Dnik012061.1
Basic Information
- Insect
- Drosophila nikananu
- Gene Symbol
- pnr
- Assembly
- GCA_008042635.1
- Location
- VNJV01004890.1:2308-3916[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 1.5e-14 53.7 3.2 1 34 102 134 102 136 0.97 2 2 3.7e-19 1.3e-15 57.1 6.7 1 35 159 192 159 193 0.98
Sequence Information
- Coding Sequence
- ATGTACCACAGCAGTGCCGTAGCGGCGTACACGGATCTCGCCGCCGCCGGGAGTGCGGCCAGCGCTGGAGTCGGAGTTGTCCGGCTACCACCACCAGCAGGCCCCCACTTTGggggcgcagcagcagcaccgaaCGCCTGGACGACGGACACCTTTGGATCGGCGCACGCCCAGTTGCCGGCGCAGTTCTACACACAGAACGTGATGATGGGCACCTGGCGGAGCGCCTATGACCCCACGGGTTTCCAACGCTCCTCGCCGTACGAGAGCGCCATGGACTTCCAGTTCGGCGAGGGACGTGAGTGCGTCAACTGCGGCGCCATCTCCACGCCCCTGTGGCGTCGGGATGGCACTGGCCACTACCTGTGCAACGCCTGCGGACTGTACCACAAGATGAACGGGATGAACCGGCCGCTGATCAAGCCCAGCAAGCGCCTGGTGAGTGCAACTGCCACTAGGAGGCTGGGCCTGTGTTGCACCAACTGCGGCACCCGCACCACCACCCTCTGGAGACGGAACAACGACGGCGAGCCGGTGTGCAATGCCTGCGGGCTCTACTACAAGCTGCACGGGGTCAACAGGCCACTGGCCATGCGCAAGGATGGCATCCAGACGCGGAAGCGGAAGCCCAAGAAGACGGGCAGCGGCTCGGCGTCAGGAGCTGGAACGGGCTCGGGCTCAAGCTCCGCCCTGGAGACCATCAAGGAGTGCAAGGAAGAGCACGATCTCAAACCGTCGCTTAGTTTGGAGCGCCACAGCCTTGGCAAGCTACACACGGATCTAAAGGTCAGCTCCGGCGCCTCCACCCTGCTTGGTCAGCACCAcgcccaacagcagcaggcggcgcaccagcagcagcaacaacaggcggtacaccagcagcagcagcaggcgggaGGGCACCAGCAGTGCTTTTCCCACTACGGACAGGCTGCGACAcagcagcaggcccagcaccagcaacacGGACACGGCATGACCCCGTCCTCGAGCCAGTCGCAGCTGAGTTCCCGGCCGCTCCACGGAGCGACAGGGGCGCAGCTCTACACGCCAGGCAGCAGCTCTGGAGGAGGCAGTGCATCGGCTTACACCTCGCATAGTGCCGAGACGCCGGCTTTGAGCAATGGCACTCCCTCGCCGCACTACCAGCACCACCATCACCTGGGCGGATCCCACGGACATCACGTAACGGCGGCGGCTCATCATCATCTgcatgccgccgccgcagcagccgcctACGGGGTGAAGACGGAGGCGAGTGCCACCAACTATGACTACGTGAACAACTGCTACTTTGGCGGATCCTTTGGGGCACTGGGTGGAGCAGCGTCCTCGGCCGCCATGGCGGGCGGAGCGGCCACCGAGTTGGCCGGCTATCATCATCAGCACAACGTCATCCAGGCGGCAAAGCTGATGGCCACCTCGTAA
- Protein Sequence
- MYHSSAVAAYTDLAAAGSAASAGVGVVRLPPPAGPHFGGAAAAPNAWTTDTFGSAHAQLPAQFYTQNVMMGTWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSASGAGTGSGSSSALETIKECKEEHDLKPSLSLERHSLGKLHTDLKVSSGASTLLGQHHAQQQQAAHQQQQQQAVHQQQQQAGGHQQCFSHYGQAATQQQAQHQQHGHGMTPSSSQSQLSSRPLHGATGAQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHYQHHHHLGGSHGHHVTAAAHHHLHAAAAAAAYGVKTEASATNYDYVNNCYFGGSFGALGGAASSAAMAGGAATELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597017;
- 90% Identity
- iTF_00613167;
- 80% Identity
- -