgtcgccaacaacaacaataacaataaattgcagGTCATACAAATGACGCCACAGGAGACGCTGTGGCAGGCACAGgctgcacaacagcaacagcaaccacaacagcagcctCAGGCGACACCAACAACACAATTGCAATGGTCCACTGTGGGCGGCTTGGAGGCGATCAAGACGACGCCCAGTCTGGATAATctggacagcagcaacagcaacaacagcaacagcaacaacaacaacacaaccacctccaccacaaccaccaccTACTACATTAATGCCAGTGATCTCTACcaaacacaacagcagcagcagcaacagcctaGCGAGTCTTATGCTTTACTCGACAGCAATGATAACTATGTgctggaacagcagcagcagcagcaacaacaacaacaacaaccacaacaacagcagcctaTTATGATACTCATACAGCAGCcggagctgcagcagccagtgGCTTCAGCTAGTAATCCGCAGCAGGCGCCGCTCCACATCAACTACAGCAATGAGCTGCAAGcttatcaacagcagcagcagcaacatccacaTCAACCACAACCACATACAAAACCACAAGCACATCCACAAccacatccacaacaacaacaagtacaaaaTACAGTATTAGGCTTACCAGCAGTGGTGCCGCCGCCCACTCGTGGTCGCCCGCCCATGTTAAAGTGCCGCTTCTGTCAGAATGGACCGCGCTTCTCGAGCAGTCTGGAGTACAGTCGCCACTTCATTGGGCTGCATCCCGCCGACGCGCCATTCAACTGTCCGCACTGTCCGCTCGCCTTTGCTGGTCGCAGCAAGCGCACCCAGCACATCCTCAGAAGCCACATTGTGCAGCAGTTTCACTGTGGTCAGTGCTCGCAAATGTTTCCCTCGCAGCGTGCGctcgatttgcatttgcagcgaTTACACATGCCACTCGCCACGGAGCcgacatcggcatcggcatcgagTGGCACAGCATCAGCTGGTGTCCGTCTAGATGAGGTTCAACTGCGGATTGCCACCACCAATGAtctgcgacagcagcagcagcagcagcgacaacatcagcagcaatcaGTTGCACATATGCGTGCCTTGGAATTACAGACAAGCCCATCCAGACCACGCAGGACGCGCATACTGTGCTGCCCGGACTGCGAGGACTGCACTTCGGCCAGTGGCCACATTCAAGGCAGCGTGCAGCCATACGAGGAGCTGAACACTTTGCAACCACCGCCCACGGTGCTGACGCCGCCGTCGACAATTGCATCGTTGCCGTCACCGCAGCCGGCGCCGCATATAACGCTGCCGTCACCGGAGCAATCGGAGCCAGACTCGACGACGGCGACGTTGCGGCAGTTCCGCAAACGTTGCACAGTCAACAGCTCGACAACAGCGggggcagcagtagcagcccctacagcagcagcagcaatagcaacaacaacaacatcaatgcTAACAACCACTGCCGCCTCGCCATCGCcgtcgtcatcgccatcgtcgtcgACCATGGAGACAACAAGCGCCACACTGCAACTGGGCAAACTGCGTGGCACCCATCAGTGCGTCATCTGCGAGAAGCGTTTCACCAACGTTATTGCGCTGCGGAAGCATCAGCAACTGGCCCACGATTCGCAGACGACGATGCCGTGGGTCTGTTCAATCTGCAAGCGTGGATATCGGAAGCGCACCGATATGGATAACCATATGAAATCGCACGAGCCGAAGGGTCGACCCTATGAGTGCAACGAGTGTTGGGTGCGATTTCCGGAGTTCAAGCAGCTGGTGATACACAAGTTCACCGTACACGAACTAATCAAGCCGCACACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGTGCGAGGCTTCGAGTGCGAAGAATGCGATGAGGCATTCGCCTACATCAAAGATTTGCGCAAACATCGTCGAACCCACAACAGCGAACTATTTTACAAATGCGATTACTGTCCGCGCACGTTTCTACATTTTACGCCCTATCGCGTACATATGAACACCCACCTGCCGCTGGGTGTGTTCCTTAACGACAAGATGCCCAGTAGCGTATGCAGCAAAACGGAGAATCCATCAAACACTGAAGAATCGCTGCTACCATTGACGCCGCTGAGCAACTGCAATGgaaacagtggcagcaacagcggaTTAGAGGACTGTCACGGCTCTGTGGAGATGGTGGTGGAGAGCAGCATGGCGGCGCCATCTTTGGACATGATTGTCGATACGCCATAA
