Dobs005134.1
Basic Information
- Insect
- Drosophila obscura
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018151105.1
- Location
- NW:3004359-3008164[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 7.7e+03 -3.8 0.1 85 103 66 82 39 109 0.47 2 2 2.4e-93 3.4e-89 298.1 9.7 2 218 306 508 305 508 0.91
Sequence Information
- Coding Sequence
- ATGTTTAAGAAGATCTTCAcgtacatacaaaaaaatgccAGCAGCTCCAACATGTTCAGCCCAACAACgacacccacagccacagcagcagcagaagcaacagtggcagtggcaccaTTGAATGCCCATGAGGATGGCGCTGCCACGCGGCGACGCATCGAGTATGAGGAGGAGGCACAGGACAGTGGgctcttgctggaggaggacgaggaggaggaggagttcATTATGGAGGATGACATTGAGCGTCAAATCAAGACATCCATAATCGATGCCACTAAAGTGCATGCTGCCAAGGCCAAGGCCATGGCTatgacgctgccgctgccgacCAATCTTCAAATGGATGATGAGCTGGCAGACTTTGCCAACGAACCGGTGACGCCCAACGATGGCGAACTCGACGAACAGTTCCTGGAACTGGATAATTTTCCCAACAATGAAATTATCGTCCTGGGCGGCACAGATCTGCTCAACACTTCCCTGGCCGCGGACAACATTTCCGAGGACCCCCTGGCCATAGACAATATTCTGGACTCGTCTTCGGTGACCACCAACGAGGAGGTGGACACCAGCGGTGATTTGCTTTGGCTGAAGCTCAACACGGAATCGGAGCCGCTTAATGGGAGCTCAggtggtggcagcagcagcagcgtcgtgGTGCCCCAggcgaaacagcagcagcaggcggccaaGACCAAAGAAGATGAGATGCGTGACGGTGGCTCCGACTCGGGTTTGGGCAGCGAAACGACCAGAATTACGCTCAAGCAGCAGTCATCAGCTGTGCCCGAGCCAAAGCGTTCGAATCTGAAGCGCCGGCTGGAGGATAACGAGAGCGATGCCATCGATCTGGTGCCCGATATGTCCGGCGCTGCACTCTCGACAACCAGCACCGTGGCCGCACAGAAGCGACCGAAGCGCAGCATCAACTTTGACAATGTCAAAATCTACTATTTCCCCCGGCAGCAGGGATTCAGCTGTGTGCCCACCCTCGGCGGCTGTACGCTTGGTATGGGTGCGCGCCACATTGCCTTCAAGACGATGACCCTGGCGGAGCATGCAGCGGAGCTGAGGCGTGCGCATCGCAGCCAGAATCAGGATGTGCAGCCGCGTGGCTCGAGCAGCGACGATACCGAGGAATCGGAGGAGGATTTCCTCAGCGAGGGCAGCGGCTCGGATGCGGACGATGGCTCCAATGGTTTCCTCACGACAATGTCGCCCAAGCAGCGTCGTGCGCTGCTCAAGGCGGCGGGCGTGCGCAAGATCGATGCCAGCGAGAAGATCGAATGCCGCGACATCCGGAACTCGCGCGAAGTGTGCGGCTGTTCGTGCCGCGAGTTCTGCGACCCGGAGACCTGCGCCTGCAGCCAGGCGGGCATCAAATGCCAGGTGGATCGCTCCATGTTCCCCTGCGGTTGCTCGCGTGAGGCCTGCGGCAACACCGTCGGCCGCGTCGAGTTCAATCCAACGCGTGTGCGCACCCACTACATTCATACGGTGATGCGGCTGGATCTGGAGCAGCGGCAGGGCGCCCAGGGCCACATACAGCAACAGCCTCCGCAGAGCAGCTCCCTGACGTACTCTTCCGTGGGCGCAGGTGTGCCCAGTGGCGCTGTGGCTTCCCCCACGGCCGCCGCCTCTCACTGTTACTTCATGCAAACGCAATCGAACTATAGCTCGGGCTATGCTTCGCCCGCGTACACGCCCGAGAGCAGTGTCAGCtactaccagcagcagcagcagcaatctgtggtggtggtgtctCCTCCCATACCGACCACTGTccagcagcagacacagaGCAGCTATGCGACGGCCTATGCCCAGTTGGATGGCCTGGATTCGGGTCTGTTCGCCACGGGAAGCAATGCCACACCTTCCTACGGGGAACTCTATCAATCGCTGAGCTACGGCAGTGCCCAGctcacTTCCTACCAGTCCGCCTATCAGCCGCTCTCCGCATCGCCCGTTGCCGTGGCACCCAGTGGCGGTTTTAGCTCCTGTTCGGTGCCATCGGCGCCGCCCTTCGGTAATGCCACAACGACAGCGTCGAGCAATGCCCAATATCAAACCACCGCCGCCTCCATGACTGCTGCCTCATCgatcagtggcagcagcagcagcattagcaGTTGCAATCGTCTCAGTGGTACCACCACCgcctccaccgccgccgctgccgctgccgcctccGCCACGACCAATGATTTCATTAGCCTAAACTCACCGCTAGCCAGTTCCTCGCGCCTCTCCCAGATCAATGATCTGCTGCAGCACAATCGTAATACCACCGCCGCCTTGGTGGCCGTCTCCGAGGGTTACAGTGGCGGCGTCAGAACCAGCTCTTCATCATCTACGATCGACTCCATTGATACGCCGCCCATTGTTGAGGATGCGCAGCGCAGCTGCATGACCTTTGAGGCGTTGCCGCCGCCACTTGTCAATCCCACGCCCATTGTGGCAGTGGTGGAGAGCAAAATGCCAACGATAGCGGGCGTGCAACCAACGCCGCCCTTAGCGCCACAGCCACGCCAGCCGCTCGATGTGCAATCCCTGACAGAAAACGCATAA
- Protein Sequence
- MFKKIFTYIQKNASSSNMFSPTTTPTATAAAEATVAVAPLNAHEDGAATRRRIEYEEEAQDSGLLLEEDEEEEEFIMEDDIERQIKTSIIDATKVHAAKAKAMAMTLPLPTNLQMDDELADFANEPVTPNDGELDEQFLELDNFPNNEIIVLGGTDLLNTSLAADNISEDPLAIDNILDSSSVTTNEEVDTSGDLLWLKLNTESEPLNGSSGGGSSSSVVVPQAKQQQQAAKTKEDEMRDGGSDSGLGSETTRITLKQQSSAVPEPKRSNLKRRLEDNESDAIDLVPDMSGAALSTTSTVAAQKRPKRSINFDNVKIYYFPRQQGFSCVPTLGGCTLGMGARHIAFKTMTLAEHAAELRRAHRSQNQDVQPRGSSSDDTEESEEDFLSEGSGSDADDGSNGFLTTMSPKQRRALLKAAGVRKIDASEKIECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRSMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGAQGHIQQQPPQSSSLTYSSVGAGVPSGAVASPTAAASHCYFMQTQSNYSSGYASPAYTPESSVSYYQQQQQQSVVVVSPPIPTTVQQQTQSSYATAYAQLDGLDSGLFATGSNATPSYGELYQSLSYGSAQLTSYQSAYQPLSASPVAVAPSGGFSSCSVPSAPPFGNATTTASSNAQYQTTAASMTAASSISGSSSSISSCNRLSGTTTASTAAAAAAASATTNDFISLNSPLASSSRLSQINDLLQHNRNTTAALVAVSEGYSGGVRTSSSSSTIDSIDTPPIVEDAQRSCMTFEALPPPLVNPTPIVAVVESKMPTIAGVQPTPPLAPQPRQPLDVQSLTENA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00514873;
- 90% Identity
- iTF_00603332;
- 80% Identity
- -