Dnik004855.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nikananu
Gene Symbol
ct
Assembly
GCA_008042635.1
Location
VNJV01014517.1:155735-193490[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6e-27 8e-23 80.7 0.0 3 72 950 1020 948 1025 0.95
2 3 6.6e-32 7.9e-28 96.7 0.0 3 77 1435 1510 1433 1512 0.96
3 3 4.2e-31 5.1e-27 94.1 0.0 3 76 1727 1801 1725 1804 0.96

Sequence Information

Coding Sequence
ATGCCGCCGCGCATGCTGCAACCTCAGGAGGGGCAAGCAGCACACatgggcggcggcagcggtggcggtggtgccGAAAGGGGGCAGAGCATGGCGGCGACGACGAGTGAGTTGACATGTGCCAAGCACACGACAATTCtggacgaggatgaggaggaggaggacgatgaGCCAGAGCAGGCGTCACACCAACCACAGAAGCAAGAGACAGAGCAGGACgacgatgaggatgaggatgatgaggaCGAGTATGCCTCGATGCAATCGAACCCAGACGATATGGAGACCGAGACCGAGACCAGAACTGAGCCAAGTGCCACAACGCAGGCGTTGGAACTTTTAGAGGTCAGCATCAAGGAGGAGGCTAGTTTAAAtgtgacaacaacaacaaccacatccacaacaacagcaacaacaacaacaaccagcgAGAATAGCAATAATAGTTGTAGTCGAAAGAACAATGAAAGTAACACCAACAATGAGCAACAAGTTGCTGTTGTGGCTGCCAATAGTGCCGAGGACGATGATtgcgccaacaacaacaataccaataccaccaccaccaccaccaccagcaataccaacaacaacaataatacaaatacaacaacaaccagcaaCACAGCCACCAGCAATACCAATaccaataataacaacaacagtaataccaataacaacaataccaacaacaccaacaacaacaacaacagcagcagtggcaacaGCGAGAAGCGCAAGAAGaagaacaataacaacaacaacggccaGCCAGCTGTTCTATTAGCTGCCAAAGATAAAGAGATTAAAGCACTTATGGAGGAGCTGCAACGCCTGCAGGCCCTGGAGCAAACGCACCTGGTGCAGATCCAGCGCCTGGAGGAGCACCTGGAGGTGAAGCGGCAGCACATCATACGCCTGGAGGCCCGCCTGGACAAGCATCAGATCAACGAAGCCCTGGCGGAGGCCACCGCCCTGGCAGCCGTTACCGCtgccgccgttgccgctgccaataataataataacaacaacaataatagtCAGAGCAGCGACCACAATAAGCTaagtgccgccgccgccaccaaggccgccgccgcctcagcCACCTCCAGTGATCCCgcggagagcagcagcaagacCACCGCCCAGGCGATGgacgacgatgaggaggaggaggaagaggaggacgaGGCCATGCTGGTGGATGCCAGCGAAGAGGTCAAAGCGCAGGAGAAGGTGAAGACGGAAGAGCGACAGCGGCGAATggacgatgaggaggaggatgaggaggacgaggatgatCAGATCGGCGAGAATCGGGCCGCAGATCGGAGAATCGTCAGCGATAGCAATGAGATCAAAATCGAAAAGGCACAGCAcaGTCCTTTGGACCTTAATGTGCTCAGCCCGCAGTCGGCCatcgccgctgctgcagccgccgccgctgccgccgcctgtgCCAATGACCCCAACAAATTCCAGGAGCTGCTCATAGAGCGGACCAAGGCCCTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGATGCCGTCAATGCCATTAGCGAAGAGAACAACCCCCAGAAATCGGATGTTATAGCTGAAGTTATCGATGAACCTATCGAAGCCTTAAGCAGCTCAAAAATGCCGCCCAAAATGGAGCTacccgatgatgatgatgatgatgatgaagatgataATGAACCGGCAACGGAAACGGAAAGGGCaaacgaaaccgaaatcgAAGCCGTTAAGGACGTATTGCTGCAGGAGAAGCTGGTCAATAGCTATTGGCGTCGCGGCTTCGATACATCGCCTCCGGGGAGCAAAACGCCAACAATTTATCAGGGCCTTAGGCCCGCCGATCCTCAGCAGCAAATGCTgttgccgccaccaccgcctccaccgccaccgccaacCATGGCCCCAACCAACTCTCTACCGCCCAACCatcaccaacaacaacagcaacatctcTTTAGTAATCCacttcaacaacaacaccaacaacaacaacaccaacagcagctACAGCAACCGCAACATGGACCCTCGTCCACCGCCTTGCTTAGCCAATTGGTTAACTCCACTTTTTCCAACTCCAACTCAACCACAACCTCCTCTTCCTCCACCTTATCCTCCTCTCGCACAGATGCCCACCAACACCAGAGGGAGCGTGAACGTgagcgggaacgggaacgtGAACGTGAGCATCACCtgcacagcaacagcagcagcgggaacAGCAGCTCCTCgaatcaccaccaccaccatccaCATTctcaccagcaacagcagcagcatcaacatcaGCCGGATGGACTGAATCACCATCATGGCCTCAATCATCATCTGCATGCCAGCCTGCTTCATCCATCGGCGGCAGCCCATCATCACCTGCACCAGCATCAAGAGTCCAGCTCGAACTCCAGTGCCACCAGCACACCCACCgccggagctggaggagcCACTGGATCAGCCGGAGCaggtgccgccgccgccgccgccgctgccctgAATGGCATCAAAAACGAGGAAGCCACCACCAATGGcctggctgccgctgccatgGCCGCCCATGCCCAGCATGCGGCAGCCGCTGCTGTGATGGGTCCTGGCTTCTTACCTGGCCTACCGTCTGCCTTTCAATTCGCTGCCGCCGCCCAGGTGGCCGCCGGTGGCGGTGATGTTGTAGGTCGCGGACATTATAGGTTCGCGGATGCGGAACTGCAATTACCGCCGGGTGCCTCAATGGCCGGCCGTTTGGGTGAGTCCCTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTATAATATGGACAAATATGCCAATCAGGCACTGGATACCCTGCACATCTCGAGGCGCGTACGAGAGCTGCTGTCGGTTCATAACATCGGGCAGCGATTGTTTGCAAAATATATCCTGGGACTGTCCCAAGGCACCGTCTCGGAGTTACTCAGCAAGCCGAAGCCGTGGGACAAGCTGACGGAGAAGGGCCGGGATAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTGATGCTGCTCAAGTCGCTGATACCCAAGAAAGACTCTGGCCTGCCACAGTACGCTGGTCGCGGTGCCGGCGGCACTGGCGGTGATGATTCCATGTCCGAGGATCGCATCGCCCACATCCTCAGCGAGGCCTCTTCCCTGATGAAGCAGAGCAGCgttgtccagcagcagcagcagctggattTGAAGCATGAGATGCGTCGTCATGGTGCTGCCGGCCTTGTTGGCGATGATTCCCACAGCAATGAGGATAGCAAATCGCCGCCCCAAAGCTGCAGTTCGCCGTTCTTTAAGGTGGATCAGCAGctgaagcaggagcagcagcggcatcagcagcagcagcagcatctcaatccggagcagcagcaacgggaACGGGAGCGTGAGCAGCGCGAGcgggagcaacagcagcgttTTAAGCACGAGGATCTGGCCCAGGACAAGATGGCGAGGCTGTACCAGGAGCTCATAGCACGCACCCCGCGTGAGGCACCATTTCCCAGCCTGTTCTTCTCACCCATTTTCGGAGGAGGTGCCGGCATGCCCGGCGCCGCTGGCAACGCCTTTCCCGCCATGGCCGATGAGAATATGCGACACGTGTTCGAGCGGGAAATCGtcaagctgcagcagcatcagcagcagcaacagcagcagcagcaacagcagcaacagcagcagtttcCCAACTTCTCCAGCCTCATggccctgcagcagcaggtgctcAACGGTGCCCAGGATCTCTCGCTGgccgcagcggcggcagctgccaaGGACATCAAGCTGAATGGCGTTCAGCGTTCATCGCTGGACCACAGCACCgtcggcggtggtggcggcggtggcggcagcagcagcagttgctcCAAGGATGGCGAGCGCGATGAGCCCAAGTATGCAGCCTCGCTGCATGGCCTCAAGTCCGAGGGTGGCGGCACACCGACACCTGGCCAGGCGCCCGCCTCAATGCCCTCTGCCGCCTCGGCAGTGGCAGGAGGTGGAGTGGGAGCCGGGGCCACCAGCGGCAATTCGGCGGCACCCAGTCCGTTGAGTAACTCCATTCTGCCGCCAGCACTGAGCAGCCAGAGCGAGGAGTTTGCCGCCACGGCCAGTCCCCTGCAGCGGATGGCATCCATAACGAATTCGCTGATCACCCAGCCGCCGGTGACGCCGCATCACAGCACACCGCAGCGTCCGACCAAGGCGGTCCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGATATTGTGCGGCGGGTGAAGGAGGCCCTCTCCCAGTACTCGATCTCCCAGCGACTCTTTGGCGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGATCTGCTGGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCAGGGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAATGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCCCCCGAGAAGCTGATGCGAACGGGCAGCTACAGCGGCAGTCCACAGATGCCGCAGGGTTTGGCCAGCAAAATGCAGGCCTCGCTGCCCATGCAGAAGATGATGAGCGAACTGAAGCTGCAGGAGCCGGCGCAGGCGCAGCATCTTATGCAGCAAATGCAGGCGGCGGCCATGGCCCAGGCTCAggcccaacagcagcagcaggttcaGGTGCAGCAGGCTGCCCAGCAGCatttgcagcagcaggcccagcagcaTCTTCAGGCGGCGGCCCAGCAGCATctccagcagcatcagcagcagcagcaacagcagcagcagcaggcggctcagcagcagcagcagcaacatccacACCAGCAACACCatcaggcagcggcagcggcggcagcggcagcggctcTGCATCATCAGAGCATGCTGTTGACCTCGCCGGGTCTGCCGCCGCAGCATGCCATTAGCCTGCCACCGGGCGGCAATCCTGGCCAGAATCAGGGCAACTCGCAGAGTGGCCAGAATGCCACGGTTGGCGATAAGAAACCAATGCTGATGCCAGTCCATGGCACCAATGCAATGCGCAGCCTGCACCAGCACATGTCGCCCACCGTCTACGAGATGGCCGCCCTGACCCAGGACCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCCCTGCTGGCCAATAACATTGGCCAGAAAATCTTTGGTGAGGCCGTGCTGGGCCTCTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCAGGGAGCCCTTCATCCGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGATCAAGAATGAGCGGCGCGAGGCGAGCAAGCGTCGCAGGAGCACCGGACCCAATCAGCAGGACAATAGCAGTGATACATCCAGCAATGATACCAATGACTTTTACACCAGCAGCCCGGGCCCGGGATCCGTGGGCTCGGGAGTGGGCGGCGTGGGCGGTGCACCGCCGAGCAAAAAGCAAAGGGTGCTCTTTTCCGAAGAGCAAAAGGAGGCCCTGCGTTTGGCCTTTGCCCTGGATCCCTATCCGAATGTCGGTACCATTGAGTTTCTGGCCAACGAGCTCAGTCTGGCCACGAGAACGATCACGAATTGGTTCCACAACCACCGCATGCGATTGAAGCAACAGGTGCCGCACGGCCAGCCGGGTCAGGACAACCCGATACCCAGCCGGGAGAGCACCAGTGCCACGCCCTTCGATCCCGTCCAGTTCCGCATTCTCCTGCAGCAGCGTCTCGTGGAGCTGCACAAGGAGCGCATGGGCCTGAGTGGGGCACCCACTATCCCCTACCCACCCTACTTTGCGGCAGCTGCCCTGCTGGGACGCAGCCTGGCTGGCATTCCGGgggcagccgcagcagcgggagcagcagcagcagctgcagcagctgtgggcgccggcggcggtggtgccACCACCAGCGAAGAGCTGCAGGCCCTGAATCAGGCCTTCAAGGAGCAAATGAGCGGCCTGGATCTGTCCATGCCCACGCTAAAGCGTGAGCGTAGCGAAGACTACCAGGATGACATGGAGCTGGaccatcatcagcagcagcagcatcatcatcatctccagctgcagcagcacctgcagcagcagcaacaccagctgcagcagcagcaactcagCGACAACGAGTCCGAACAGGATCAGCTGGACGACAACAAGAGCAGCGTTTACAAGTCCGCCTTGGCCTCGGCTGCAGCGGCCGCTGCCTACATGTCCAATGCAGTGAGAAGCAATCGCCGCAAGCCCGCTGCCCCCCAATGGGTGAATCCAGCcggtgccacgcccacgcccaatGCTGTCCttgcggcagctgcagcagcagccgcagccgcagcagcagcggcagcagcagccacggcGGCGGAGAGCGAGAGGATCATCAATGGCGTGTGCGTGATGCAGGGCTCGTCGGAGTATGGCAGAGATGAGAGCGAGCAGGCTGGCGGCAAGGAGTCGTCGGCTGGCGGGGACTCGGATCATGATGAGCATGAGCATGCCCAGCTGGAGATTGATCAGAGCTTCATGGAGCCGGAGGTGCACAtcaagcaggaggaggagcagctcgacgaggaggaggacgaggagcagcagcagcagcagtcaagTCTGGAGGGTGCCAACGATgaggcacagcagcagcagcagcagctgaaggtgGTCAACGAGGAGAAGCTGCGGCTGGTGCGTGTGCGTCGATTGAGCAGCACGGGCAATGGTTCCGCCGATGAGATGCCCGCACCCACGGCTCCCCTAGCGGCCTCCACTCCAGCTGGAGAGGCTgcctccaccagcagcagcagcagcaacaacacagcCAGCACGAGCAGCAGTCCCCTGGCCCCGCCAGCAGTGACCGCCAGTTCGAGTCCTGCAGGATGGAATTACTAA
