Dniv012351.1
Basic Information
- Insect
- Drosophila niveifrons
- Gene Symbol
- ct
- Assembly
- GCA_035046325.1
- Location
- JAWNOC010000063.1:11030168-11065256[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.2e-27 6.1e-23 80.5 0.0 3 72 1170 1240 1168 1245 0.95 2 3 7.1e-32 6.1e-28 96.6 0.0 3 77 1681 1756 1679 1758 0.96 3 3 4.4e-31 3.7e-27 94.1 0.0 3 76 1960 2034 1958 2037 0.96
Sequence Information
- Coding Sequence
- ATGCTGTTGTCGTCTCCCCCGAAGGCAAGGGACTTTAGCGAGTTTGGGTGCTCGGCTTGGCGCGCTACTTTAGCCGAGAAGGAAGTGAATACACTCAAGGAGCAACTATCCACAAGCACGcccggcagcaacagcgacagcaacagcaacagcgacaacaacagtgaGAACAAtaacacagcagcaaccacagcagcagcagcagcagcatcgacagcagcagcagctggtctAATCAAAACCGAGGAGGAGGCAACGGGTGACAGCGACAAGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATCACGCTGCAGCAACAGAACGGCAGCAATCTGCTggccaacacaaacacaccgtCGCCATCGCCGCCGTTGCTGAGcgccgagcagcagcaacagttgcagagCAGTCTGCAGCAGaacggcgtcggcgtcggcgtcggtgGCGCCTGTTTGAATCCGAAGCTCTTCTTCAATCACGCCCAACAGATGATGATGgaggcggcagcggcagctgctgctgcggcggcagcggctgcggcggcagcgcaacaacaacagcagcaacaatcgccAATGCATTCGCCCgctgcagcagccaacagcaacagcaacagcaatacaacaacaacacaagcagcCACAGCGCTAGcaacaaacacagcagcaacagcagcaacaactgcgacaacagcaacacttcCACAGCCAGCTgaagcaacagccacagcagcagcaacaactgcgacaGCAACATCGGCTGgcaatgacgatgatgaggatgatgatgaggaggaggatgcATCGATGCAATCGAATGTGGCACATGCTGATGGTGAAgccgacgatgatgatgatgatatggAGCTGGAGCGTGAGCATATTGCTGCCGACAGTGGCAAtgttgctactgctactgctgttgctgttggtgttgagCAGCCATCAGCAAGAACTGAAAATATTATCGATGCGACGGCGACAACGCAACGCAAtaatgatgacgacgatgacgatgatgaggatgtTGATggtgataatgatgatgatcatgttGCGGAAGCGGagaacgacgacgatgacgatgatgatgatgaggaagCTAGTTTAAATGTTAGCAATAATCataagacaaacaacaacaacaacaacacggaTAGTTGTAGTCGAAAGAACAGTGAGAAGTCGCAACATGTTGCACTGcgtgataataataatgtaaatgaGCAACATGTGGCACACAgtgtcgacgacgacgacgattgcaccaacaacaacaacaccaacaacaataacaacaacacaacaacaaatgagaaGCGCAAaaagcgcagcaacaacaacaatcaacccGCTGTTTTATTAGCTGCCAAAGACAAAGAGGTAAGCAAGTCATCCTTACACACATCGCTGACTAGCATTAAAGCACTTTTGGATGAGCTGCAACGCCTGCGCGCTCTGGAGCAAACTCACCTGGTACAAATCCAAAGGCTCGAGGAGCACTTGGAGGTGAAGCGACAGCACATCATGCGTCTCGAGGCGCGTCTCGATAAGCAACAGATCAACGAGGCATTGGCCGAGGCAACTGCATTGGCAGCCGCTGTCAATGCGGcagccaccaacaacaacaacaataccaacaacaacaacaatagcaatagcaatatcaataataacaacaacacaaacagcagcaacaacaacaatcacagtaGCCAGAGCAGTGAACACAACAATGAGacgacatcagcagcagcagcagcagcagcaacaacaacagatctGACATCGACTCATCAgcacgatgatgacgatgacgatgataaCGATCATGAACACAATGAGCTgcgcgatgacgatgaggataTGGAAATCACCAGCAAcgatcaacagcagcagcagcagcaacagcaatcatcAGTTGCCAACAATCGTCGGCATATGGATGATGAGGAGGATGGCGAGGAGCAGGATACTGAAATGTCcaatgccacagccacagcggAGAGCAATGAGCTGAAAATCAAAAAGGAGCACCACAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCCCTCGCCGCTGCCGCggccgcagcagccgccgcagccTGCGCCAACGATCCAAACAAATTCCAAGCTCTGCTGCTGGAACGCACCAAGGCGCTGGCTGCCGAGGCGCTCAAGAATGGCGCCAGCGATGCGGTCAATGCCAACAGCGATGAGCAACAACGTGCAACCAGCAACgttgtggcaacagcaacaacagtagaagaagaagccacagcagcagcaaaagcaacagcagcagcagcagcaacatcagcgaGCAACAAGCAAGAAAATGAAACATTGCCCGATGCCAGTCTGCAGCCAAAGCTCGAAATCATTGACGACGATGTCGTTGCTGCCGATCAGGGGCAGACGCTGGAAGAGCAGCTCGTCAATAGCTATTGGAGGCGTGGCTTTgaaacgacaacagcaacagcagcagcagcagcacaagcaactgttgctgggAGCAAAACGCCAACAATTTATCAAAATGCCAATgcggtgcagcagcagcagcagcagcaactgttgccgcctccgccaccgccgccgccattgcagcagcaaccacaacaacagcactaTGCCtcgccacaacaacaacaacaacagcaacaacagccatatcagcaacaacaacaacagcagcagcaacatggaCCATCGTCCACTGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCAAATCGCCTAGATGCCGGACCACTTTCACATCcccatcaccagcagcagccacatcagcaacagcagcaacagctgccacatcagctgcaacagcaacatcacctcaacagcagcaatagcagcaacagcagcaacgatcCCTTggcccatcatcatcaacagcagcaacagcagcagcagcagcaacatcatcatgcACATGGCCAACATCATTTGCATCACTTGCATCACAACGATTCGAACTCATCCAGCGCCAACAGCACACCCAACAGCACCACAGCTCAGCTGGCGGCGAGCATTGCCAACACGCTCAATGGCAACAAGTCGCTGTTGcaggctgcggctgcggccaATGTggctgccgccgccgttgccgttggcgaggacaacaacaacagtctgACACCGAATGCGAATGCCGCTGTCGCCGCAGCGGCGATGGCTGCACATGCTCAGCATGCCGCCGCCTTGGGTGCACCCAATTTCTTGCCCAGTCTGCCCAGTTTGCCAGCGTTTCAatttgctgccgccgccgctgccggcCAAGATGCGCGGACGCATTTCCGTTTCGCCGACGccgagttgcagctgcagccgggTGTCTCGATGGCCGGCCGTCTCGGTGAGTCGCTCATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAAGAGATGCTGCGCTACAACATGGACAAATATGCGAATCAGGCACTCGATACGCTGCACATATCGCGACGAGTCCGTGAGCTGCTCTCGGTGCACAACATCGGCCAGCGGCTGTTTGCCAAATACATTCTCGGCCTCTCACAGGGCACCGTCTCGGAGCTGCTGAGCAAGCCGAAGCCGTGGGACAAGCTCACCGAGAAGGGGCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGACAACGCTGTCATGCTGCTCAAGTCCCTCATACCCAAGAAAGATTCTGGCCTGCCACAATACGCTGGACGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCATTGCCCACATACTCAGCGAAGCCTCGTCGCTCATGAAGAGCAACGCAGTTGTTGccgcccagcagcaacagcaacagcagcagcagcaggagcatcAACGTCGCCACGACGATACGCACAGCAATGAGGACAGCAAATCGCCGCCACAGAGCTGCAGTTCACCATTCTACAAGGTCGaactgaagcagcagctgcagcagcagcagcaacagcagcagcaacaacagcagcagcagcaacagttgcacgTCTCCGCGGAGCATGCGCAACGCGAGCAACGcgaagcagcagccgctgctgccgttgttgcccAGCAGCAACGCGAGCAGCGCGAGCAACGCGAAGCTGTTCAgcgtgagcagcagcagcgattgcGTCACGAGGACTTGGCTCAGGACAAGATGGCGCGTCTCTATCACGAGCTGATGGCGCGCACGCCACGCGAAGCAACCTTCCCAAGCTTTTTGTTGTCGCCATTCTTGGGCGGCGCCGCCTGCATGCCCGGTGCAGCGGCCAATCCATTCCCGACGGCCATGGCCACCGATGAGAACATGCGGCACGCGTTCGAGCGCGAGATCgccaagctgcagcagcaacaccagcagcaacagcagcaggcggcaCAGGCACAGGCGCAAGCCCAAGCGCAGGCGCAGGCAGCGAACTTTCCCAACTTCTCCAGTTTGATggcactgcagcagcaggtgcTGAATGGCGCCCAGGACTTGTCGCTAGCCGCTAGCAAGGACATCAAGCTGAATGGACAGCGCGTCGATCAGcacagcggcggcagcagcagctgctccaagGACGGCGAACGCATCGACGACGATCGCAGCAGTTTTCCCGCTCTGCCACCCGTGCGCAAATCCGAAGGCGGTGGCGGCAACACACCAGCTCCATCCGTTGTGCCTTCGGCCGTCTCAGGTGGGGGCAACTCACAGCCAGCGGCAGCAAGCGGTGCGCTGGTTGCCGGCAACAGTGCCGGACAACACGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCGATATTGCCGCCAGCGCTGAGCAATCAGGGCGAAGAGTTTGCGGCGACTGCGAGTCCATTGCAGCGCATGGCGAGCATCACAAACTCGCTGATCACACAGCCCCCGGTGACGCCGCATCACTCGACACCGCAGCGACCGACGAAAGCGGTGCTGCCACCGATCACCCAGCAGCAATTCGATATGTTCAACAATCTCAACACCGAGGACATTGTGCGACGCGTCAAGGAGGCGCTCAGCCAGTACAGCATCTCGCAGCGTCTGTTCGGTGAATCGGTGCTGGGACTCTCCCAGGGATCCGTCTCCGATCTGCTGGCCCGCCCCAAGCCGTGGCACATGCTGACGCAGAAGGGCCGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATCGCACCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGTCCCCAGATGCCCCAGGGACTGGCGAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGCAGGCCCAGCACATCATGCAACAGATGCAAGCGGCGGCTGCAATGTCCGCGgccatgcaacagcagcaacaagcggCGGCCGCCCAAGCTGCAGCCGTGCAGCAAGCCCAGGCCCAGGcggtgcaacagcagcagcaacagagccagcagcaacagcagcagcagcaacaggttGTTGCCGCCCAGCAACAGGCCCAGGCACAGCTGCTGCACCATCAGAACATGCTGCTCACCTCGCCCGGTCTGCCGCCCCAGCATGCGATCAGCTTACCCGCGGCCAGCACGCCCGGCGGACAGTcgagcggcagcggcagcggtgcCGGCGGCATTGTCACGCCAGTGAGCGGTGGCGAGAAGAAGCCGATGCTGATGCCGGTCCATGGGGGAGCGCACACACCGAATGCGATGCGCAGCTTGCATCAGCACATGTCACCGACGGTGTACGAGATGGCGGCGTTGACGCAGGATCTGGACACACACGACATTACCACAAAGATCAAGGAGGCGCTGCTGGCGAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGACTCTCGCAAGGCTCCGTGTCGGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGACGCGAACCGTTCATTCGCATGCAGCTGTGGCTGAGCGATGCCAACAACGTGGAGCGCCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGCCGCCGCAGCACCGGACCCAATCAGcaggacaacagcagcgacaccTCGAGCAACGACACCAACGACTTCTACACGAGTAGCCCCGGTCCGGGTTCGGTGGGTTCGTCGGTGAGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTCCGTCTGGCCTTCGCCCTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGGACCATTACCAATTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCGGGTCAGGACAATCCGATACCGAGTCGGGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtcTCGTCGAGCTGCACAAGGAGCGCATGGGCCTCAGCGGTGCGCCCATTCCCTACCCACCGTACTTCGCGGCCGCCGCGCTCCTCGGACGCAGCCTAGCCGGCATTCCCGGAGCTGCGGCCGCAGcgggcgctgctgctgcggcagcggcagctgtgGGCGCCGCGGGCGGCGACGAGTTGCAGGCGTTGAATCAGGCGTTCAAGGAACAGATGAGCGGACTGGACCTCTCGATGCCCTCGCTGAAGCGCGAACGCAGCGACGACTATCAGGACGAACTCGAGCTGGATGCCAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCCACGAACCCGAACCGAATGCCGTCTCCGACTACGAGAAGGCGCTGCACAAAACGGCGCTCGCCtcagccgccgctgccgccgcttaCATGAGCAATGCGGCGCGCAGTTCACGCCGCAAGCCGGCGGCACCTCAATGGGTGAATCCAGCTGCCGCAAGCACGCCCAACACACCGGCTGGTGTGGTCGCTGCCGCTGTGgccgctgcggctgcggctgcagctgctgccggcGAGAGCAGCGAGCGGATCATCAACGGAGTGTGCGTGATGCAGGGTTCCGACTACGGTCGGGagaatgacaacgacaacgacaacgacagcatgAAGGGTGCCGGCGATGCGGCTGGCAACGAGTCGGAGCACGAGCAGCACGCTCAGCTGGAGATCGATCAGCGCTTCATGGAGCCCGAGGTGCACATCAAGCAGGaggaggacgacgacgacgaccagcagcagcagcaacaacagcagcatcagcagcagcagcaacagtcggcGGTGGAGGAGAGCGGGAGCGATGCGGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTCCGAGTGCGGCGTCTGAGCAGCAACGGCGAGGCCGAGGAGCATTGCGCCCAGCAGGCGACGGCAGCCACGACgccagcagccacagcagcagcagcagcatcttggAACTATTAA
- Protein Sequence
- MLLSSPPKARDFSEFGCSAWRATLAEKEVNTLKEQLSTSTPGSNSDSNSNSDNNSENNNTAATTAAAAAASTAAAAGLIKTEEEATGDSDKLLNSSIVAAAITLQQQNGSNLLANTNTPSPSPPLLSAEQQQQLQSSLQQNGVGVGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAAQQQQQQQSPMHSPAAAANSNSNSNTTTTQAATALATNTAATAATTATTATLPQPAEATATAAATTATATSAGNDDDEDDDEEEDASMQSNVAHADGEADDDDDDMELEREHIAADSGNVATATAVAVGVEQPSARTENIIDATATTQRNNDDDDDDDEDVDGDNDDDHVAEAENDDDDDDDDEEASLNVSNNHKTNNNNNNTDSCSRKNSEKSQHVALRDNNNVNEQHVAHSVDDDDDCTNNNNTNNNNNNTTTNEKRKKRSNNNNQPAVLLAAKDKEVSKSSLHTSLTSIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNTNNNNNSNSNINNNNNTNSSNNNNHSSQSSEHNNETTSAAAAAAATTTDLTSTHQHDDDDDDDNDHEHNELRDDDEDMEITSNDQQQQQQQQQSSVANNRRHMDDEEDGEEQDTEMSNATATAESNELKIKKEHHSPLDLNVLSPQSALAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAVNANSDEQQRATSNVVATATTVEEEATAAAKATAAAAATSASNKQENETLPDASLQPKLEIIDDDVVAADQGQTLEEQLVNSYWRRGFETTTATAAAAAQATVAGSKTPTIYQNANAVQQQQQQQLLPPPPPPPPLQQQPQQQHYASPQQQQQQQQQPYQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSNRLDAGPLSHPHHQQQPHQQQQQQLPHQLQQQHHLNSSNSSNSSNDPLAHHHQQQQQQQQQQHHHAHGQHHLHHLHHNDSNSSSANSTPNSTTAQLAASIANTLNGNKSLLQAAAAANVAAAAVAVGEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPNFLPSLPSLPAFQFAAAAAAGQDARTHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNAVVAAQQQQQQQQQQEHQRRHDDTHSNEDSKSPPQSCSSPFYKVELKQQLQQQQQQQQQQQQQQQQLHVSAEHAQREQREAAAAAAVVAQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYHELMARTPREATFPSFLLSPFLGGAACMPGAAANPFPTAMATDENMRHAFEREIAKLQQQHQQQQQQAAQAQAQAQAQAQAANFPNFSSLMALQQQVLNGAQDLSLAASKDIKLNGQRVDQHSGGSSSCSKDGERIDDDRSSFPALPPVRKSEGGGGNTPAPSVVPSAVSGGGNSQPAAASGALVAGNSAGQHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAVQQQQQQSQQQQQQQQQVVAAQQQAQAQLLHHQNMLLTSPGLPPQHAISLPAASTPGGQSSGSGSGAGGIVTPVSGGEKKPMLMPVHGGAHTPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPSLKRERSDDYQDELELDASGHNMSDNESIEGGHEPEPNAVSDYEKALHKTALASAAAAAAYMSNAARSSRRKPAAPQWVNPAAASTPNTPAGVVAAAVAAAAAAAAAAGESSERIINGVCVMQGSDYGRENDNDNDNDSMKGAGDAAGNESEHEQHAQLEIDQRFMEPEVHIKQEEDDDDDQQQQQQQQHQQQQQQSAVEESGSDAAEKQLKVINEEKLRMVRVRRLSSNGEAEEHCAQQATAATTPAATAAAAASWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00520420;
- 90% Identity
- iTF_00562370;
- 80% Identity
- iTF_00562370;