Dnik023247.1
Basic Information
- Insect
- Drosophila nikananu
- Gene Symbol
- osa
- Assembly
- GCA_008042635.1
- Location
- VNJV01005105.1:1-5867[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 1.3e+04 -2.9 0.0 28 46 295 313 274 314 0.75 2 2 1e-14 3.1e-11 43.9 0.0 3 51 541 589 539 590 0.94
Sequence Information
- Coding Sequence
- GAGCTAATTGGACAGAATAGCAACGACAGCTCCAGCGGCGGGGCGCACAGTGGTATGGGCTCTGGTCCGCCCGGCACACCGAATCCCCAACAGGTGATGCGGCCCACACCCTCGCCCACCGGCTCCTCTGGTTCACGTTCCATGTCCCCGGCAGTGGCCCAAAACCATCCAATCTCGCGTCCGGCGAGCAACCAGTCAAGCAGCGGCGTACCCATGCAACAGCCACCAGTAGGGGCGGTGGGTGGACCACCACCGATGCCCCAACATCCCGGCATGCCAGGCGGTccgccccagcagcagcagcaatctcagcagcaacaacaggctTCGAATTCGGCCTCGTCGGCAAGCAATTCGCCGCAACAGACGCCGCCGCCGGGACCGCCGCCACCCAATCAACAGGGCATCAATAACATGGCAACGCCACCCCCGCAGGGAGCGGCAGGAGGAGGCTACCCAATGCCACCGCACATGCATGGCGGCTACAAGATGGGCGGACCGGGTCAGAGTCCCGGTGGCCAGAGCTAtccgccgcagcagccacagcaatATCCACCAGGTAACTACCCGCCACGTCCACAATATCCGCCTGGCGCCTACGCCACGGGACCACCACCGCCCCCAACAAGCCAACAAGCAGGAGCGGGTGGAGCCAACAGTATGCCCTCCGTCGCTCAGGCTGGCGGGTATCCCGGTCGAGGCATGCCCAACCACAGTGGCCAATATCCGCCGTATCAGTGGGTTCCGCCCTCGCCGCAGCAAGCCGTGCCCGGCGGAGGTGCTCCCGGTGGTGGTGCAATGGTCGGAAATCATGTCCAGGGCAAAGGCACACCGCCACCGCCGTCAGTTGTGGGTGGTCAGCCACCCCCGTCTCAGGGAAGCGGATCGCCCCGCCCTCTTACCTATCTGAAGCAGCATTTACAGCACAAGGGCGGCTACGGAGGAAGTCAAACGCCACCACAGGGCCCACAAGGCTACGGCAACGGGCCGACCGGAATGCATCCGGGCATGCCGATGGGTCCACCCCATCACATGGGACCGCCACACGGACCCACTAGCATGGGTCCGCCCACAACTACGCCACCTCAGGCGCAGATTCTCCAGGGCGGCCAGCCTCCGGGACAGGGACAAGGTGCTGGACCGGAAAGTGGTGGTGGCCCGGAGCATATTTCGCAGGATAACGGCATAAGTTCGTCGGGGCCGACGGGTGGTGCGGCGGGAATGCATGCGGTTACCGCAGTGGTCACCACTGGGCCGGATGGCACGCCCATGGACGAAGTCAGTCAGCAGAGTACATTATCGAATGCTTCGGCGGCATCCGGCGAAGATCCACAATGCACCACACCAAAGTCGCGCAAAAATGATCCCTATGGCCAAAGTCACCTAGCTCCGCCTAGCACATCTCCGCATCCGGTTGTGATGCAtccaggcggcggcggtggaccCGGTGAGGAGTACGACATGAGTTCACCGCCCAATTGGCCGCGTCCGACTGGTAGCCCTCAGGTGTTTAACCATGTTCCCCAGGTGCCCCAAGAGCCCTTTCGCAGCACCATCACCACGACGAAGAAATCTGACTCGCTGTGCAAGCTATACGAAATGGATGACAATCCGGATAGGCGTGGCTGGCTTGACAAGCTGCGGTCGTTCATGGAGGAGCGGCGAACCCCGATTACCGCCTGCCCAACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTATGCAAGGTGCCGTAG
- Protein Sequence
- ELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGVPMQQPPVGAVGGPPPMPQHPGMPGGPPQQQQQSQQQQQASNSASSASNSPQQTPPPGPPPPNQQGINNMATPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGGQSYPPQQPQQYPPGNYPPRPQYPPGAYATGPPPPPTSQQAGAGGANSMPSVAQAGGYPGRGMPNHSGQYPPYQWVPPSPQQAVPGGGAPGGGAMVGNHVQGKGTPPPPSVVGGQPPPSQGSGSPRPLTYLKQHLQHKGGYGGSQTPPQGPQGYGNGPTGMHPGMPMGPPHHMGPPHGPTSMGPPTTTPPQAQILQGGQPPGQGQGAGPESGGGPEHISQDNGISSSGPTGGAAGMHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYGQSHLAPPSTSPHPVVMHPGGGGGPGEEYDMSSPPNWPRPTGSPQVFNHVPQVPQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00569485;
- 90% Identity
- iTF_00569485;
- 80% Identity
- -