Protein Sequence
MPPRMLQPQEGQAAHMGGGSGGGGAERGQSMAATTSELTCAKHTTILDEDEEEEDDEPEQASHQPQKQETEQDDDEDEDDEDEYASMQSNPDDMETETETRTEPSATTQALELLEVSIKEEASLNVTTTTTTSTTTATTTTTSENSNNSCSRKNNESNTNNEQQVAVVAANSAEDDDCANNNNTNTTTTTTTSNTNNNNNTNTTTTSNTATSNTNTNNNNNSNTNNNNTNNTNNNNNSSSGNSEKRKKKNNNNNNGQPAVLLAAKDKEIKALMEELQRLQALEQTHLVQIQRLEEHLEVKRQHIIRLEARLDKHQINEALAEATALAAVTAAAVAAANNNNNNNNNSQSSDHNKLSAAAATKAAAASATSSDPAESSSKTTAQAMDDDEEEEEEEDEAMLVDASEEVKAQEKVKTEERQRRMDDEEEDEEDEDDQIGENRAADRRIVSDSNEIKIEKAQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQELLIERTKALAAEALKNGASDAVNAISEENNPQKSDVIAEVIDEPIEALSSSKMPPKMELPDDDDDDDEDDNEPATETERANETEIEAVKDVLLQEKLVNSYWRRGFDTSPPGSKTPTIYQGLRPADPQQQMLLPPPPPPPPPPTMAPTNSLPPNHHQQQQQHLFSNPLQQQHQQQQHQQQLQQPQHGPSSTALLSQLVNSTFSNSNSTTTSSSSTLSSSRTDAHQHQREREREREREREREHHLHSNSSSGNSSSSNHHHHHPHSHQQQQQHQHQPDGLNHHHGLNHHLHASLLHPSAAAHHHLHQHQESSSNSSATSTPTAGAGGATGSAGAGAAAAAAAALNGIKNEEATTNGLAAAAMAAHAQHAAAAAVMGPGFLPGLPSAFQFAAAAQVAAGGGDVVGRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGTGGDDSMSEDRIAHILSEASSLMKQSSVVQQQQQLDLKHEMRRHGAAGLVGDDSHSNEDSKSPPQSCSSPFFKVDQQLKQEQQRHQQQQQHLNPEQQQREREREQREREQQQRFKHEDLAQDKMARLYQELIARTPREAPFPSLFFSPIFGGGAGMPGAAGNAFPAMADENMRHVFEREIVKLQQHQQQQQQQQQQQQQQQFPNFSSLMALQQQVLNGAQDLSLAAAAAAAKDIKLNGVQRSSLDHSTVGGGGGGGGSSSSCSKDGERDEPKYAASLHGLKSEGGGTPTPGQAPASMPSAASAVAGGGVGAGATSGNSAAPSPLSNSILPPALSSQSEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQASLPMQKMMSELKLQEPAQAQHLMQQMQAAAMAQAQAQQQQQVQVQQAAQQHLQQQAQQHLQAAAQQHLQQHQQQQQQQQQQAAQQQQQQHPHQQHHQAAAAAAAAAALHHQSMLLTSPGLPPQHAISLPPGGNPGQNQGNSQSGQNATVGDKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPTIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAGGGGATTSEELQALNQAFKEQMSGLDLSMPTLKRERSEDYQDDMELDHHQQQQHHHHLQLQQHLQQQQHQLQQQQLSDNESEQDQLDDNKSSVYKSALASAAAAAAYMSNAVRSNRRKPAAPQWVNPAGATPTPNAVLAAAAAAAAAAAAAAAAATAAESERIINGVCVMQGSSEYGRDESEQAGGKESSAGGDSDHDEHEHAQLEIDQSFMEPEVHIKQEEEQLDEEEDEEQQQQQSSLEGANDEAQQQQQQLKVVNEEKLRLVRVRRLSSTGNGSADEMPAPTAPLAASTPAGEAASTSSSSSNNTASTSSSPLAPPAVTASSSPAGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489278;
90% Identity
iTF_00561655;
80% Identity
iTF_00561655;