Dnig025036.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- ct
- Assembly
- GCA_004149445.1
- Location
- SCDR01001450.1:12582-46924[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-27 7.2e-23 80.9 0.0 3 72 644 714 642 719 0.95 2 3 5.4e-32 7.1e-28 97.0 0.0 3 77 1126 1201 1124 1203 0.96 3 3 3.3e-31 4.4e-27 94.5 0.0 3 76 1406 1480 1404 1483 0.96
Sequence Information
- Coding Sequence
- atggagctggagccggagcATGTTGCTGATACGGGTAGTGTTGCTGTCGCTGAGCCATTGGCAAGAACTGATAAAATTGGCGATTCGAGTGCGAATGCAACGCACGTTGACGATGATCACGATGGCGATCGAGATGGAGATGATGAGGATATTggccatgttgctgctggcgagCATGAGGATGATGAGGAAGCTAGTTTAAATGTTAGCaataatcacaacaacaacaatactgaTAGCAACAATAGCTGTAGtcgaaagaacaacaacaacaacaacagtgaaaCGCAACATGTTGCACTGCGTGATAATAATGTTAATGAGCAGCATGTGGCACATAGCGCCGAGGACGAGGATTGCACCAATAACAACACTaacaccaataacaacaataacaacaacaacaataatgagaAGCGCAAAAAGCgcaacgccagcaacaacaacaataacaacaacaacaacaatcaacccGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCTCTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAGGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCGCGTTTGGATAAGCAACAGATCAATGAGGCCCTCGCCGAGGCTACTGCATTGGCGGCCGCTGTAAATGCAGCTGcgacaaacaataacaacaatagcaacagcaacaataataacagcagcaaaaataacaacaacaatcacagtAGCCAGAGTAGCGACAATAACAACGTGTTCAAAACAACAGATCTAACATCGACCCATCAGCAtaatgacgatgatgacgatgacgatgacaatGATCGTGATAATGAGATGCGCgatggcgacgacgacgaggataCGGATTTGGCCAACGATGAGCAGCAACACGCTGCTATGGCCAACAATCGGCACGACGATGTCAACGATAAGGAAGATGCCGAGGAGCAGGATGCCGAAATGTCCAATGCCACAGCCACCGCGGACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGTCCACAGTCGGCTATTGCCACAGCCGCggcggccgcagcagccgctgcctgCGCCAACGATCCAAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCCTTGGCCGCTGAGGCGCTCAAGAATGGCGCCAGCGATGCGATCAATGCAGCCAGCGAAGATGCCGCCTCACACCACcaactccagcagcagcagcaacagccacagctgcatcagcagcagcagcagcagcagcaacatctccacaacagcagcaatagcaacagcagcagcgcagccgGCAGCGATCCACtgaatcatcatcatcatgggCACCACCACAGCCATCCGCATGGCCAGATATTGCATACGGCGCACCATCTGCACCATGGCGCCGACTCGAATTCATCCAGCGCCAACAGCACGCCCAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAACAAGTCGCTGTTGCAGGCAGCGGCCGCTGCCAAtgtggctgccgctgtcgttgccgaggacaacaacaacagtctgACGCCAAATACGAATGCGGCCGTTGCCGCAGCGGCAATGGCGGCACATGCCCAGCATGCCGCCGCACTGGGCGCGCCCAATTTTCTGCCCAATCTGCCCAGCCTGCCGGCGTTCCAGTTTGCGGCCGCAGCGGCCGCTGGACAGGATGCCCGGGCGCATTTTCGCTTTGCGGACGCcgagctgcaactgcagccggGCGTCTCGATGGCCGGTCGACTGGGCGAATCGCTCATACCCAAAGGGGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTCGACACACTTCACATCTCGCGACGCGTCCGCGAGCTGCTCTCCGTGCACAACATCGGGCAGCGTCTGTTTGCCAAATACATTTTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGTTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCACGCCTGGGCCTGTGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCCGGACTGCCACAGTATGCTGGtcgcggcgctggcggcgatgATTCCATGTCCGAAGATCGCCTTGCACACATACTCAGCGAGGCCTCCTCCCTGCTGAAGAACAACGCcgccgcacagcagcagcagcagcagcaacaggagcatcAGCGTCGCCATGCCAGCGACGATACGCACAGCAACGAGGACAGCAAGTCGCCGCCGCAGAGCTGCAGTTCGCCGTTCTACAAGGTGGAGCAGCAGATcaagcagcaccagcagcagcaccaacagcagctgcatgtCTCCGAGCATGCGCAGCGCGAGCAGCGCGAagcggccgctgccgccgccgccgttgccgttcaccagcagcagcagcagcgcgaacAGCGCGAGGCCGCCcagcgggagcagcagcagcgattgcGCCACGAGGATCTGGCACAGGACAAAATGGCGCGTCTCTATCAGGAGCTAATGGCTCGCACTCCGCGCGAACCAACCTTCCAAAGCTTTTTACTGTCGCCGTTCTTTAGCGGAGCCGCCGGCATGCCTGGAGCAGCCGCCAATCCATTCCCCCCGCTGGCCGATGAGAATATGCGTCATGCGTTCGAGCGCGAGATTGccaagctgcaacagcagcagcagcagcagcagcaggcgcaggccGCCAGTTTTCCCAACTTTTCCAGTTTgatggcgctgcagcagcaggtgctgaACGGTGCGCAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTGAACGGCCAGCGATCGTCGCTCGATCagcacagcggcagcagcagctccaaggATGGCGAACGCGGCGACGATGGCGAACGCAGCTTCCCAGCACTGCCGCATGCCCGCAAATCGGAGGGCGGCAACACGCCGGCACCGcccgcaccaccagcaccgccCGCTACGgcaagcggcggcggcagcagcggcgcaaaTGCAGCGAACACAGCCGTCGCCAGCGGCCACGGCAGCAACTCGGCGGCGCCCAGTCCGCTGAGCAACTCGATACTGCCGCCGGCACTGAGCAGCCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCGCTGCAGCGGATGGCGTCCATAACCAATTCGCTGATCACACAGCCGCCAGTAACGCCGCACCACTCGCAGCCGCAGCGACCCACCAAAGCGGTGCTGCCGCCAATAACACAGCAGCAATTCGACATGTTCAACAATCTGAACACGGAGGACATTGTGCGACGGGTGAAGGAGGCGCTCTCGCAGTACAGCATCTCGCAGCGACTGTTTGGCGAGTCGGTGCTGGGCTTGTCGCAGGGATCGGTGTCGGATCTGTTGGCCAGACCGAAGCCGTGGCACATGCTCACCCAGAAGGGACGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATAGCGCCCGAGAAGCTGATGCGCACCGGCAGCTACAGCGGCAGTCCACAGATGCCGCAGGGCTTGGCCAACAAGATGCAGGCGACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCCGCCCAGGCGCAGCACATCATGCAGCAGATGCAGGCGGCGGCCGCAATGTCAGCGgccatgcagcagcaacagcaagcgGCGGCCGCACAGGCCGCTGCCGTTCAGCAGgcccaggcgcaggcgcagcagagccagcagcagcagcaccagcagcagcatcagcagcaggcgcagcagcaggcggcggcggcggcgcaacaggcgcagcagcaggcgcagctgctgcatcatCAGAATATGCTGCTGACGTCGCCGGGTCTGCCGCCGCAGCATGCGATCAGTTTGCCGGCGGCGAGCACGCCCAGCGGCCAGGCCGGCGGCAACCCGGCCGTGACCGGTACGCCCGGCAGCGGCGAGAAGAAGCCAATGATGATGCCGGTGCATGGCGGGGCGCATGCGCCGAACGCGATGCGCAGCCTGCATCAGCATATGTCGCCGACCGTTTATGAGATGGCCGCGCTGACGCAGGATCTGGACACGCACGATATAACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGCCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAACCGTGGCACATGCTATCGATCAAGGGACGGGAGCCGTTCATCCGGATGCAGCTGTGGCTGAGCGATGCCAACAACGTGGagcgactgcagctgctgaaaaaCGAGCGACGGGAGGCGAGCAAGCGCCGTCGCAGCACCGGCCCCAATCAGcaggacaacagcagcgataCGTCGAGCAACGATACCAACGATTTCTATACGAGCAGCCCCGGACCCGGTTCGGTGGGCTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGAGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTACGCTTGGCCTTCGCCCTCGATCCGTATCCGAATGTCGGCACCATCGAGTTCCTCGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCCCACGGCCAGCCCGGCCAGGATAATCCGATACCCAGCCGGGAGAACACCAATGCGACGCCCTTCGATCCCGTCCAGTTTCGCatactgctgcagcagcggctcgTCGAGCTGCACAAGGAACGGATGGGTCTGAGTGGTGCGCCGATACCCTACCCACCGTACtttgccaccgccgccgctgccctgCTCGGACGCAGCCTGGCGGGCATACCGGGCGCCGCGGCAGCGGCTGgggccgctgcggctgccgccgTTGCGGTTGGTGCCGCTGGCGGCGATGAGCTGCAGGCGCTGAATCAGGCGTTCAAGGAGCAGATGAGCGGACTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGAtgagctggagctggacgCCAGCGGTCACAATATGAGCGACAACGAGTCTATCGAGGGCGGCCACGAGCCGGAGGCCACGCCCATTTCCGACTACGAGAAGGCGCTCCAAAAATCGGCGCTCGCctccgccgctgccgctgccgcctaCTTGAGCAATGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCGCAATGGGTCAATCCGGCGGGCGCTGGCACGCCCACAGCGGCTGGTGCTGCCAATGTTGGCgtcgctggcgtcgctgccggcgacggcagcagcgAGCGGATCATCAACGGCGTCTGCGTAATGCAGGCCTCCGACTACGGTCGCGATGAGGGCGACAGCGTCAAAGGCGGCGACTCCAATGCCGATGCCGAGCACGATGATCATGCGCAGCTGGAGATCGATCAGCGCTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAGgaggacgacgatgacgaacagccgccccagcagcagcagcaacagcaatcggAGGAGGATGCCGCCCGGCTCGCCGCCGATGCGGACAAACAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTGCGGCGACTGAGCAGCAACGGCGATGCCGAGGAGCACTGCGCCGCGGCGCAGCAGgcgacagcggcggcagcagcagcagctgcggcagcggcagcggcagcagcagtggcgcCGGCAGCAGCCGCGTGGAACTACTAA
- Protein Sequence
- MELEPEHVADTGSVAVAEPLARTDKIGDSSANATHVDDDHDGDRDGDDEDIGHVAAGEHEDDEEASLNVSNNHNNNNTDSNNSCSRKNNNNNNSETQHVALRDNNVNEQHVAHSAEDEDCTNNNTNTNNNNNNNNNNEKRKKRNASNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNSNSNNNNSSKNNNNNHSSQSSDNNNVFKTTDLTSTHQHNDDDDDDDDNDRDNEMRDGDDDEDTDLANDEQQHAAMANNRHDDVNDKEDAEEQDAEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAINAASEDAASHHQLQQQQQQPQLHQQQQQQQQHLHNSSNSNSSSAAGSDPLNHHHHGHHHSHPHGQILHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAVVAEDNNNSLTPNTNAAVAAAAMAAHAQHAAALGAPNFLPNLPSLPAFQFAAAAAAGQDARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLLKNNAAAQQQQQQQQEHQRRHASDDTHSNEDSKSPPQSCSSPFYKVEQQIKQHQQQHQQQLHVSEHAQREQREAAAAAAAVAVHQQQQQREQREAAQREQQQRLRHEDLAQDKMARLYQELMARTPREPTFQSFLLSPFFSGAAGMPGAAANPFPPLADENMRHAFEREIAKLQQQQQQQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSGSSSSKDGERGDDGERSFPALPHARKSEGGNTPAPPAPPAPPATASGGGSSGANAANTAVASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQQSQQQQHQQQHQQQAQQQAAAAAQQAQQQAQLLHHQNMLLTSPGLPPQHAISLPAASTPSGQAGGNPAVTGTPGSGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFATAAAALLGRSLAGIPGAAAAAGAAAAAAVAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPEATPISDYEKALQKSALASAAAAAAYLSNARSSRRKPAAPQWVNPAGAGTPTAAGAANVGVAGVAAGDGSSERIINGVCVMQASDYGRDEGDSVKGGDSNADAEHDDHAQLEIDQRFMEPEVRIKQEEDDDDEQPPQQQQQQQSEEDAARLAADADKQLKVINEEKLRLVRVRRLSSNGDAEEHCAAAQQATAAAAAAAAAAAAAAAVAPAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00530161;
- 80% Identity
- iTF_00560935;