Dnik008588.1
Basic Information
- Insect
- Drosophila nikananu
- Gene Symbol
- gata3
- Assembly
- GCA_008042635.1
- Location
- VNJV01010911.1:8620-14531[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 4.7e+03 -2.3 2.3 1 6 385 390 385 405 0.78 2 2 2.3e-17 8e-14 51.4 6.9 1 34 437 469 437 471 0.97
Sequence Information
- Coding Sequence
- ACCAGCCAGGCGGGCGTCAGTGAGCCGGAGGAGCAGTACGTGGTGGTGCCGCGCATCCAGAGGCGCATCCTTACCACAGCAGGAACTCTTGAACTGAACGAGGCGCGGGAAGGAGAGCCAAGTACCAACGCTAGCAACGCCAGCTCGGGATCCGCCCCCGACAGCCACATAGAGTACCAGCGCAGCTCCCACCACTCGCCCGGGGCCACCCACTACGTCCAGATGGCGCCCCGCAACGCAGAGGTGCCGGAGCAGGTGACCACTGCAGCCGGAGCACCTGCAGCCACCTTGTACGCTTACTCCACCGGTCCAATCATCTGCGCCGGAGACGACGTGACGGCCATCAAGATCGAGACGATTGAGAAGGGCGAGGTGACGGGCGagtcgcagcagcaacagcaacagcagcaactgcaacagcagcagcaacaccagcagcaacagcagcagcagtgcccCACGCCCAATGGCGCCAGCTACGGCGACACCTTGGTGATCAACAGTGATGCGGAGGCACTGcagcatcaccaccaccagcagcagcagcagcagcagcagcaccagccaCACCAGCACCAGGCGGCCGCCGTCCACATTGCCAGCAGTTCGCACGGCGGCGCTGTGCGTTTCGTCACGGAGGATGGTCGCTTTGGCACTGCCGGACCGGAGACCTCCACCTCGAGCTTGTACTACGAAGCGCCTGTGGTGGAGGGCAGCGTCCATGCCAACGAGTCCAAGACATACGCGGACCTGGGCAACGCCTACGCCCCCTTCCcgcccagctccagcttcagcagcaacagctacgCGGCCGCCCTGCAGCAGACCAACACCATCTACACAGTGCCCGGAACCGGACAGTTCCTGACCAAGTCCGAGTCCGGACTCAACTCGCTGCGCCAGGCGGGACCTACAACCTTCCAGACGATCTCCTTTCCCGACGGCGGCAACGCCATCGAGACCCTGTGGACGTCGCCAGCCCCGCCGGAGTACCAGAACGTGTCCTTCGGCAACTTCCACCCACAGGTGATCGACGAGTACGCGCCGGGCAACATGCCCACCACCCACTGGTCACCTGCCGGCGGCATCGGACAGTACGATGCCAGCTTGGTCACCGCCTCGGCAACGTCGTCGCCGAATCACGAGCTCAAGTGCGAGAACTGCCACTCGCCGTACATGCGCAAGGGCACTTCCGAGTACTTCTGCCCCAACTGCCCACCCTTCATGCGGATGCCGCCGCGGATGCCGCAACGGCAGGCGAAGCCCAAGGCTGCCGCCGCCCCCAACAACCGGCGCAACGGGGTCACCTGCGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGTCGCAACAACGAGGGCAATCCCGTGTGCAATGCCTGCGGGCTGTACTTCAAGCTCCACAACATGAACCGGCCGCTCTCGATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCGAAGAACAACGGAGGAGCGCCGATGCACCGGGCCCCGCTGCCAAGCATGGCTCAGGGTGTTAATCTGATGGCCAACAGCCCGCTCTACCCGTCACAGGTGCCGGTGAGCATGCTAGGCGTTGACCAGCAGAATGCCAGTCCGGAGCTGCACGACATGTCGGCGACGGGTCCGGCGGGTGGACCCCGAGTGGTGGCCATTCCTCTGAACTCGGCTGCACCGCCCACCTCGGAGGGATCCCTGAACATGTCCGCTCGCCACCACGTGACCGGGGAGAGCCACTCGCCGTACAGCCAGCAGTCGACGCCGCAGAGCCAGTCGCCGCATCTGCCCAGCACGGTGACCATAAATCGCCAGATAGTCCAGCCAGTAACCAGCATCGAGAGCGGGCGCAGTTCCAACAGCGAGCTGACCCCCAGCGTGATCACGCGCACTGGACTGCCGGAGCGATCTTCGAATAACTAA
- Protein Sequence
- TSQAGVSEPEEQYVVVPRIQRRILTTAGTLELNEAREGEPSTNASNASSGSAPDSHIEYQRSSHHSPGATHYVQMAPRNAEVPEQVTTAAGAPAATLYAYSTGPIICAGDDVTAIKIETIEKGEVTGESQQQQQQQQLQQQQQHQQQQQQQCPTPNGASYGDTLVINSDAEALQHHHHQQQQQQQQHQPHQHQAAAVHIASSSHGGAVRFVTEDGRFGTAGPETSTSSLYYEAPVVEGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAAALQQTNTIYTVPGTGQFLTKSESGLNSLRQAGPTTFQTISFPDGGNAIETLWTSPAPPEYQNVSFGNFHPQVIDEYAPGNMPTTHWSPAGGIGQYDASLVTASATSSPNHELKCENCHSPYMRKGTSEYFCPNCPPFMRMPPRMPQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMAQGVNLMANSPLYPSQVPVSMLGVDQQNASPELHDMSATGPAGGPRVVAIPLNSAAPPTSEGSLNMSARHHVTGESHSPYSQQSTPQSQSPHLPSTVTINRQIVQPVTSIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00578942;
- 90% Identity
- iTF_00594908;
- 80% Identity
- -