Dobs013359.1
Basic Information
- Insect
- Drosophila obscura
- Gene Symbol
- grh
- Assembly
- GCA_018151105.1
- Location
- NW:10340578-10382690[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.38 2.8e+03 -2.9 1.7 92 109 180 197 169 225 0.51 2 3 0.18 1.3e+03 -1.9 0.3 78 109 473 504 437 535 0.59 3 3 2.3e-63 1.7e-59 200.5 0.4 24 221 643 835 629 837 0.94
Sequence Information
- Coding Sequence
- ATGTCCACATCCACCGCCACAACGAGTGTCATCACGTCCAACGAGCTCTCGTTGTCCGCCCACGGGCACgcccacgcacacacgcactccCACACGCACAGCCACGGCCACGGGCACTCGCTGCACCAGCACCCCCACAGTCGGATCGGAGTGGGCGTCGGAGGAGTCGGCGTAGGAATCGGTGTTggcgtgggagtgggagtcCTCAGTGACGCCTCTCTATCACCCATCCagcaaggaggaggaggcggcggcggaggcgcCAACAGTTCCCCCCTGGCGCCCAACGGAGTACCCCTGCTGACCACCATGCACCGCTCCCCGGACAGTCCCCAGCCGGAGCTGGCGACCATGACGAACGTCAATGTCCTCGACCTGCACACAGACTCCTCGAAGCTCTACGACAAGGAGGCGGTCTTCATCTACGAAACGCCCAAGGTGGTGATGCCCGCCGACGGTGCCGCGGACGATGCCCATGCCATCGATGCGCGGATCGCGGCCCAGCTGGGCACACAGCacgcccagcagcaacaacaacaacagcagcagcagcaacagcagcagcaacagcagcagcagcaacagacggAGCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAATCAAATCATCCGCGTGGTGGGACCGAacggcgagcagcagcagatcatcTCGCGAGAGATCATCAACGGGGAGCACCACATCCTGTCGCGAAACGAGGCCGGGGAGCACATCCTCACGCGCATTGTCAGCGATCCCTCCAAGCTGATGCCCAACGACAATGCGGTGGCCACCGCCATGTACAACCAGGCGCAGAAGATGAACAACGACCACCAGGCGGTCTATCAGACCTCGCCCCTGCCACTGGACGCCTCCGTGCTGCACTacagcaacgacaacagcaacgTGATCAAAACGGAGGCGGACCTCTACGAGGACCACAAGAAGCATGCGGCCGGCGGGGGCTCCATCATTTACACCACCTCTGACCCGAATGGCGTCAATGTGAACGTGAAACAGCTGCCCCACCTGGCCGTGCCGCAGAAGCTCGACCCGGACCTCTACCAGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAGACCGTCATTTACTCCACCACCGACCAGAAGGGTCTCGAGATCTATTCGGGCGGCGACATTGGCAGCCTCGTCTCCGACGGCCAAGTTGTGGTCCAGGCAGGCCTCCCCtatgccaccaccaccagtgCCACAGGCCAGCCCGTCTACATCGTTGCCGATGTCACCGACGACCATCTACAAAGTGGAAAGCTCAATGGCCAGACCACACCCATCGATGTCTCGGGCCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCCCACCCCTCATCATCGGCCTCGGCCGTCAGCACCACCGGCGTTgtctccaccaccaccatctcgcagcaccaccagcaccaacagcagcagcagcagcagcagcagcaacagcaacagcagcagcatcccggCGACATTGTGAGTGCCGCAGGCGTGGGGAGTGCAGGCTCCATTGTCTCCACGGcggtgcaacagcaacaacagcagcagcagcagctgatcaCCATCAAAAGGGAGCCGGAGGATCTGCGCAAGGATCCGAAGAACGGTAACATTGCCGGAGCGGGGGCAGCGAACGGCGGAGCGGGTTCGGTCATAACGCAAAAGTCCTTCGATTACACGGAACTGTGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTGTCCGTGAACAGCATCCAGCAGCGGACAGTGGTCCATGGCAGCCAGAACAGTCCCACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGTTCGCGGCCCTGGCATGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaaaaatATTCACAAATGTTGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCGTCACAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTATGGGATCACGCTGGAGTATGTGCACGATGCGGATAAGCCCATTAAGAATACGACGGTTAAGAGTGTGATCATGCTCATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTGCAGTGCCTGAGCACGGATTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACGCGCGATGAGGAGCGACGGGCCGCCAAGCGAAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGATCAGAATATTATGACCAGCACACCCATGACCGACTTCGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCAACCTCGGAGCGTGTGATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACACCGCTGCATGTGGTTCCCCCCACCACAATTGGCCTGCTGAATGCGAttgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAGGTGCAGCAGATCGAGGACGATCTGTACGATGTGACGCTGACGGAGCTGCCCAATCAGTAG
- Protein Sequence
- MSTSTATTSVITSNELSLSAHGHAHAHTHSHTHSHGHGHSLHQHPHSRIGVGVGGVGVGIGVGVGVGVLSDASLSPIQQGGGGGGGGANSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPADGAADDAHAIDARIAAQLGTQHAQQQQQQQQQQQQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHQAVYQTSPLPLDASVLHYSNDNSNVIKTEADLYEDHKKHAAGGGSIIYTTSDPNGVNVNVKQLPHLAVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVTDDHLQSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASAVSTTGVVSTTTISQHHQHQQQQQQQQQQQQQQQHPGDIVSAAGVGSAGSIVSTAVQQQQQQQQQLITIKREPEDLRKDPKNGNIAGAGAANGGAGSVITQKSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00602349;
- 90% Identity
- -
- 80% Identity
- -