Dobs012065.1
Basic Information
- Insect
- Drosophila obscura
- Gene Symbol
- ct
- Assembly
- GCA_018151105.1
- Location
- NW:334289-412135[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6e-27 4.7e-23 80.7 0.0 3 72 968 1038 966 1043 0.95 2 3 6.7e-32 4.8e-28 96.7 0.0 3 77 1457 1532 1455 1534 0.96 3 3 4e-31 2.9e-27 94.2 0.0 3 76 1752 1826 1750 1829 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACATTGCCACAAGCCGCTGGGACAGCCGATATGGATCTGACGGCTGTTCAATCAATCAACGATTGGTTTTTCAAAAAGGagcaaatttatttattggcaCAATTTTGGCAACAGCGCGCTACCCTTGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTGTCCACCAGCAATACGGATCCCGCCAGCGGCAGCAtccacagcgacagcgacaaccacaaccacaacacaggagcagcagcaggcggaggagcagcagcagcagaaggggaAGCAGGAGTGCAGGAGATCGACGATTCGGATCTGGAACTGGCCAGCGGTGGCGGaggatctggatctggacaTCAACTGAATAGCTCCATTGTTGCAGCGGCCATCACGCTGCAGCAGAACGGCGGCAATCTGCTGGCCAACACCAATACGCCGTCGCCCTCGCCGCCGTTGCTCAGcgccgagcagcagcaacagttgcagAGCAGTCTGCAGCAGAACGGTGGTGGTGTCGGCGGCGCCTGCCTCAATCCGAAGCTCTTCTTTAATCACGCCCAGCAAATGATGATGGAAGCGGCggcagctgccgcagcagcagcggcggcggcggctgtccaacagcagcagcagcatcagcattcGCCCCTGCATtcgccagcagcagaggcagcagccgcagcggcgGCTGTGGGACCCACAGATCATCAAACAGTGGCCGAGGCCACTGcaaccaccacccacacagccaccaccaccagcagcagcagcaacaccaccaatagcagcggcagcagaagccGTGGCAGCCTCCACCACAACGAGGACGAGGAGCAGGACGACGAAGACGATGAGGACGATGAGGAGGAGAACGCCTCCATGCAGTCGAATGCAGCGCATTtggacgatgatgacgatgacatgGAGCTGGAGCCCCATCAGTCCCTGGAGGCCATCGAGTCTGCGGCAAGAACTGAaccacaccaacaacaacagcagcagcagcagcgtcagagGCATGTGGCTGGCGATGCAGGAGATCTGGAGGAGGCGTCTGCTGTAGCGGCTGTTGCGTCTGCCACCGATCCAGATTCAGATCCAGTTGCAGATGATATGGAAGCTAGTTTAAATGTTAGCAATAATCACAATACCGATAGCAATAATAGTTGTAGTCGaaagaacagcagcaacaacagcgtcGGCACTGGTGTGGCACTGCGTGATAGCAATGATGATATGGATGATCCACATGTGGCCACATCGGTTCATAGTGCCGAGGATGATGACTGTACCAATAACAATACCaataccagcaacaacaacaacaacaaaaacaatgggggaagcagcaacaacaacaacaacgagaagCGCAAGAagcgcaacaacaaaacaaacagcaacagcaacaatcagCCCGCTGTACAAATAGCTGCCAAAGACAAAGAGATTAAAGCACTTCTCGACGAGCTGCAGCGCCTGCGTGCCCTGGAACAGACGCATCTGGTGCAGATCCAGCGCTTAGAGGAGCATCTGGAGGTGAAGCGGCAGCATATCATGCGCCTGGAGGCACGCCTCGACAAGCAGCAGATCAATGAGGCTTTGGCCGAGGCTACCGCCTTGGCTGCCGCTGTCAATGCGGCTGCCaccaataacaacaacaacaacagccagagcagcgacaacaacaaggTGAATGCCGCCTCTCCATCATtggaggcagcagcatcagcatcatccaACGATCTGGATGCCACCCAGGCCTCAGTCCAGGCTGAggacgatgaggaggaggaagaggaggatgaCCACCATCAGGCCATGCTCGTGGACAATGACGAGGGAGAGGAGGCTGCCTCTACCacccaccagcaccagcaggtCGATGAGGAGgacgatgatgaggaggaTGAAGATGCCGAGGATCAGGATCATCATCGAGCTAAAATCAAAAAGGAACAGCACAGTCCTTTGGATCTGAATGTTCTGAGTCCCCAGTCGGCCATTGCGGCCgcggccgctgccgcagctgccgccgcctgTGCCAACGATCCCAACAAATTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAGGCCATCAAGAATGgtgctgccaATGCCGGATCCCAtccgcaccaccaccaccagcagcagcagcaacagtcgcatcaccagcatcagcaccaccagcagcagcagcagcaccaccacctccagcaACAGTCGCAACAACACAGCAGCgtcaccaacagcagcagcaacagcagcagctgcaattcGGGTCCAGGCAGCACCACCGACGGCGCCCTCAACCACCATCACTCGCTGGGGCATGGCCACCACCTGGTGGGCCACAATCCGCACGGCCTGCCCCACGGCCATCCGCACGGCCAGCTGCTGCATCCGGCAGCAGCCCACCACCTGCACCACGCCGACTCCAACTCCTCCAGCGCCAATAGCACACCCAGCAGCACCGCCCAACTGGCGGCCAGCCTGGCCAGCACCCTCAACGGCAGCAAGTCCCTGCTGcaggcagccgctgccgccaaTGCCGCTGCGGTGGCAGCCGGTGCCGTGGCCgaggacaacaacaacggctTGACGCCCAATGCTAatgcagcggcggcagcagcggccatGGCCGCCCACGCCCAGCATGCGGCGGCCTTAGGACCGGGCTTCCTGCCCAGTCTGCCGGCCTTCCAGTTTGCTGCCGCGGCGGCCGCCAATCAGGATGGGCGCGGACACTATAGGTTCGCGGACGCGGAGATGAATCTGCCGCCCGGCGCCTCGATGGCCGGCCGACTGGGAGAGTCGCTGATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAACCAGGCCCTGGACACGCTGCACATCTCGCGGCGCGTACGGGAGCTGCTCTCCGTGCACAATATCGGACAGCGGCTGTTCGCCAAATACATCCTCGGCCTGTCGCAGGGTACCGTCTCTGAGCTGCTGAGCAAACCAAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGACGATAACGCCGTCATGCTGCTCAAGTCGCTGATACCCAAGAAAGATTCGGGACTGCCTCAGTATGCGGGACGCGgcgctggcggcggcggcggtggcgatGACTCCATGTCAGAGGACCGCATTGCCCACATCCTGAGCGAGGCCTCCTCGCTGATGAAGAGCACagccgcccagcagcagcgggaccAGCAGGACCAGCAGCGGCGACACGCTGGCGAGGATACGCACAGCAACGAGGACAGCAAGTCGCCGCCACAGAGCTGCACATCGCCGTTCTTCAAGGTGGAAcagcagctgaagcagcatcagcaccgggagcagcagcagcagcacatggcCTCCGAGCAGCGGGACGCTGTGGTGGCcgccgcccagcagcagcaccaacagcaccagcagcagcgggagcagcGCGAACGGGAGcgcgaacagcagcagcgactccGCCACGAAGATCTCGCCCAGGACAAGATGGCGCGACTCTACCAGGAGCTGATAGCCCGCACACCACGCGAGGCAGCCTTCCCCAGCTTCCTGTTGTCGCCGTTCTTTGGAGGAGCCGCCGGCATGCCCGGTGCGGCCAATGCATTCCCAGTTCCCGACGAGAACATGCGCCACGCCTTCGAGCGGGAGATCgccaagctgcagcagcagcaccagcagcagcaggcggcccaggcccaggcccaagccCAGGCGGTGTCCGGCTTCCCCAACTTCTCCAGCCTGATggccctgcagcagcaggtgctcaATGGCGCCCAGGACCTCTCGCTGGCCGCCGTCAAGGACATCAAGCTGAACGGACAGCGCGGCTCGCtggagcacagcagcagcagctccaaggACGGTGACCGCGACGATCCACGCGACTATCCACAGTCGCTGCACGGCCGCAAGTCCGACACCCCGGCCCCGCCCGCACCGCCAGCCCCGCCCTCGGGCAGTGCCGGCAGCGTGCCCGGCTCGGCCAACAGCCTCGCCAGCGCCAGAGACGGCGTTGGGGCCGGAGCAGGATCCGGTGGAGCCGGCAGCCATGCCAGCAACTCGGCCGCCCCCAGTCCGTTGAGCAACTCGATCCTGCCGCCGGCACTGAGCAACCAAGGGGAGGAGTTTGCGGCCACCGCCAGCCCACTGCAGCGGATGGCGTCCATCACCAATTCGCTGATCACCCAGCCGCCGGTGACGCCGCACCACAGCACACCGCAGCGGCCCACCAAGGCGGTGCTGCCGCCCATCACCCAGCAGCAGTTCGATATGTTCAACAACCTGAACACGGAGGACATTGTGCGCCGCGTGAAGGAGGCTCTCTCCCAGTATAGCATCTCGCAGCGCCTCTTCGGTGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGACCTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGACAATGCCGTGCACAAGCTGGTCGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACCGGCAGCTACTCCGGCAGCCCCCAGATGCCACAGGGGCTGGCCAGCAAGATGCAGGCCGCCGCCCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCCCAGGCGCAGCACATCATGCAGCAGATGCAGGCCGTGGCCATGTCCGCggccatgcagcagcagcagcagcaggcggccgccgcggccgctgccgttgccgcccagcagcagagccagcaccagcatccCCACCAGCACCCCCATCCCCACGCACAtccgcaccagcagcaccagcagcatcagcagcaccagcaggccGCTGCAGCCGCCCAGGCAGCCGCCGCCCTGCACCACCAGAACATGCTGCTCACCTCGCCCGGCCTGCCGCCCCAGCATGCCATCAGTCTGCCCGCCTCGGGCGGCGGTGCTGTCACCTCCGTGGGCGGTGGCTCCAATGCCGGCGGCCAGGGCAATGCCGGCGGACCCGTTGGGCCACCGTCGGGCCCGGCTGGCGAGAAGAAGCCGATGCTGATGCCGGTGCATGGGGGCGCACATGCGCCCAATGCGATGCGCAGCCTGCACCAGCACATGTCGCCCACCGTCTACGAGATGGCCGCCCTCACCCAGGACCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCGCTGCTGGCGAACAACATCGGGCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTCAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCGTTCATCCGGATGCAGCTGTGGCTGAGCGACGCCAACAATGTGgagcggctgcagctgctcaaGAACGAGCGGCGGGAGGCGAGCAAGCGGCGCCGCAGCACCGGCCCCAATCAGCAggacaacagcagcgacaCCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGACCCGGCTCTGTGGGCTCCGTGGGCGGTGCGCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTccgaggagcagaaggaggcgCTGCGGCTGGCGTTCGCCCTCGACCCGTACCCCAATGTGGGCACCATCGAGTTCCTGGCCAACGAGCTCAGCCTGGCCACACGGACGATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAACCCCATACCGAGTCGGGAGAACACCAATGCGACGCCCTTCGATCCCGTCCAGTTCCGCATCCTCCTCCAGCAGCGGCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGGGCGGTGCGCCCATACCCTACCCACCGTACTTCGCGGCGGCCGCTCTCCTCGGCCGCAGTCTGGCGGGAATACCgggcgccgctgctgctgcaggggcagccgccgccgcggcGGCTGTTGGTGCGGCCGGTGTCGGCGTTGGTgatgagctgcagctgcaggcccTCAACCAGGCGTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAGGACGACCTGGAGATGGACGCCAGTGGCCACAACATGAGCGACAACGAGTCGCTGGAGGGCCAGGAGGCGGAGGACAAGGCCGTCTCCGAGTACGAGAAGGTCCTGCAGAAGTCCGCCCTCGCCTCGGCGGCTGCCGCCTACATGAGCAACGCGGTGCGCAGCTCCCGCCGCAAGCCGGCAGCCCCCCAGTGGGTGAACCCCGCTGGCACCACCACCCCCAATGCGGgactggcagcggcagccgtcgcagcggcagcagctgcagccgctgtAGCGGCACAGTCCGGCGCCGGGAGCGAGAGCGAGCGCATCATCAACGGCGTCTGTGTGATGCAGCAGGGCTCCTCCGACTACGGTCGGGACGAGGCTGATGGCAAGTCCGTGGAGGCTGGCGGCGGCGACTCGGAGCACGAGCACGCCCAGCTGGAGATCGACCAGCGGTTCATGGAGCCCGAGGTGCGCATCaagcaggaggaggacgacgatgaggaggaggaccagcagcaccagcagctgcagcagcagctgcagcagcagctggatggTGGCCTCGACTGCGAGGCGGAGAAGAAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTCAGCCGCCTGAGCAGCAACGGCGCCCCCGGCCAGGTTGACGCCGAGGAATCGTCAGCGGCCTGTGTCGCCGCCAcaggaggagctgctggcaGCGGGGCTGTGGCAGCTGCCCAGGCGGTGGCCAGTGTCGCGCCAGCAGCCGCGTGGAACTACTAG
