Basic Information

Gene Symbol
Arid2
Assembly
GCA_018151105.1
Location
NW:245644-251202[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-25 3.2e-22 78.4 0.0 2 89 80 166 79 166 0.93

Sequence Information

Coding Sequence
ATGACCTCAAGCATCGATAGTGTGCGCGtgctgctgcagtcgctgCCTGCAGCGGCCGCCGCCTTgggtggcagcaacaacaacgccCAGCAAATCGAGCAGCAGTCACCGGCAAAGGGGCTCGGAATGCTGCTACCAACAACAACGCCTTTGCGCGCCAGAAATCCAtaccaacagcagccacagactCCGGCGCCTTTCACGCCGGAAAAAACTGAAGGGAAACCTGCGTCGGCGCCCGAGGAGTTCTGGCGTGATCTGCAGCAGTTCCACGAGAGACGCGGCACTCCATTGACCCATGCGGCCAAGATCAGTGGCAAGCATGTGGACTTGTATAAACTCTACACTGAGGTCACAGAGCGTGGCGGCTTCAACAAGGTCAACATGCGGGACGAGTGGGAAGAGGTGTACAGTGCCATGGAGACGCTAAGGGAACGCTGTGTAAATGGCACGGCGGGCATCAAGCATATCTACCGACGGTATCTGGACAAGTACGAGCGGCTCAACTTCTTTGGCGAGGATCCGGACAAAATGGAGGCTCTGGAGGCGGCCATTGAGAATGCTGAGATGGGCAGCGGACGGGCCCGATCCCGCGCATTGGCCGGGGGAGGCGGCGGCCTTGGCAGCATCTTTGGATCCTCGCACTCCACACTGCCAGCGGTGCCCATGTCCTACAATCAACGCCAGCACATCATCAACGTGGACCGGCGACGGCAGTACAAGATGTCCACACAGCTGCACAAGCACAGCAGCTAcgagaagctgctgctgtccctgcTCTCGCCGCTGCCCAACGAGCAGGACTTTGCCATCAACGTGTGCACCCTGATGGCCAACGAGGTGCGGCACACCCTCCAACTGTCCGATTGCCCCAAGCTGCTGGACGTGCTGCTGGCCCATCTGGGCGTCTATGCGGACTACACCATGCGCAAGCTGTTCCAGCACAGCTACGCCGAAGTGCGCCACCACTCGCAGCACAATTTCTGGCGCGACCTGCTCTACGACAAGCCGCAGGTACTCGAGCTCTATACCGACGAACAGGCCTGGCTGGACAATGGCCTCATCAGCAAGGAGGACAAGGACGAGCAGGAGAACTCCAGCGCTCGCAACGAGCTGCTGGCGGCATGCGATGAGCTGGACTTTTTGAATCTGCGCCGCAGCAATGGCACCGACGAGCGCATGGGCCAGCGCGTGCTCCAGATAGTGCAGCTCGTGCGGGCGCTCAGTTTCCATCAAGAGAATCAAATACCGCTGGGCTCCAATCGCACGCTGTGGCGGTATCTGGTCATGGGTGCCAATGTACGCTGGAGCAACATCCACATTCAGGCCCTGGAGACGGCCGGTAATCTGGCGAACCAGTTCGAGCTGCAGGACCCCACCACGGACGAGCTGTCGCGGAATCTGCTGGCCACACTCTGCGAGGGCATCGACTCCAACGACCGAGCCGTCATTATCAGCTGCCTCGAGATCATATACAAGCTGTGCGGCAGGGAAGGCAACTCCCAGTACATAAACCGCTGTCTGGGCCTGGATTTCTATCAGCGCgccatgctgctgctctcgCTAACGGATGTGATGCTCCTCATCTTCACTCTGGAGGCAATCTATGCCCTAAGCTCGCTCGGCGCCCGTCCCTGCTCTCTGCTGATGCAGGTGCGTGGCCTGGTCGACCAGCTGGTGGCATTGATATCCGTCGAGGCGCAGACCTATGGAGCTGACGGTTGCATTTTGATGCGCGTCGTGGAGATGGTGCCGGGGAATCTGATTAATTCGCTGGCCACAAATCCCACGGCTGCcacggctgctgctccatccGCCCAAGTGGTCGTCAAGCCGCCTGCCGCTCTTCCAATACCGACGCCCGCCCAGACACAGGTCCTGCAATCGCAGACAGAGCAGCAGGTTGTGGCTCCTCCGGTGCCTGCTCCGCCTACTCTTCCCGTTCCGAGTCTGCCGCAGGTTCCGCTGCCACTGTCGCTGCCGGTGCCCAGTCTGCCACAGGTTATACTGCCGCCGGGCGTTGTCTCCATGGCTCTGCCAGCCCCACCCTCCGCGCCGCAGAGTTTCACACACGACGACGAGCAGTACGCTCTGGCCTGGCTGGGAGCCACCTACGAGCGAGCAGGCGCCGGCCACGAGTTCCGcctggagcagcaggagctgtaCAGGATATACCTGTCGCACTGCCAGAAGGCGGGCAAGCTGTCGGTGGTCAATCACATGCAGTTCCCACGCCTGGTGCGCCTCATCTTCAACCAGACCGTGGGACCCGTCATCGTGCGCCACTTGGACGGCACTGAGCTGCCGGGCACCTACTACGTGGGCATCCGGACGCGCGCCCAACCATTGGTCATGCAGCAGAAGGCCAATCCATCTGCAGTTCTTCTCAAGAAGGAAACTCTCATCCTGCCCAAGCCGCAGTCGGACTCAACGCCAACGGAAGCAGCCGAGGAGACGGCTCCTCCtgcgcccacgcccacgccgcCCACCAGCTCCTCCCTCATCAAGAGTCTCCTGGCCAACAAGGTGACCGAGCGtcagcagaagcaaaaggCACAGGTGCTGTCGCAGTCGCCCCAGCCCCCGGCCCTGGTGCCCACCACAGCCTCCGCATCGAGTGCCCCCTCCAACCAGCCCATCAAAGTAACTTCCACGGCCATCAGTGCCTTCGTGAACAATCCGCTGATGCAGCACACGCCGGTGAAGGTGGGACAGACCACCATAAAGCCACTCCATCCCCAGATGGCAATGGAGAAGAAACCAATCACCGACTCGGCTCCGCCCCCACTGGCTCCGCTTAGTGGGGCGAATGTTGTGACCAAGGACGCCAGTGGACGCACCCTTATAATCTCGGCAGCCACCAAACGAAAGCTGACCATCGACGACGAGCAGAACAAGCGCCTGGCCCTGGAGAacgcctcctcctccggcAAGGAGGAGCCCCAGGTGACGCCCTCAAAAAATGCCGCCAATCTGTATGCGGACCTGGCTGCCTCCATACTGGAGGATGAGGACTTGGATGACGTTCCGCCATTGGCCAAGCCAAGTCAGGagcagcctcagcagcagcatcaacaacaacaacagcagcaacagctgcaactCATCCCAGCCAAGGTGCAGTCCACCCAACGTCAGCTGGTCTTCCCCGGCAGCAGTAGCTCCTCTCCCGGCCCGCCACCGCAGCTCAAGCTGGCCACTACGGCCACCATCAAGACGGACCAGGGCCTACAGACGGTGCCGGTGATCCTGCAGCCGAAAACGTCGATGGATGCCTCCCCGGCCCAGCAGACAACGCAGTACGTCCTGGCCACGAATCAGCAGGGTCAGACCTACCTGGTGGCACAGCAGACACAGCCCGCCCTTCCGCCAACCTCTCAGTCGGCACCGCCCACGCTGCTGGTCACACAGACGCCTCAGCAGCAGACGAAGACCATCATCatactgcagcagcagccgggcGGAGTGTCCGCTGCCAGTGTGCCTGGCACGCAGAAGATGATCATGACCACGGCGCAGGGCCAGCAGGTTCTGGTCACCACCACCACGGCCCCCCAGCAGCCGCAGACACGCCCCGCCagccaacaccaacagcagcagatctTCATCACGCCCCAGAGGCCAGTGGCATCACTGGGAGCAGGGCAGATGTCCCCCTCCCTGCTCTCGCAGCTGAATCAGATTCCGGCCACCATCAAGCTGCatcagccacagccgcagctcgCCTCGCCGCAGGTGACGGCTCAGCAGCGTCTGGCAGCCGCCAAGGCGGGAGCCACATTGCCCATAccgcagttgcagcagcaccagtCGATCATCCAGCAGCACATCATCTCGGGCCCACCCggagctccagctgctgctgcgcctggcGAGAAGCGGCAGCTACTTCTCAGTGGCATGAAAGAAACGACTCTCATCACCCAGACACCGGCCACGGCGGCTCCCCTGCAGCAGAGCCAACTCAACTCGCAGACGATCATCACCACGCAGCcgcccacagccacagccatggggggcatgcagcagcaacacatcCGCACCGTTctggagcaacagcagcagcaccatccatccatcattCAGCAGAAGATCACCATGCCTGTTATCCCGGAGGCGACTAAGCCCGTTACTGGCGGCGCTATAGCCAAGAAGCCAATGCAGCCACAGTTTGTGCCCGCTCTGAAGCCAACGCTCTCACAGATAGTGATGAGTACCGGCGAATCCACATCGACAGTGTCCGGCAAGCCGCTTTCAGTCCTGGCCGAATCCAAGCCAGTAGAGTACACTCAGGCGGCAAATAGCAGCACCTCAGTGGTGATCAGCCAGGTGCAGACGGCGCCTCTGTACGCCACTCCGTCTGTGACAGGAGCTCCCATTGTCGCTGCCAGTCCCTCGCCCGTGCCCGTGGACGTGAATTGGCTGTTCATCTGTGACTGGCGCAACTGCCCGCGGCGCAAGTTCAAATCACTCAACGACCTCAAATATCATGTGGTCAATGTCCACTGCCCGGACCACctggatgccgatgccgacaTCTATTGCCAGTGGGGCAGCGGTCCCGCCTTCTGCGACAACAGAGCTCGTCGTCGCTACTCCCTGATGACCCATCTGATCGATCGTCACCTGGCCTTGGATAATCTACGCGCCGGCGTGCAGCGTCGCCTGGCCACGGGCATACACAATGTGGCGCCTGCCCAGCCGCCCGTCACCATTGTGCGGAACGAAAGTCATGCCCAGAAGCTGGCGGGTGGCAGTGCACCGGCTCCAGCGCCGGCCCCCGTGGTGGGCAGTGCGGCGATGCAGGCCATGAATCGGCACACAACGGACTACACCAACTCCAAGGAGCTGATGGACGAGAACGAGGGGCCCGTCACCAAGAGTATTCGTCTGACGGCAGCACTCATTCTGCGCAACCTGGTAACCAACACGTCGACGGCCAAGCGCAGTCTGAAGCGCTACGAGCCCCACCTGGCCAATGTGGCCATGAGCAACGTGGAGGCCAGCGCCGTGCTTTCCCACATCATGTACGAGCTGAGCCAGTAG
Protein Sequence
MTSSIDSVRVLLQSLPAAAAALGGSNNNAQQIEQQSPAKGLGMLLPTTTPLRARNPYQQQPQTPAPFTPEKTEGKPASAPEEFWRDLQQFHERRGTPLTHAAKISGKHVDLYKLYTEVTERGGFNKVNMRDEWEEVYSAMETLRERCVNGTAGIKHIYRRYLDKYERLNFFGEDPDKMEALEAAIENAEMGSGRARSRALAGGGGGLGSIFGSSHSTLPAVPMSYNQRQHIINVDRRRQYKMSTQLHKHSSYEKLLLSLLSPLPNEQDFAINVCTLMANEVRHTLQLSDCPKLLDVLLAHLGVYADYTMRKLFQHSYAEVRHHSQHNFWRDLLYDKPQVLELYTDEQAWLDNGLISKEDKDEQENSSARNELLAACDELDFLNLRRSNGTDERMGQRVLQIVQLVRALSFHQENQIPLGSNRTLWRYLVMGANVRWSNIHIQALETAGNLANQFELQDPTTDELSRNLLATLCEGIDSNDRAVIISCLEIIYKLCGREGNSQYINRCLGLDFYQRAMLLLSLTDVMLLIFTLEAIYALSSLGARPCSLLMQVRGLVDQLVALISVEAQTYGADGCILMRVVEMVPGNLINSLATNPTAATAAAPSAQVVVKPPAALPIPTPAQTQVLQSQTEQQVVAPPVPAPPTLPVPSLPQVPLPLSLPVPSLPQVILPPGVVSMALPAPPSAPQSFTHDDEQYALAWLGATYERAGAGHEFRLEQQELYRIYLSHCQKAGKLSVVNHMQFPRLVRLIFNQTVGPVIVRHLDGTELPGTYYVGIRTRAQPLVMQQKANPSAVLLKKETLILPKPQSDSTPTEAAEETAPPAPTPTPPTSSSLIKSLLANKVTERQQKQKAQVLSQSPQPPALVPTTASASSAPSNQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQMAMEKKPITDSAPPPLAPLSGANVVTKDASGRTLIISAATKRKLTIDDEQNKRLALENASSSGKEEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAKPSQEQPQQQHQQQQQQQQLQLIPAKVQSTQRQLVFPGSSSSSPGPPPQLKLATTATIKTDQGLQTVPVILQPKTSMDASPAQQTTQYVLATNQQGQTYLVAQQTQPALPPTSQSAPPTLLVTQTPQQQTKTIIILQQQPGGVSAASVPGTQKMIMTTAQGQQVLVTTTTAPQQPQTRPASQHQQQQIFITPQRPVASLGAGQMSPSLLSQLNQIPATIKLHQPQPQLASPQVTAQQRLAAAKAGATLPIPQLQQHQSIIQQHIISGPPGAPAAAAPGEKRQLLLSGMKETTLITQTPATAAPLQQSQLNSQTIITTQPPTATAMGGMQQQHIRTVLEQQQQHHPSIIQQKITMPVIPEATKPVTGGAIAKKPMQPQFVPALKPTLSQIVMSTGESTSTVSGKPLSVLAESKPVEYTQAANSSTSVVISQVQTAPLYATPSVTGAPIVAASPSPVPVDVNWLFICDWRNCPRRKFKSLNDLKYHVVNVHCPDHLDADADIYCQWGSGPAFCDNRARRRYSLMTHLIDRHLALDNLRAGVQRRLATGIHNVAPAQPPVTIVRNESHAQKLAGGSAPAPAPAPVVGSAAMQAMNRHTTDYTNSKELMDENEGPVTKSIRLTAALILRNLVTNTSTAKRSLKRYEPHLANVAMSNVEASAVLSHIMYELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2