Basic Information

Insect: Drosophila obscura
Gene Symbol: KLF12
Assembly: GCA_018151105.1
Location: NW:2417959-2451483[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.2e-06 0.00026 21.0 4.5 1 23 309 333 309 333 0.98

2 3 0.00011 0.0067 16.5 0.2 1 23 339 363 339 363 0.97

3 3 7.7e-07 4.7e-05 23.3 4.8 1 23 369 391 369 391 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.2e-06	0.00026	21.0	4.5	1	23	309	333	309	333	0.98
2	3	0.00011	0.0067	16.5	0.2	1	23	339	363	339	363	0.97
3	3	7.7e-07	4.7e-05	23.3	4.8	1	23	369	391	369	391	0.99

Sequence Information

Coding Sequence: atggttttcatGAATGGACTTGGATCCGACCCTCTGTCAGCAAAGGAGGCAGAGGGCCCTCCGGTTCAGGTTGAACCAGTTGATTTGAGCCTACGTTCGCCGCGCGCGAGCACTTCGcatgggagcagcagcagtggaagcggcagcggcagtggcagtggcagctgtAAATCCTCATCGACCACCAAAGCAGTCCATAGCAGCATCAACTACAGCAATGGCAAGCAGTCTGGATCATCCTCATCCGCATCCAGCTATGCGGCCGGTGCTTCGGCCGGTGCCTCGTCGTTGGGGGCCTTTGGccgtcagcatcagcatcagcagcccaCTCAGCAACAACTTTATGCCTCCGGTGTGTCCAAGTTGCCATTCTCGCCATTCTTTGCCGCGTCGCCATTCTTCTTCACCTACCGCCGGATTAGCGGCGgtggggccggggccggggccggggccggcGCCGGCGCCGGAAGCGGCAAGCAGgaggacaacaacaacagctgcagctacaacaatggcagcagtggcggcagcagcagcaactcctCCTCGCTCATGCAGGACTACGACCGCAAATTCAGCCTGCTGAGCCTGTTCAAGAATCCCTACAAGTTCAGTGACGGGCAGGCAGCGAGAAAGACCTCACCGACGggcggcagcaccagcagcagcaagtcgGCGGTGGCCCCTGCCTGCTCCTCCGCCTCATCCTCCGCCAGCTGGAAGAGCTACGCGGGCTCTGGGTCACCGCACGCTGCCCTTAATCCGGCCTTCGGTGGCATGGCCCTGGGCGCCACCCGCAAGGACAACAGCAGCTTCAGCGGCATCAATTTTGGCGGCGGAGCCTCCTCCTTTGCTCGGTCCACCTCCTCCGATGCGACGGCCAACGGCGGCGGCTACAATGATCTCTCCAAGAACCGCAAGGTACACAAATGCGACACCGAAGGCTGCGACAAGGTCTACACCAAAAGCTCGCACCTCAAGGCGCACAAGCGAACGCATACGGGTGAGAAGCCGTATGTGTGCACCTGGGAGGGCTGCATCTGGCGCTTTGCCCGCTCCGATGAGCTGACCCGCCACTACCGCAAGCACACGGGCGTGAAGCCATTCCGCTGTCAGCTCTGCACGAGAAGCTTCAGCCGCTCCGATCATCTGTCGCTGCACATGCGCCGCCACTGA
Protein Sequence: MVFMNGLGSDPLSAKEAEGPPVQVEPVDLSLRSPRASTSHGSSSSGSGSGSGSGSCKSSSTTKAVHSSINYSNGKQSGSSSSASSYAAGASAGASSLGAFGRQHQHQQPTQQQLYASGVSKLPFSPFFAASPFFFTYRRISGGGAGAGAGAGAGAGSGKQEDNNNSCSYNNGSSGGSSSNSSSLMQDYDRKFSLLSLFKNPYKFSDGQAARKTSPTGGSTSSSKSAVAPACSSASSSASWKSYAGSGSPHAALNPAFGGMALGATRKDNSSFSGINFGGGASSFARSTSSDATANGGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00603647;
90% Identity: iTF_00518019;
80% Identity: -