Dnov000154.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- Arid2
- Assembly
- GCA_003285875.3
- Location
- NW:226165-232658[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-25 1.2e-21 76.4 0.0 2 89 93 179 92 179 0.93 2 2 5.8 1.1e+04 -3.5 0.0 28 65 1631 1670 1620 1683 0.70
Sequence Information
- Coding Sequence
- ATGACGTCCATTGACAATGTGCGTGTGCTGCTGCAGTCTCTGCCAGCAGCATCGCCTGCCgtcggcaacagcaacaacaatgcacagCAAAATGAGTCGACGCCGGCTAAACTTGGCGCTGCTGCAACACCATTGCGCGCGAGAAatacccagcagcagcaacaacagcagcaacagcagcagcagctgcagttgcaagcACATCCACAATTTTTTTATGGTACGCCGGAAAAATCAACAACTGGGGCCAGTGTTGGTGGCAAGCAGCTCAGGGCGCCGGAGGAATTCTGGCGTGATCTGCACCAGTTTCACGAGCGGCGCGGCACTCCGCTGACGCAGGCCGCCAAGATAAGTGGTCAGCACGTGGATTTATACCGGCTGTACCAGGAGGTCACGGAGCGCGGTGGCTTTAACAAAGTGAACATGCGCGATGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCTGGCATTAAGCATATCTATCGTCGCTATTTGGACAAATACGAGCGTCTGAACTTCTTGGGTGAGGATCCCGACAAGCTGGAGGCCTTGGAGGCGGTCATCGAGTGCGCTGATCTGGGCGCCAGCGCCAGTCGTGCGCGTTCACGTGCCTTGGCCGGCGCCAGCGTCGGGGGTGTAGGTGGCAGCTTAACTGGCGGCAGCTGGGGCAGCATTTTTGGCATGCCGCACTCCACGCTGACGGCCGTGCCCATGGCGTATAACCAGCGCCAGCATATGGTGAATGCGGATCGCCGACGACAGTACAAAATGTCGACACAGCTGCACAAGCACAGCAGCTATGAgaagctgctgttgtcgcttaTCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACGCTGATGGCCAATGAGCAGCGTCCAACGCTGCAGCTGAACGAGTGCCCCAAGCTGTTGGATGTGCTGCTGGCGCATTTGGGCGTCTATGCGGACTACAGCATGCGCCAGCTGTTCCAGCATGGGCACAACAATGCCGGCATGCAGGTGCGACGTCACTCGAAGCTTAATTTCTGGCGGGACTTGCTCTACGATAAGCCACAAATTCTGGACCTCTACACGGACGAACAAGCCTGGCTGGACAATGGACTGATCAACATGGAGAGCGACGCATGCAACGATTATCTGTTTCAATCGGATGAGCTCGATTTCGAGCTGGACTTTTTAAATTTACGTCGAAGTCATGGCACGGATGAGCGCATTGGCCAGCGTGTGCTGCAAATTGTTCAGCTATTGCGCAGCTTGAGTTTTCATCAGGACAACGTTACTCTGCTCGCCTCCAATCGTACGCTCTGGCGATATCTGGTCATGGGTGCCAATGTTCGTTGGAGCAACATCCACATTCAGGCCCTGGAAACGGCTGGCAATTTGGCGCAGCAGTTTGACCTACTGGATCCTGCCACGGACGAGCTATCGCGCAATCTGCTGGCCACGCTTTGCGAGGGCGTCGAATCGAATGATCGCGCTGTCATCATCAGCTGCCTAGAGATACTCTACAAACTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGTCTTGGCTTGGATTTCTATCAGCGTGTGATGCTGTTGCTCTCGCTGACCGATGTGATGCTTTTGATCTTCACGCTGGAGGCGATCTATGCGTTGAGCTCTTTGGGTGCGCGTCCCTGCTCGATGTTGATGCAGGTGCGCGGTCTGCTGGATCAGCTGGTGGCCTTACTAACCGTCGAGGCGCAATCATATGGCGCGGCTGGCTGCATTTTGATGCGCGTCGTGGAGGTGGTGCCGGGTAATATGTTGTCCACACTGGCACAGACCATACCGGGCACTCAAATGACACAGCTGATGACGGCcaagcagccacagcagccagcGCCGATTGCTGCACTGCCGCCGCCAGCGCCAACACAGGTCCAAGTGTTACCGCCACAGCCGGAGACCGTTTCGGTGTCTGTGCCTGCGCCTGCTCCAACGCATACGCCCGCGCCCGCCGCTGTGTCCCTGCCTGTGCCTAGTTTGCCGCAGGTGCAGCTGCCTGTGCCCAGTTTGCCGCAGGTCCAGCTACCGCCACCGCCAACCCAACAAGTATCGATGCCTGCTCCAGCGGCCGGCACAGTTATGCTGCCTGGATCGTTGCCCGCAGCGCCCTCAGCGCCGCAAAGCTTTACCCATGATGATGAGACCTATGCGCTGGCCTGGCTGGGTGCCACCTACGAGCGCGCCGGCAATGGTCATGAGTATCGCGTAGAGCAACAGGAGCTGTACACCATTTACCTATCGCACTGCCAGAAGGCGGGCAAGCTTTCGGTGGTGAATCGACTGCAATTTCCGCGTCTCGTGCGGCTCATATTCAATGCGAGCGTTGGTCCAGCCATTGTGCGCCAAATGGACGGCACCGATCTGCCCGGCACGCACTATGTGGGCATAAGGATGCGTGCTCAGCCTTTAcccatgcagcagcagcatcaacaacagcaacaacaacaacagcagaaggcagcagcaacggcgacggcaacagctgccaaaaaGGAGCCAGCGCTGGTGACCAAATCAGAGACAACAGCTGTAGACGCATCTGATGAAGCTACAGGCTCACAGACGCCCAGCTCCTCGCTGATTAAGAGCCTGCTGGCAAATAAAGTTAACGAGCGGCAGCTGAAACAAAAGGCCCAGGCCCAACCGCCTGCGCTGGTGGCCACCACAGCCTCAGCCACGGGCTCCCCGGCCAGCCAACCCATTAAGGTGACCTCCACGGCAATTAGCGCCTTTGTCAACAATCCGCTGATGCAGCACACGCCCGTAAAGGTGGGTCAAACCACCATAAAGCCGTTGCATCcgcagctggcgctggagAAGAAGCCAATGACGGACTCAGCACCACCGCCGCTGGCACCATTAAGCGGCTCCAATGTGCTTACGAAGGATGCGCAGGGGCGTACCGTAATTATACAATCCAAACGCAAGCTGACCATCGATGAGGAGCAAAACAAGCGACTGGCATTggatagcagcagcaacacgccCGCTGGCAAGGATGAGCCGCAAGTGACGCCCTCTAAAAATGCGGCCAATCTCTACGCAGATTTGGCTGCTTCGATACTAGAAGATGAGGATTTGGACGATGTGCCGCCGCTGGCAGCGTCCAgtcaagagcagcagcagacaactctgcaacaacaacagcagcagcagcaacaacaacaacaacatcagcagcagcatcagcagcaacatcagcagcagcatcaacaacaactgcagctcaTACCCGCCAAGGTGCAGCCCACACAGCGTCAGCTCATCTTTCCCGCTGGCAGTGCGGGAGCGCCACCGCCGCAGCTGAAATTGGCCACCACGGCGACCATTAAAACGGACCAGGGCTTGCAAACGGTGCCGGTCATATTGCAGAAGacagagcaacagcaacagcaacaacagcagcagccgacgcAAACACAATATGTGCTGGCCACCAATCAGCAGGGACAGACCTATCTGGTGGCACAGCAAACGGCgccagtggcagcggcagccaatgcgccggccacgcccacgctgCTGGTTACCCaagcggcgcagcagcagaccAAAACAATTATCATATTGCAACAGCCGGGTGTCAGTGCCAGCAATGTGCCCGGCACACAGAAGGTCATAATGACCACAGCGCAGGGTCAACAGGTGCTGgtgacaacaacgacagcgcCTGCGGTCGGCCAGCCACGGCCCGCAACCCAAgtccaacagcagctgcagcaacagcaacaaatctTTCTAAATCCGCAGCGTGCGGTGCCCGCCGCCTTGGGTGCTGGTCAAATGTCGCCCTCGCTGCTCTCGCAACTCAATCAGATACCCGCCACCATTAAGCTGCATCAGCCGCAGCCGTCGCAATCGCCACAGCTGCATCGTGGCGGCATTGTGGCCACCAAGACAGCGCCCATACCGCAGCTTCAGCAGCATCAGTCTATTATACAGCAGCATATCATCTCCGGcccggcggcagcggcagagaaGCGGCAGCTGCTCCTAGGCGGCATCAAGGAGACAACGCTCATCACACAAACGCCCGCCACGGCTGCCCCACTGCAGCAGAGTCAACTTAACTCGCAGACAATCATTACCACACAGCCGCCGGCAGCTACCACACCGATTGTTGGCgctgcactgcagcagcaacagcagcacatacgcagcgtgctcgagcagcagcagcagcatcatccaTCCATAATACAGCAGAAGATAACTATGCCCACAGTGCTAACGGAGACGGTCAAAGCTAAAgctgcgccagcagcagcaaccattGCCAAGAAGCCAATGGCGCCACCAACGCCTTCGCTGCctgcgcagcaacaacagcagcagccggtgCAAATGCCAGCGCTGAAACCCacgcaacaactacaacaacaaacgcagTTGGTCAGCAGCGAGTCGAAGCCCAGCATTATGATTGAAGCCAAGCCGGCGGAGCAATCCACaattacagcaacagcaacagttgcttcaatgccagcaacagctgcagcagctgccacagctaTTGCCtccaccacaacaacagcaacgagcaTTGTTAGCAATAGCAATCCAacagcagccggagcagctACCAGCGCTGTGCCCGTGGATGTCAATTGGCTGTTCATTTGCGATTGGCGCAATTGTCCGCGTCGCAAATTCAAATCGCTCAACGAGCTGCAGCACCATGTCTGCAATGTGCATTGTCCGGATCATTTGGACACCGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGTCCCAGCTTGTGTGACAACATAGCCCGTAAGCGTTACTCACTGATGACGCATCTGGTGGATCGTCATTTGGCCCTGGATGATCTGCGTGCGAGCGTGCAGCGTCGCCTTGCCACGGGCATACACAATGTGGCGCCCACCCAGCCAACGGTCACAATTGTGCGCAATGTGGGCAATGCCAGCAATGCGCCAGCatcaacagcggcaacaacagcagctgctgctgcgccagcgACAACGGCCACGGCTGTGGGAACCTCGGCGCTGCAGGCAATTAAACGACACTCGGCCGACTTTCTCAACTCCAAGGAGCTGTTGGATGAGAACGAGGGCCCAGTCACAAAGAGCATACGCCTCACGGCGGCGCTGATATTGCGCAATCTGGTCAATTACACTTCGACGGCCAAGCGCAGCCTCAAGCGGTATGAGCCGCATCTGGCCAATGTGGCATTTAGCAATGTGGAGGCCAGTGGTGTCCTCTCCCACATACTGCACGAGCTCAGTCAGTAA
- Protein Sequence
- MTSIDNVRVLLQSLPAASPAVGNSNNNAQQNESTPAKLGAAATPLRARNTQQQQQQQQQQQQLQLQAHPQFFYGTPEKSTTGASVGGKQLRAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAVIECADLGASASRARSRALAGASVGGVGGSLTGGSWGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEQRPTLQLNECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINMESDACNDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQDNVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLAQTIPGTQMTQLMTAKQPQQPAPIAALPPPAPTQVQVLPPQPETVSVSVPAPAPTHTPAPAAVSLPVPSLPQVQLPVPSLPQVQLPPPPTQQVSMPAPAAGTVMLPGSLPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKLSVVNRLQFPRLVRLIFNASVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPMQQQHQQQQQQQQQKAAATATATAAKKEPALVTKSETTAVDASDEATGSQTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASATGSPASQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDEEQNKRLALDSSSNTPAGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQQTTLQQQQQQQQQQQQHQQQHQQQHQQQHQQQLQLIPAKVQPTQRQLIFPAGSAGAPPPQLKLATTATIKTDQGLQTVPVILQKTEQQQQQQQQQPTQTQYVLATNQQGQTYLVAQQTAPVAAAANAPATPTLLVTQAAQQQTKTIIILQQPGVSASNVPGTQKVIMTTAQGQQVLVTTTTAPAVGQPRPATQVQQQLQQQQQIFLNPQRAVPAALGAGQMSPSLLSQLNQIPATIKLHQPQPSQSPQLHRGGIVATKTAPIPQLQQHQSIIQQHIISGPAAAAEKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPAATTPIVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPTVLTETVKAKAAPAAATIAKKPMAPPTPSLPAQQQQQQPVQMPALKPTQQLQQQTQLVSSESKPSIMIEAKPAEQSTITATATVASMPATAAAAATAIASTTTTATSIVSNSNPTAAGAATSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDTGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPTQPTVTIVRNVGNASNAPASTAATTAAAAAPATTATAVGTSALQAIKRHSADFLNSKELLDENEGPVTKSIRLTAALILRNLVNYTSTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00493429;
- 90% Identity
- iTF_00530738;
- 80% Identity
- -