Dnov009370.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila novamexicana
Gene Symbol
srp
Assembly
GCA_003285875.3
Location
NW:627067-653881[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-18 6.5e-15 54.0 2.7 1 35 989 1022 989 1023 0.97

Sequence Information

Coding Sequence
ATGCTTTGCATGTGTGTATTGGCTAACATGACCAAGACTAACAAAGCAAAGGACAAGGACAAGAGCAGTGCAATGCCGCGTGTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAAGCATTGGTCAATGCCAAAAAGCAAGCAGTGCAAAAAGGAGCGGGCGGCGACAAGGCAACAGGatcaaatgcagcagcagcagcagcaacagccacaaccacAGCcatagccacagccacagcataCGGTCAAACGCAACAGGCGTTCGCTGTGAAAGAGACGACAATAGCGGCGCAGGAgaacggcgacagcgacagcagcgacgcgcataagcagcagcaacaacaacaagcagcgacgtcgacgtcgccgttGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCAGACATCAGTTGCCAGCGAAACAGCGAAGCAAGCGGTTACCAGcgcagcaacaccaacagcagcagaaataacggcaacagcaacagcaacagcaacaacaacaacatcaacatcaacaaacATCGCAAATACTTATGTTTATGCTGAGAACAGCGTAAGGCAGCAGCCCAACAGTTGTGACGTCACTAGCAAAGTTGTGGCAGACGAAGCGGCTAATAACAATCAAGATAAAGTCGAGCCCAGAAGCGAGAGCAAAACGAAGATagagacagcagcaacagcagcaacaacgacaacaacaataacagcaagcgataaatattacaaaatagtTGATAAGTGTAAAAGTGAGATAAGTGAtgaaaacacaacaacaacatcaacaacagcaacaattttgccGGTAGTAgtgataaataataatcagCTAAGCGACGCGAGTGAAAGTGTtgacaacaaaatcaaaagtgaAACAAACGAGCAAGAAcaaacagcagcggcaacggcaccagcaacagtaacaacagcatcagcaacatccGAATTGCCGTTACATTATCGCGGCCTAAACAACTCGGTGATTATAGCCAACTAtgcgcatcagcagcagcagcaacatcagcaacatcagcagcaacagcagcagcaacaggcagaGCAAGAACAAATCTACGAGCAGCAACACTTTttacagcagcagcttttaaatcaacagcaacaggagcagcagcagcagcaacaacaacacgccaGCTGGTTGGCCTACAACAATTGCGCCTACGACTTAACCAGcaacagcgcagcagcagcagcagcagcagcggcggcagcaacacAGCAGGAGAAGAGTGAATTTTATGCCTTGGCTGCCTCGCAGCAATTGTTGGCGCATTTTCCCTATCACCAAACGCATTTGtacgaacagcagcagcagcagcagcacagcgccagcagcacGGATTCCATAATGCGCAACAACTTTACGCTGTACAGCGTTTATGGTggaggcggaggaggaggcggcggcggcggcggcggtggtgtcACGCCCACCACACACGAGCAacatcagctgcagcaacatgttgccgctgtggcagcagcagccgccaatTCGGTAATTgtccacacaacacacacaacacccAACATTGATGAGGTCATACAGGATACGCTGAAGGATGAGTGCTTCGACGATAATCACAGCTCCAGTTATCACATGCTGACCGCCGTCTCCGATCTGCAGGTGCTTAAGGAGGCCAATGCAGCCATTTACTCCATGACGCACGAtcagttgctgcagcagcaacagcagcagcagcagcagcagcatctgcatcaacatcagcatcagcatcaacaccatcatcatcatcatctgacgcagcagctgcagcatcatCATTCCCATACGCAGCAGCATCACAACAACTCGGCCAGTTCGGTGGGCGGCGACTCGCCCTCGCCCTCCCACACGCTCGCCGCACATGCCAGCgatgtggcaacgctgcaaAGCTTCACACAGCTAACAAGCGCGCCGCCCAGCAGCGGGCTGCATCGCGACAGCTACGGCAGCCTCTCGCCGGATCACGGCAGCTATTTCAGTTCACCGCTCAGTCCGGTGCTGCAGACCAGCTCTGTCTATGCAAGTCCTTTGCTCGCATCGGCCGCCAATGGCATGCAGTATGGTATGCAAGCAATTTCCTcgcccacccacacacacgcccagctgcagcagcaacatcaccaaaaccagcagcagcaacatcagcaacagcagcagcagcagcagcaacaacatcatcagcatcacaATTCCACCAGCAGCAGTCCTGGCCCAGTGGGTCTGCACCACACGAGCGGCTCGGCGGTTGGGCACAGCTCGCTGCTGGACGACGGCTACGGATCGCCCAAAAGCAGCCACAGCGGCAACGGCGGAGGTGGCACCTTGCCCGCCTTTCAGCGCATTGCGCCGGCCAGCGGCGGTGCCGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGCGGCGCCGAACGGGCTTCTGGCTACGCATCGCTGGCCAATTACCGCACACACGCCGATGGTTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCAATGCCACCGGTCAGGGGGGGCAATTGGGTGGCAGCGGTGCAGCGGCTACCAATGTGATATGCAATCGACGCGCCgttgctgccgcagctgcggcCGCAGCCGCTGTCGATGGTGCCGCCAACGCCGTTGATCCTGCCCGCTTCCTGGCCAACGCCGCTCATCTGTCTGCTTCGGCATCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAACGTGACCACCGGTAGCCGCAGTAAGGGCTCCACAAATGCCAACAGCGCTGCCGGTTCCGGCGCAGGCTCAACGTCAGCGACGACGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCCAGACGTGCTGGCATGTCCTGCTCCAACTGCCAGACGAGCTACACATCACTGTGGCGCCGCAATCCAGGTGGCGAGCCCGTCTGCAATGCCTGCGGCCTCTACTACAAGCTGCACAATGTGGTGCGCCCGCTGACCATGAAGAAGGACACCATACAGAAACGCAAACGCAAACCGAAGGGCACCAAGAGCGAAAAGTCCAAGAAGATGAGAACCACGCAGGCGGCTGGATTggtggccaacaacaatgccaatgccaatgcctgCCACAATGTGGGCATGCAGCTGGAGGGGCATGGTCAGCAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATACGCATCGCAGCAACAgcttcagcagcaacaactaaacACTGAGCAACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCCAATGCAACAtctcaacagcagcaacagcaacagcaacagcagcaacagcagcaccagcagctaTGCGCTGGCCTGGACATGTCGCCCACATCCTCTTATCAAATGTCGCCTATTaacatgcaacagcagcagcagcaacagcagcagcagcaatcatGCAGCATGCAACATTCACCTAGCACGCCCACATCAGCCATGTCACAGTCCATTTATTCCACGCCATCGCCTACGCAGCTtcatagcaacaacaacaatagcagcaacaacaacaacaacacattgttcaatcataacaacaacaacaacaatagcaatgagaataacaaacaaattatacaGAAATATCTGCAAGCTCAGCAattgagcaacaacagcagcagcagcgatcaACAATTATTGGCACAGCATCAACTTATGCACCTGATGCCGAACTCCAttacggcagcagcagctgcagcagcggcagcggcggcggcggcggcagcaatcAGCACAGCGATCAAATCGGAGGCGGTCACCAACACGaccaacaccagcaacagcaacagcatcagcagcaagcAATTAGCTGccacaacatcagcaacaacaccgACCGCGGCATCGAACACACTATCCTCTCTGAgtcacaacagcagcaacattatcAGCCTGCAAAGTGCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAATCGGCACTGAGCGGTCGCAGCTCATCGCCCTATTATATAGATCATCTAGCCGAGGAGGAGCAGACGGCCATTATTAAACTGGAGCAGTTGgatcaccagcagcaacagcagcagcaacagcaacagcagcatcaacatcaacagcagcatcagcaacacgATGAAATGTTGCTCAGTCGCTCAACTTCCATCGATGAGCACTATGAGCTAGCCGCCTATcatcgacagcagcaacagcaacagcagcagcagcagcagcagctacagcaacacacactgcagcaacatgttgcactCAGTCAGCATGAGCAGCAGATTGCCAGCTATGCGCTACACGCAGccgcacagcagcaactgcacgAATTTGGACGCAAATATGGCGTTGAGCGCGAGACAATTGTCAAAATGGAATAA
Protein Sequence
MLCMCVLANMTKTNKAKDKDKSSAMPRVPSNLLASAAKMKITKALVNAKKQAVQKGAGGDKATGSNAAAAAATATTTAIATATAYGQTQQAFAVKETTIAAQENGDSDSSDAHKQQQQQQAATSTSPLSPLATANLSSTFESKAQTSVASETAKQAVTSAATPTAAEITATATATATTTTSTSTNIANTYVYAENSVRQQPNSCDVTSKVVADEAANNNQDKVEPRSESKTKIETAATAATTTTTITASDKYYKIVDKCKSEISDENTTTTSTTATILPVVVINNNQLSDASESVDNKIKSETNEQEQTAAATAPATVTTASATSELPLHYRGLNNSVIIANYAHQQQQQHQQHQQQQQQQQAEQEQIYEQQHFLQQQLLNQQQQEQQQQQQQHASWLAYNNCAYDLTSNSAAAAAAAAAAATQQEKSEFYALAASQQLLAHFPYHQTHLYEQQQQQQHSASSTDSIMRNNFTLYSVYGGGGGGGGGGGGGGVTPTTHEQHQLQQHVAAVAAAAANSVIVHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDLQVLKEANAAIYSMTHDQLLQQQQQQQQQQHLHQHQHQHQHHHHHHLTQQLQHHHSHTQQHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAPPSSGLHRDSYGSLSPDHGSYFSSPLSPVLQTSSVYASPLLASAANGMQYGMQAISSPTHTHAQLQQQHHQNQQQQHQQQQQQQQQQHHQHHNSTSSSPGPVGLHHTSGSAVGHSSLLDDGYGSPKSSHSGNGGGGTLPAFQRIAPASGGAGYGNGVANGSGSGAERASGYASLANYRTHADGWSGHYEPISYAPNATGQGGQLGGSGAAATNVICNRRAVAAAAAAAAAVDGAANAVDPARFLANAAHLSASASLTAMAAESGGDFYKTFPFNVTTGSRSKGSTNANSAAGSGAGSTSATTSSVTSTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYYKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRTTQAAGLVANNNANANACHNVGMQLEGHGQQMDVNDEMKPLAYMSYASQQQLQQQQLNTEQHSSAASSPQSMASSSLSPNATSQQQQQQQQQQQQQHQQLCAGLDMSPTSSYQMSPINMQQQQQQQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHSNNNNSSNNNNNTLFNHNNNNNNSNENNKQIIQKYLQAQQLSNNSSSSDQQLLAQHQLMHLMPNSITAAAAAAAAAAAAAAAISTAIKSEAVTNTTNTSNSNSISSKQLAATTSATTPTAASNTLSSLSHNSSNIISLQSAYQQQALGQTEMPLCKSALSGRSSSPYYIDHLAEEEQTAIIKLEQLDHQQQQQQQQQQQHQHQQQHQQHDEMLLSRSTSIDEHYELAAYHRQQQQQQQQQQQQLQQHTLQQHVALSQHEQQIASYALHAAAQQQLHEFGRKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491174; iTF_00506517; iTF_00531346; iTF_00526969;
90% Identity
iTF_00526969;
80% Identity
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