- Protein Sequence
- MQPTLPQAAGTADMDLTAVQSINDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLSTSNTDPASGSIHSDSDNHNHNTGAAAGGGAAAAEGEAGVQEIDDSDLELASGGGGSGSGHQLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQQNGGGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAVQQQQQHQHSPLHSPAAEAAAAAAAVGPTDHQTVAEATATTTHTATTTSSSSNTTNSSGSRSRGSLHHNEDEEQDDEDDEDDEEENASMQSNAAHLDDDDDDMELEPHQSLEAIESAARTEPHQQQQQQQQRQRHVAGDAGDLEEASAVAAVASATDPDSDPVADDMEASLNVSNNHNTDSNNSCSRKNSSNNSVGTGVALRDSNDDMDDPHVATSVHSAEDDDCTNNNTNTSNNNNNKNNGGSSNNNNNEKRKKRNNKTNSNSNNQPAVQIAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNSQSSDNNKVNAASPSLEAAASASSNDLDATQASVQAEDDEEEEEEDDHHQAMLVDNDEGEEAASTTHQHQQVDEEDDDEEDEDAEDQDHHRAKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLMERTKALAAEAIKNGAANAGSHPHHHHQQQQQQSHHQHQHHQQQQQHHHLQQQSQQHSSVTNSSSNSSSCNSGPGSTTDGALNHHHSLGHGHHLVGHNPHGLPHGHPHGQLLHPAAAHHLHHADSNSSSANSTPSSTAQLAASLASTLNGSKSLLQAAAAANAAAVAAGAVAEDNNNGLTPNANAAAAAAAMAAHAQHAAALGPGFLPSLPAFQFAAAAAANQDGRGHYRFADAEMNLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGGGGGDDSMSEDRIAHILSEASSLMKSTAAQQQRDQQDQQRRHAGEDTHSNEDSKSPPQSCTSPFFKVEQQLKQHQHREQQQQHMASEQRDAVVAAAQQQHQQHQQQREQREREREQQQRLRHEDLAQDKMARLYQELIARTPREAAFPSFLLSPFFGGAAGMPGAANAFPVPDENMRHAFEREIAKLQQQHQQQQAAQAQAQAQAVSGFPNFSSLMALQQQVLNGAQDLSLAAVKDIKLNGQRGSLEHSSSSSKDGDRDDPRDYPQSLHGRKSDTPAPPAPPAPPSGSAGSVPGSANSLASARDGVGAGAGSGGAGSHASNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAVAMSAAMQQQQQQAAAAAAAVAAQQQSQHQHPHQHPHPHAHPHQQHQQHQQHQQAAAAAQAAAALHHQNMLLTSPGLPPQHAISLPASGGGAVTSVGGGSNAGGQGNAGGPVGPPSGPAGEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLGGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAVGAAGVGVGDELQLQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLEMDASGHNMSDNESLEGQEAEDKAVSEYEKVLQKSALASAAAAYMSNAVRSSRRKPAAPQWVNPAGTTTPNAGLAAAAVAAAAAAAAVAAQSGAGSESERIINGVCVMQQGSSDYGRDEADGKSVEAGGGDSEHEHAQLEIDQRFMEPEVRIKQEEDDDEEEDQQHQQLQQQLQQQLDGGLDCEAEKKLKVINEEKLRLVRVSRLSSNGAPGQVDAEESSAACVAATGGAAGSGAVAAAQAVASVAPAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00471398;
- 90% Identity
- iTF_00480766;
- 80% Identity
- iTF_00563804;