Basic Information

Insect: Drosophila obscura
Gene Symbol: Ouib
Assembly: GCA_018151105.1
Location: NW:5138317-5139951[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00025 0.016 15.4 1.5 1 23 182 204 182 204 0.97

2 5 0.007 0.43 10.8 0.0 1 23 210 232 210 232 0.97

3 5 0.00054 0.033 14.3 1.2 1 23 238 260 238 260 0.98

4 5 2.9e-06 0.00018 21.5 0.7 1 23 266 288 266 288 0.98

5 5 4.1e-06 0.00025 21.0 4.3 1 23 294 318 294 318 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00025	0.016	15.4	1.5	1	23	182	204	182	204	0.97
2	5	0.007	0.43	10.8	0.0	1	23	210	232	210	232	0.97
3	5	0.00054	0.033	14.3	1.2	1	23	238	260	238	260	0.98
4	5	2.9e-06	0.00018	21.5	0.7	1	23	266	288	266	288	0.98
5	5	4.1e-06	0.00025	21.0	4.3	1	23	294	318	294	318	0.93

Sequence Information

Coding Sequence: ATGCTGCAAAATGTTTGTCGCGTATGCGCCAGCAACACGGACGACAGAAATGCATTGAAGCTCTTTATGAGCAGCACGCGGGGGCTGGTGaaacaaatcaatttaattgccGGCATATTGCTTCAATTTGAGCCCGATTTACCAGATTGGATATGCGAACGGTGTCAAACAGCCCTACAGAGTGCCATAGAGTTTCGGGAGCAGTGTCTGAGCAGCCAAGAGAAGTTAAATGGAATGCTCAGTAAGTGTTCCCGGCCTGTACGCCGTAGTAAGCGCTCCCAGAAACACCTGGAGGTAGACACAGCGCTCAAGAGTCCACCAAGTCCCATAGAAGTCATGATCAAAATCGAAAATCTAAGCAATGGCGATGAGGAGGACGATGGTGTAGATCATCTAGACACCAGCAACGATGCCGATCCTGATTTCGTAATTAAACAGTTGCCCTTGTCGGAAGATGATGCACCTGGATCACCAGATAAAGTCCGAAAAGGTCGACGAAAGAAGTACTCGAGCGAAAAGCGCCAAAAACCAGCCCTAACCGTCTTCTTCTGCGATCAATGTGGCACAAATGTAACAGGAAAAACATCCTTTGAGCGCCACCTGCGGAAGCACAGCGGCGACCGGCCCTTCCCGTGCGAACTCTGCCCCGCCCGCTTTCTATCCGCTGGGGAGCTGAAAAGCCATCAGGTGATGCATACGGGGGTTCGAAACTTCCCCTGCCGCTACTGCGAACGCAGCTATGTCAATTACAGCGGACGGCTGCGTCACGAACGCACTCATACCAATGAGAGGCCTTTTGTATGCTCCCAGTGTCCCAAGAGCTTCACCAATTCGTACATTCTAAAGAACCATATGCTGATCCATACGGGCGAGCGCTTGTTTAGATGTGAGCTGTGCCAGCGTTCCTTTTCGCGTCCAACCCACTTGAAGACCCACTATCGATCGAATACGCACAAGCACAATCTGGAAAAGGCAAGGGTCGAAGAAGAACAGCAGCCAGAGGGCTTGGAGATGCCTCTGCCACAGCAGACTGGATTCctggtggagcagcagccgtcgATGGCCTTCACGATAGAAGTGCCATTGCCTGTGGAGCAGGATGTAGCCACTCGACAGCTCTTGGGCCCAACAACCTTAGTATTTAGTGCGAGTTAA
Protein Sequence: MLQNVCRVCASNTDDRNALKLFMSSTRGLVKQINLIAGILLQFEPDLPDWICERCQTALQSAIEFREQCLSSQEKLNGMLSKCSRPVRRSKRSQKHLEVDTALKSPPSPIEVMIKIENLSNGDEEDDGVDHLDTSNDADPDFVIKQLPLSEDDAPGSPDKVRKGRRKKYSSEKRQKPALTVFFCDQCGTNVTGKTSFERHLRKHSGDRPFPCELCPARFLSAGELKSHQVMHTGVRNFPCRYCERSYVNYSGRLRHERTHTNERPFVCSQCPKSFTNSYILKNHMLIHTGERLFRCELCQRSFSRPTHLKTHYRSNTHKHNLEKARVEEEQQPEGLEMPLPQQTGFLVEQQPSMAFTIEVPLPVEQDVATRQLLGPTTLVFSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00611613;
90% Identity: iTF_00611613;
80% Identity: -