Doch006835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila ochracea
Gene Symbol
JARID2
Assembly
GCA_035044125.1
Location
JAWNML010000047.1:6263238-6271803[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.9e-22 1.3e-18 67.0 0.0 6 89 2031 2112 2026 2112 0.92

Sequence Information

Coding Sequence
atggtTGTCTCGAAAGACAACAAGCGTCGCCGTAAGGAAACAGATACGCCGCCAACGTCATCGTCCGCGGcgtcggcggcggcagcagcagcagcactggcTGCGGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAGGCACAGCGTAAATTCGCCCAAGGCCAGAGTGCGCCCAATTCGGCTAGCGGTGGTGCATTCAACGCTGCCAGcgttgcagcagccgcagcggcagcagcaacagcggcggcagcagcagcagcaacagcatcggGCTCCTCATCGTCTGCTGGTCCAAGCACATCGACAGCAGACAgcctgcaacagcaacagccaccgATTGAGATATTGCCGAATCAGCGCCCGAAACCGCAGGATTTTCTAACGTTTCTCTGCTTTCGCAGTTTTCAGGGCAAACCCAAGGCCAATGATGCAGGTGCTCTTCCGCCCAGCAGCGATgctgtcaacaacaacaacaccaccaacaacaacaagaagaataacagcagcagcagcaaaaagaaacgCGGCCGCCCGGCCAAAAAACCAGGCACGCAGCAGATGCCAACAACGACTAAAACAGCAAGTGATAAAATtgaagcagcagcgacgcccaCGCCTCCTCCGCCTGTCCAATCTCAGCCTCAgtctctgctgctggctggaGCAGTACGTAAGCGTGCCGAGGTTGTTGCCGAGGGCAATCGACGAGGCGGACGACGTCAGGAGATTTTAAAGCGTCGCTCGAATCGCGCCggcaacaaagaaaaagatgATGAAccggagcagcagcaccaacaggcgcagcagaagcagcagcagaataaTGCAGACGCAGACCATGtcgaggaggaggtggaggatgACGAGGAGGATGAATTCTTTTCGGCGCATGATGCCAGCTCGCGTAATGGTGGcgccgctgccgttgccgatGAGACGCTCTCCAAGTCGGAGACAATGCAATCAAATACAAGACGTGGTCGTGGCAGAAAATCTGTTGTGGCAGTAACAGCTGACTCACCTGTTGCAACCAACGAGAGCAGGGCCAGCAAGGAAAAGGAGAAGGGGCCCGTGAAACGTTTGCGTCCACAGCGTGAATCACCCATTTTCATACCCTCCCCGGAATCATCGGGACGCATGACGCGACAACGTGCTTTTTTTGAGCCTGTCAAGGTGCCGCCAAAGCAAGAGCCGTCAGAAGTGGAGGAGAAGCACGAGGTTGAGCAGGAGCAAGAGctgaaagaacaaaaaaagggCAAGGAAaaggagcagctgcagaagcagtcaacggcagcagcaacagtcgagcccaagcagctgcagcagcacatcAAGGAGAAAATCAACTCGAGCATTTATGCCAAAGATGTGGTCAAGATAGAGAATGGTGTCACCACAGCGacagctgctgcggcagcggaGCAACAAAAGGGTCTCAACGTCTTCGATTTCAGCTCCGATGATGAGCAGCCGCTGGCCAAGGCCATCAAGCTGAAAAAGGGCGGCAAAAAGGCGGCAGTGATTGCGAGCGGAGGACCAggagcaactgctgcagcagctggcacAGCAAATGCACGTGGTCGCAAATCAGCCGGCGGCGGATCGGCTAAAAAGCAACAGCGGCTGGAGGAAaaggcagcagtagcagcaactcCGCCTGAAGAGCCGCTGAAGACAAAGCGTGGTAAGCcattaaaaaagaaagcagCCGAGCCGGAAAACGACGAGCAGGGGGTGGATGCCGAGGAGTCCGATTTAAGTCCACCCTCGcccaaaaagccaacaaacaataataattcacGTCCCGTGCGTCGTCAGGCGGCGCAGCTGAAAGTGCAGCAGCGCTCACGGAGTCCAagtccgcagcagcagcagcgcagtcaGCGTCCGTCGCGTAAGACGAAGGAAGCGGCTGCCATCTACATGGGCATCATTGGGCACAAGTTGCAGCTGGCGGATGACGAGGACGATGATCTGTCGCTGAGCAGCTTCCCAGACATACCCAATGTCAAGCAAATGGAGAAAATGGAGAAGGAGATTAAAAAGAATGCGGCGGGCAAACAGGCAAGCAAaccaacagtagcagcagcatcaatagcaacaacaaaaacagcagaagtagcaggagcagaagcagtaggatcagctgctgctgctgcagttgagcCAACAACTgaaatgccagcagcagcagatgcgcCGACGGCACCTCCTCCTGCACCGCGACGCGGTCGACCGCCCAAGCAAGCAAAAGGTGCAACAACCGCAGCGGGGGCAataagtgcagcagcagctgcaggcacAGTCAAACCTCAGATTGAGGGCATGCTGGTGAAGAAAGGCGCACTGGCGCTGGCCAAAGCAAAGtccgaacagcaacaaaaaaaccaacaagaacagcaacaacagcagcagcagcagcaacaaaaagtcgACTCCGATGCCGAGGAGGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGCAAGCTCGAGAAGAGTTTCAGTGACTCGGATGATGAGCCGCTGGCAATTAAggtgccaacagcaacagcagcggcagcagcagccgcaacagttgcaacagcaacaacagcagcagcaataacaacaacaacaacatccgcagctgcaacaacaaacacagcaaccaaagccagcaacagcagcagcaaaacggaaacagcagcaacatctgtAACTcaaacaacgacagcaacaaccgcagcagcaacaactacagtaactgcaacagcagcaacaactacagctgcagcagcagcaacaacaactgtagcagcagcagcaacaacaattgcagcagcagcatcagcagcagctacttTAAAGCCACCACAACTGGGCGTCGCAACAGCCACGCCAATAACGCCGTTAACCATGCTGCCGCTGACAACAAAGCCCAGTCCATTTTCCATATCGCCACCGAGCTATGCATCCGCAGCAGCCACACTAAAAGCAATGGAAAAGAAATCACCCGTGCCCACCTCGAAGATATTAAATGTGCCTGCCACGTATGCGTTGCCCGGCAGCGGACCAATTGGCATGGGTGTGGGTGCCGTTGGTTTTGGCAAGAGCACATCGTATTTGCCGCAGGCATCGCCACACTATCAATCCCCGTATGTGCGTCCGCCGAcgttttgtgctgctgcaggtGCGGCTGCTGCCATTGGCAATAAGACGCCGCatccgcaacagcagcagcaacagttgctggtagcgacagcagcggcggcggggGCGGGGGCAACAAGCACAGCCCAGCAGACATCGACACCACTCAAATATCAAACGGCGCCCACAATCTATCCGCCACCCATTGAGGCGTATCAGTGTCCCAAAATCAATCCCAATTTTCTAACGCCCAAATATGATCGGGCGAGCATTTTGCCGCgtgtcaataataataataatgcggTGACCATTAGCAATACGAGCGGCAGCAATTTTACGGCGCCAACAATCGCAAGGCCAACCCTGAGCACactggccacgcccaccacacacgctgctgttgcagcggcggcagctgcaactgttgcaacaaaGGCAACGACTGCCGTTAGTCAAAGTCTTAGTTTGACCATAACTGCAACGCCGCCAGCTGTGGCAtccacatcagcagcagcggccgcacaacagcaacaacaatcacaacagcagcagcaacaacagcagcagtcacaacaacaacaatcacaacagcagcagcagcaacaacagcagcagcagcaacagccacatccacaacaacaatcgccAGCGTTGACAATGACACCAACGAcgagcaccaacaacaattcggATCCGTTGAAAGATGAGATTGGCAGCATTTTGGCACAGGCAACACTCATGCCCAGCAAGGAGGAGTCGGGCAAGATCTTTGGTATTGCCAGCGTGAGTCTGGCACAAAGTTCCGGGCCGGATAATACCAAATGTACGCTCGGCAAATGTGGATCGATACACAAACCGGTGTTGGGACCCGTTGTGCCCACAGAGGCCTACTTTGGCGATCAGTTGTCGGGCAAGGAGCGTCGCAAGGCCAAGGTGAATATGACACACGAACAGATCCAAAAGTGGCTCATAGAGTGCAGCTCGAATCCCGATGAGATCCAGGATGATCTCGATGATGAGTACGACGACAGTTTGAGGCCGCAACAGTCACAAACGCCGCCGGGTCCGACGCGTGACGATAAGGAGAGCACCAGCTTCAGCAGCTCCTCGAAGAATACACGCGGCGAGCTCGGCAAAAGTGAGAGTGCCTGGTCCGCCAAGGGGCCATCCCTGAAAGCGACACCGGTCCTCGTCAGCGCAGTgtcagcggcaacagcagcagctgcagcagcagcagccaatcTGCGGGATACTGTGGACACTGAATCGGATACCATGGACTTGGATAAGTGTGTGACGCCCGTGAATCTCACCCAGAAAAAGGAAGTGTcggctgccgcagcagcagcagcaggagcagcagtcgccaacagcagcagtgatAAAAGGAAGCCGAAGAATGCGGTTaaagcaacagttgctgctgctgctgctgggggaGCAACTGGCAGTAACAATAAGCGAGGtggtggagcagcagctgctgccaacaaACGCCTTGCGGCTGCCACAAAACTGTCGACGCCAACGCCTaccaatagcagcagcaatacgCCCACctcagcaacggcaacgacaacaacactgacaacaacaacaatgtcagCCAAACGAACGCCCATCTATCAGAGCAGCCCTGGCAAAGCCaagctcgacaacaacaacaagaagcagcagcagcagcaaaagttgccAGCTAAAACTTCAGTTTATGCCTTTGGCAAGGAAGaggagacaacaacaacaacagcagcagcagcaactgtaaagaaaacagtagcaacagcaactgttgctactgctgctgctgctggcaacaagGCGACAAATCGTCGCCGCAATCTTGAAGtggaagcaacagcaacaaaaactgcaacGCCGCCGCCAGCGTTAAGCGAACGTTCGCCGACTAAAAAGCGTGCGGCTgccacagcggcagcaacagccgtGCAACTGACGCTCAGCCCAACGGATAAGCTGGAGAAGCccaaggcagcagcagcagcagcgcgcaagaaacagcagcaaaagcaacagcagcaaaaggagcaacaacagcaaaaggagcagcaacagcaaaaggagcagcagaaggagcaacaacagcagcagcagcagaaaaagacagcaacaaccgcagcaggagcaacaacagccagtgCTGGTGGAGATTCGGATGCAGAGGGTGCCACCTTTTACATACCACTATTGCAAGGCGCCAGCAGTGGCGATGGTGGCATTCAAGGTGTTGCCGTCAAGCTGGGACGCGAGGGACCCGATGGACCCAATCAAAAGGTGGTGATGCAAGCGACGCTTGTGACCAAGGCGCAAATGGACACGAACTCAGCGAAGCCGCTGCCCGACAATGAGCAGCTGGTCAAAACGCTCCTCAATGCGGCCAACACAAACACCAATGAGCCAACAACGcccagcaacaatagcaacagcttAAAAGCCAGCacctcagcagcagctgcagttgcagttacagcagcagccgcagccgcagcaacgggagcagcaacaacagctgcttcTGGTAATCTAGTCCGCGTCAATTCCAATTCATCACTCTTCTCTGGCTCAGCCAAATCTCGTacagctgccactgctgcagcagctgctgcgatGGCCGCCACGAATGCGCTGGCCAAAAAGTACAAAGATGATACGCCCATTAAGATGGCCAATAATACGGCATTCCCCAGGCACGATGATCCCACACAAATGGTCGAGGCGCCCATTTTTAAGCCCACCGAAAAGGAGTTCGCTGATCCCATTGAGTTCATTGAGCGCATCACACCAATCGCCGCCAGATTTGGCATCTGTAAGATAATACCGCCTGCCAGCTTCAAGCCGGAGTGTCGGATTTCGGATGAGATGCGATTCACGGCGTACAATCAGTATGTGCACAAGATGCTGCATCGCTGGGGACCCAGTGCCAAGGAGTTAAGTGCCATCAAAAAGTATTTGGCTACACAGAGCATTGTGATGAATCATGCGCCCTGGATTGGTGGCATGGAGGTGGACTTGCCGCGTCTCTATCACACCGTGCAGGAGCTCGGCGGCCTCAAGGAGGTCATCGAGAAGAAGAAATGGGCACGTGTCGCCGAAGAGATGTGCATACCAAAGCTCGCCCAGGATCGGGTCACCAAACTGGATGACATTTACTGCAAGTACTTGTTGCCCTACGATACCCTCTCCCCGGCGGAACGCCAAAAACTCTTCGACGAGGTCGAAGCGGATTGGGCCAAGCGAGAGGCACGCGCCCGTCGCAACGCGGATCGTTTTGTCAATTCAACGGAGAGCGTTTCCAATGTCGAGGATGATCTGTCCaccgatgaggatgatgaaTCTGAGGAGGAACTCGACGGTGTCTCCATGGAGTGCATTGTCAAGGGTCGCAGCATGCCACTCAGTCAATTCTATCGGATTGCGCGCAACACAATGGCGCTGTGGTTCAAGAGCACCGATCCTACCGTTAACGAGGTGGAGGCGGAATTCTGGCGACATGTCGCCGTCCGCGATAGTCATGTCTGTGTGCATTCCGGCTCCATTGATAGCTCCGGCTGGGGATATGGTTTCCCGAGTCCAGGTCCCAAAGGCAAGGGTTCGAATTATGCGCGTCACCCGTGGAACCTGAAGGTGCTCACAAATAATGCGGGCTCGGTGCTGCGCTCGCTGGGCCCTGTTATGGGCGTCACAGTGCCCACACTGCATGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTATCGGGATCCTCACGGTCTGTCCTGGATCGAGTATTTGCATACGGGCGCCTCCAAGCTCTGGTATGGCATACCCGACGATCAGAGTGCCAATTTCCGGTCGGCCCTCACGTCTCTGATTCCGACGCACTGTCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTCACCGATCGCGGTGTCTCACTGTGCCGCATCGAGCAGAAACCGGGCGAGTTTATTGTTGTCTTTCCGCGCGCCTACACCTCCAGTCTGGCCACCGGCTATGTGGTCTCCGAGAGCGTTTACTTTGCCACCAACTCATGGCTGGATCTGGCCAAGGATGACTTTAGAGACATCCATGAGAGCTGTGAGCCGGCCATGTTCtcgctggagcagctgctctTTGCTTTGGGCTACGATCAGCGCGTCAATTCGGACACATTGCATCAGATGCTGCCCATGTTAAACGATGTGTGCGAGAAGGAATCGGCGGCACGTGAACAGCTTAGAGCCGCGGGCGTCACAGCCAGCGAAAAAGTGCAGGCGGAGAAGGGACAAAAGGGGAcgaagaagcaacagcagccgccgcacAAATCCATCGATAGCGAATGCGATCTGTGCCGTGCCAATCTGTACATATCGATGGTGCGCACCGAGGATGGCAACATCTACTGTTTGCAGCATGCCCTGAAGAATATCAACAGTGGTAATGTGCAACCGAAAATTTGCAAACTGGTCTACGCCTACAATGTGGACGATGTGCAGCAACTGATCCGCCAGTTGCAGGAGAAGATTAATCAGATGCATCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence
MVVSKDNKRRRKETDTPPTSSSAASAAAAAAALAAESSPEMPKRTKVQAQRKFAQGQSAPNSASGGAFNAASVAAAAAAAATAAAAAAATASGSSSSAGPSTSTADSLQQQQPPIEILPNQRPKPQDFLTFLCFRSFQGKPKANDAGALPPSSDAVNNNNTTNNNKKNNSSSSKKKRGRPAKKPGTQQMPTTTKTASDKIEAAATPTPPPPVQSQPQSLLLAGAVRKRAEVVAEGNRRGGRRQEILKRRSNRAGNKEKDDEPEQQHQQAQQKQQQNNADADHVEEEVEDDEEDEFFSAHDASSRNGGAAAVADETLSKSETMQSNTRRGRGRKSVVAVTADSPVATNESRASKEKEKGPVKRLRPQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQEPSEVEEKHEVEQEQELKEQKKGKEKEQLQKQSTAAATVEPKQLQQHIKEKINSSIYAKDVVKIENGVTTATAAAAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGGKKAAVIASGGPGATAAAAGTANARGRKSAGGGSAKKQQRLEEKAAVAATPPEEPLKTKRGKPLKKKAAEPENDEQGVDAEESDLSPPSPKKPTNNNNSRPVRRQAAQLKVQQRSRSPSPQQQQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEDDDLSLSSFPDIPNVKQMEKMEKEIKKNAAGKQASKPTVAAASIATTKTAEVAGAEAVGSAAAAAVEPTTEMPAAADAPTAPPPAPRRGRPPKQAKGATTAAGAISAAAAAGTVKPQIEGMLVKKGALALAKAKSEQQQKNQQEQQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTATAAAAAAATVATATTAAAITTTTTSAAATTNTATKASNSSSKTETAATSVTQTTTATTAAATTTVTATAATTTAAAAATTTVAAAATTIAAAASAAATLKPPQLGVATATPITPLTMLPLTTKPSPFSISPPSYASAAATLKAMEKKSPVPTSKILNVPATYALPGSGPIGMGVGAVGFGKSTSYLPQASPHYQSPYVRPPTFCAAAGAAAAIGNKTPHPQQQQQQLLVATAAAAGAGATSTAQQTSTPLKYQTAPTIYPPPIEAYQCPKINPNFLTPKYDRASILPRVNNNNNAVTISNTSGSNFTAPTIARPTLSTLATPTTHAAVAAAAAATVATKATTAVSQSLSLTITATPPAVASTSAAAAAQQQQQSQQQQQQQQQSQQQQSQQQQQQQQQQQQQPHPQQQSPALTMTPTTSTNNNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYFGDQLSGKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEYDDSLRPQQSQTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSAVSAATAAAAAAAANLRDTVDTESDTMDLDKCVTPVNLTQKKEVSAAAAAAAGAAVANSSSDKRKPKNAVKATVAAAAAGGATGSNNKRGGGAAAAANKRLAAATKLSTPTPTNSSSNTPTSATATTTTLTTTTMSAKRTPIYQSSPGKAKLDNNNKKQQQQQKLPAKTSVYAFGKEEETTTTTAAAATVKKTVATATVATAAAAGNKATNRRRNLEVEATATKTATPPPALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQKQQQQKEQQQQKEQQQQKEQQKEQQQQQQQKKTATTAAGATTASAGGDSDAEGATFYIPLLQGASSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSAKPLPDNEQLVKTLLNAANTNTNEPTTPSNNSNSLKASTSAAAAVAVTAAAAAAATGAATTAASGNLVRVNSNSSLFSGSAKSRTAATAAAAAAMAATNALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDLSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKGTKKQQQPPHKSIDSECDLCRANLYISMVRTEDGNIYCLQHALKNINSGNVQPKICKLVYAYNVDDVQQLIRQLQEKINQMHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-