Protein Sequence: MVAKFRRRCLRVQQRLHDHVQDMIEHKSQREEELTQQSQSKPHANETSTADYMHLPQSQMERKRRLVPNTESSSLPKYTKTDATQLRTPPKLRRMQLRVRNMHTESLPASKVETETEAGATETTSDCRLSETRQRTPQRSPYRGRLIHMPWKTKAARKQISETWSTSLCRTDSVTPELPKEQESANGTAALAKTAAEAGPNSSEDLSDLSVNVCRGFDNDNDNGSSSNSSTIVSPQPTTNVKLRFPPKHCSPNKTRVLRRQIRRCYAPVKRTRRVFKKLKAATEAAKVDLCCAEVLSSKTKVAAEAVDQMPNSSANEEPTSSSSSSNSRTLESPEINIVDEQESKIIEKAENGMPETESNAQQEELQVSSPVSQSENTEDQLEPDQAIKCSLNNLGNDTQDKMLMEQMESISEEMIMAEGEVNGIVEITLMSPVQLEELSSSSMDHMERERRQSATPEVPAAECEVEVSLTNEEQTSDQMTDQTLDQMSEETSELIISIPLDALGEDLQRKLCNESEPATNELVDELKKPDGELNEPVEADDVNNNENGENFCQSATADSFNAAVALATKQIEAEPNGGGDGDDDDDMESLEKLPNLQHEEEQQQQHQQPSRASANTSSMDFLAEFEKHCEKSLKLQAAGQELAEAKQQLAVEMNDVENTLHGILNEMQDEHLYTPVCTPIDEFLTPADYAPPTPASPNLFEQPAEAQQPLQQQQQQQKEGNLFDSNTFSNELIGFQNDMPCFENIESTPESMAVQQSLQLELTQLFNELQPAQQQQQQQQQQQQQSTQQQQQQQLQLQQETVSYEALYQTAPLPVANNNNNNKLQVIQMTPQETLWQAQAAQQQQQPQQQPQATPTTQLQWSTVGGLEAIKTTPSLDNLDSSNSNNSNSNNNNTTTSTTTTTYYINASDLYQTQQQQQQQPSESYALLDSNDNYVLEQQQQQQQQQQQPQQQQPIMILIQQPELQQPVASASNPQQAPLHINYSNELQAYQQQQQQHPHQPQPHTKPQAHPQPHPQQQQVQNTVLGLPAVVPPPTRGRPPMLKCRFCQNGPRFSSSLEYSRHFIGLHPADAPFNCPHCPLAFAGRSKRTQHILRSHIVQQFHCGQCSQMFPSQRALDLHLQRLHMPLATEPTSASASSGTASAGVRLDEVQLRIATTNDLRQQQQQQRQHQQQSVAHMRALELQTSPSRPRRTRILCCPDCEDCTSASGHIQGSVQPYEELNTLQPPPTVLTPPSTIASLPSPQPAPHITLPSPEQSEPDSTTATLRQFRKRCTVNSSTTAGAAVAAPTAAAAIATTTTSMLTTTAASPSPSSSPSSSTMETTSATLQLGKLRGTHQCVICEKRFTNVIALRKHQQLAHDSQTTMPWVCSICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLVIHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFECEECDEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFTPYRVHMNTHLPLGVFLNDKMPSSVCSKTENPSNTEESLLPLTPLSNCNGNSGSNSGLEDCHGSVEMVVESSMAAPSLDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00576613;
90% Identity: iTF_00518707;
80% Identity: -