Dnov006169.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- grh
- Assembly
- GCA_003285875.3
- Location
- NW:251938-295130[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.045 2.9e+02 0.1 0.9 78 110 461 493 426 534 0.57 2 3 2 1.3e+04 -5.9 2.2 100 101 750 751 730 766 0.44 3 3 3.5e-63 2.2e-59 199.9 0.5 24 221 883 1075 869 1077 0.94
Sequence Information
- Coding Sequence
- ATGTCCACATCCACGGCGACAACGAGCGTCATCACGTCGAACGATCTATCGCTGTCCGCCCACGCACACGCCCATACGCACGGTcacgcccacacgcacacgcatacgcacaccCgcgtcggcgtgggcgtgggcgtgggcgtagGTGGCCATCTGAGCGACGCCTCACTGTCGCCCATACAGCAGGGCGCCAACATAgtcgccagcagcaacagctccccTTTGGGCCAGAACGGCGTGCCGCTGCTGACCACGATGCATCGTTCGCCGGACAGCCCCCAGCCGGAGCTGGCAACGATGACGAACGTGAATGTGCTCGATCTGCACACGGACTCCTCCAAGCTCTACGACAAGGAGGCGGTCTTCATCTATGAGACGCCCAAGGTGGTCATGCCGCCGGATGGCAATGGGGCCGGCAatggaggcggcggcggcaacggcggGCCCGGCTCCAATGGCGGCCACGACGATGGCCAAGTGATAGACGCCCGCATCGCGGCACAGTTGAGCACACAGCACCTGACGGcgacacagcagcagcagcaacagcaacagcagcagcagcagtcggagCATCAGCCGCTGGCCAAGATCGAGTTCGATGAGAATCAAATTATACGCGTGGTCGGCCCCAatggcgagcagcagcagatcatATCGCGGGAGATCATCAACGGCGAGCATCACATCCTGTCCAGAAACGAGGCCGGCGAGCACATACTCACGCGCATCGTCAGCGATCCCTCCAAGCTGATGCCCAACGACAACGCGGTGGCCACCGCCATGTACAACCAGGCCCAGAAGCTGAACAACGAGCACCATGGCGTCTATCAGACCTCCCCGCTGCCGCTGGACGCCTCCGTGCTGCACTACGGCAACGACAATGTGATCAAGACCGAGGCGGAGATCTATGAGGATCACAAGAAACATGCCGGCGGCTCCATTATCTACACCACCTCCGATCCGAACGGCGTCAATGTGAATGTCAAGCAGCTGCCGCATCTGACGGGCGTGCCCCAGAAACTGGATCCCGAACTGTATCAGCCGGACAAGCACATCGATCTGATCTACAACGATGGCAGCAAGACCGTCATCTACTCCACCAGCGACCAGAAGGGCCTCGAGATCTACTCCGGCGGCGATATCGGCAGCCTGGTATCCGACGGCCAGGTCGTCGTGCAGGCAGGTCTGCCCTATGCGACGGCCACCAGTGGCACGGGTCAGCCTGTTTACATTGTGGCCGATGTCGAGGAGCATTTGCAGGGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCTTCGTCCGCCACAACCGGCGTGGTctccacaacaacaatctcaaatcaacagcatcaacagcagcaacatcagcagcagcagcaacagcagcatcaacagcagcagcagcagcagcagcagcagccgccacatCCCAGCGACATTGTAACCATAACCACCGCGGGCGTGGGGAGCGCGGGCTCAATTGTCTCCGctgcagtgcagcagcagcagcagcagcagcagcagctgctgagcaTCAAGCGTGAGCCCGAAGACTTGAGCAAGGATCCCAAGAACGGCAGCCTGGGCGCCTCAGCAAATGGTTCGGTCATAACGCAGAAGATATTGGGCGTGGATGCAGCTAGAACCGAAACTgaggcaactgcaactgcattcGAAATAGGCAATaatacagcagcaacaacaactgcaactgcaactgcaactagtCCCGCCAGAGCGACAGCGACAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACACCAGCAGAGCAGCAATGGCGCCAACACACAGCAGAGCACACTGCAAGCGCAAAGTCCCAGTCCCGGGCCGTATATCACAACGGACAGCTATGGCATGTATACGGCGAGCAGGCTGCCGCCCGGCCCACCGCCCGCCACCACATTCATAACGGAGCCCTATTATCGTGAATATTTTGCACCTGACGGCCAAGGCGGCTATGTGCCAGCGGGCACGGCGCGCAGTCTCTACGGCGAGGATGTATCCGTTACGGCGGCCACGCAGCCGCAGCCCGTGGGCGGCGTCTACGAGGCGCGCTTCAGCAGCAATGCGCCCACCACCACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcaacagcagcagcagcaacaacagcaacagcagcaggaacagtcGGGCAAAAGCGGCGGCACCCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTGGACTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAGAATCACATACAGCAGTCCTTCGACTATACGGAACTGTGTCAGCCGGGTACCCTGATCGATGCAAATGGCAGCATACCCGTTTCGGTGAACAGCATACAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACCAGCACAAATGGCTCGACACGTTCGCGGCCCTGGCACGATTTCGGGCGCCAAAATGATGCtgacaaaatacaaataccaaaaatctTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGGCGCGAAGACGATCGCATCACCTACATCAACAAGGGTCAATTCTATGGCATAACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGataCAAAGAACTCGGTTGGTCTTGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTATTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAATGCCTCAGCACGGACTTTAGCAGTCAAAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGGGACGCGACGGTCTTCCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCAGAGCGCAAGACGCGCGATGAGGAGCGCCGCGCGGCCAAGCGCAAAATGACAGCCACCGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCCGTGCTCTTCTCGCCCGCCGAGGATATGGAGAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAACTGAAGGGCGCCTCGCCTTTCTTGCTGCACGGCCAGAAggtggccacgcccacgctcAAGTTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAGAAGGATCATATACTGGATCAGAGCATGTTAACCAGCACGCCCATGTCCGACTTTGGGCCGCCCATGAAACGTGGCCGGATGACGCCGCCGACCACGGAGCGCGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGCTGCACGTGGTGCCGCCGACCACAATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGACATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAGGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAG
- Protein Sequence
- MSTSTATTSVITSNDLSLSAHAHAHTHGHAHTHTHTHTRVGVGVGVGVGGHLSDASLSPIQQGANIVASSNSSPLGQNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPPDGNGAGNGGGGGNGGPGSNGGHDDGQVIDARIAAQLSTQHLTATQQQQQQQQQQQQSEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKLNNEHHGVYQTSPLPLDASVLHYGNDNVIKTEAEIYEDHKKHAGGSIIYTTSDPNGVNVNVKQLPHLTGVPQKLDPELYQPDKHIDLIYNDGSKTVIYSTSDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATATSGTGQPVYIVADVEEHLQGAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISNQQHQQQQHQQQQQQQHQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQLLSIKREPEDLSKDPKNGSLGASANGSVITQKILGVDAARTETEATATAFEIGNNTAATTTATATATSPARATATDLEMYATTGGTQIYLQTSHQQSSNGANTQQSTLQAQSPSPGPYITTDSYGMYTASRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTAATQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00519680;
- 90% Identity
- iTF_00519680;
- 80% Identity
- -