Basic Information

Insect: Drosophila nigromelanica
Gene Symbol: JARID2
Assembly: GCA_004149445.1
Location: SCDR01000548.1:55779-63913[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.9e-22 2.2e-18 66.9 0.0 6 89 1929 2010 1924 2010 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.9e-22	2.2e-18	66.9	0.0	6	89	1929	2010	1924	2010	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAAACAGAGACCCCGCCAACGTCatcgtcggcggcggcggcagctttGGCTGTGGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAGGCACAGCGTAAATTCGCGCAAGGCCAAAGCGCGCCCAACGCAGCGGGTGCATTTAGTGCTGCCAGCgtcgcagcagccgctgctgcggcggcggcagcagcagcggtagcGGCATCATCCGGACCAAGCACATCCGCAGAGAGCCACCAACCACCGATTGAGATATTGCCCAACAAGTGTCCGAAGCCGCAGGATTTTTTAACGTTTCTCTGCTTTCGCGGCACCTCCGCGCTGCCCGCCCACTTGGACTATCTGAATCAGGGCAAGTCCAAGGCCAGCGACGCCCCGCCAAGCAGcgatgccagcaacaacaacaacacaaagaagaagcagaacagcagcaaaaagaaacGCGGCAGACCCGCTAAacagcaagcaacagcaaaagctggcgctgagcaactgcagcagccgcagttggCAGCAACTGATAAAACAGCTAGTGATAAAATAGAAGTAGCAGCGCCTCCGCaaccgcccccgcccccgtcGGCGCCGCCTCCGCTGCTGGCGGGCGCAGTGCGCAAACGCGCCGAAGTGATAGCCGAGGGCAACAGACGTGGCGCACGACGCACCGAGACCTTAAAACGTCGCTCAAATCGGGCCAGCAACAGGGAGAAGGAGGACGAGCcagcgcagctgcagcaacagcgcaaGGCCGATGCAGCCGAGCAGGAGGAtggggaggaggaggacgacgaAGACGAGTTCTTTTCGGCGCACGACGCCAGCTCACGCAACGGCGGCGCTGATGAGTCCAAGTCGGAAACAACGCAATCGAATGCCAAACGCGGACgcagccaagcagctgctgccgcaggcAGGAAATCAGCTGTGAGAGCAGCCGATTCACCAGCGTCCACAGAGATGCACAATAAGGATAATCATAAGGAGAAGGAAAAGGCGCCCGTGAAACGTGTGCGTCAACGTGAATCGCCCATATTTATACCCTCACCCGAATCCTCTGGCCGCATGACACGACAGCGGGCTTTTTTTGAGCCCGTCAAAGTGCCGCCCAAGCAGGagaaggagcagcaggagACGGACGAGCACGAGGAGCCAGCTGCCGCGGCAGAGcccaagaaacaacaacaacagcagcagatcaCCAAGGAGAAAACCAACTCCAGCATTTATGCCAAAGATgcggccaagcagcagcagcaactagaGAACGGTGGCCCAGttactgcaacagcagcagcagcagctgcaagtcTCAATGTCTTCGACTTTAGCTCGGATGATGAGCAGCCGCTGGCCAAGGCCATCAAGCTGAAAAAGGGTGGCAAAAAGGCTACCGCGggagcggcaacaacagcagccgccacaGCCACCGGTGGGTCCACAGCCAGCGCACGTGGACGCAAATCGGCGGGCGGGTCggcaaaaaagcaacagcagcagcgggtggAGGAGAAGGCGGAGGCGatcgcagcagctgcgccgcctgccacgcccagcaaGGCGGAAGAAGCGCCGAAAGCGAAGCGCGGCAAAGCAGCGCCCAAAAAGAAAGTCGAGCAGCCGGAAACCCCAAACGACGATGAGAACGACGACCGAGAGTCGGAGTCAGCACCGCCCTCGCCGAAGAAgtcgagcaacaacaattcgcGTCCGGCGCGTCGCCAGGCGCAGGCCAAGGCCAACAAAGGAGAACGCTCGGCGAGTCCCAGTCCGAATCCGCAACGCAGCCAACGGCCGTCGAGGAAAACGAAGGAGGCGGCGGCCATCTACATGGGCATCATCGGGcacaagctgcagctggccgaCGATGAGGAGGACGACCTGTCGCTGAGCAGTTTTCCGGACATACCCAATGTCAAGCAAATGGAGAAAATGGAGAAGGAGATCAAGAAAAACGCGGCGGGCAAAACGAGCACAACGGAAGCCACAAAAAAgtcagcagcggcggcagcagctgaagcgggagcagcagcagcaggaacgaGAGCGGAAGCGGCTGCAGGAGCAGTTGCCGAGCCATCTGAaacgactgcagcagcagcgccgccgacGCCCAGGCGCGGACGACCGCCGAAGCAGGCAAAAGGAGGAGCGGGAGCGGCAACTGGAGCGGGAGCACCCACAGCCAAGCCACAAATTGAGGGCATGCTGGTAAAAAAGGGTGCATTGGCGCTGGCCAAAGCCAAGTccgaacagcaacagcaacaacagcagcagcagcagcaacaaaaagtcgACTCCGATGCGGAGGAGGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGCAAGCTGGAGAAGAGTTTTAGCGACTCCGATGATGAGCCGCTGGCCATTAAagtgccagcggcagcagcagcagcagcaacagcaacaacaacagcagcagcagcaacaacaactgcagcagcagcagcagcaacaacaacagccaacgccagcaacagaagcaaagcggaaagtgcaacagcagcaacaacaacagcagcagcaacagcaacagttgctgcagtAACTGTTAAGCAGCCGCAGGTGACGCCCGGAACCCAGTTGCCCGGAACCACCACGCAGCTAACGATGCTGCCGCTGACCGCCAAGGCCTCGCCCTACTCCATATCGCCGCCCAGCTACGGACCCGCTGCAGCCACACTGAAGGCCATGGAAAAGAAGTCACCGGTGCCCACCTCGAAGATTCTGAATGTGCCCGCCACCTATGCGCTGCCCGGCTCCGGTGTGGGTGTTGGTGTGGGCGTTTCAAGCGGCGCTGTCGGCTTCGCCAAAACGTCGTCGTACTTGCCGCAAGCATCGCCGCATTATCACACATCCTACGTGCGTCCGCCCACCTTTGGTGTCGCCGCTGCCTCCGCTGCTGTGGGCAACAagacgccgcagcagcagcaccagcagcaacaacaacaacagcagcaacagctgcagcagctgcaggcgacCTCCACAATGGCCACGGCGGGCACGGTGACTTCTCCGCTGAAGTATCAGACGCCGCCTACAACTTATCCGCCGCCCATTGAGGCGTATCAGTGTCCCAAAATAAATCCTAATTTTTTAACGCCCAAATATGAGCGCAGCAGCGTTTTGCCgcgcgccaacaacaacaacatcatcatcagcaacaacaataacaacaacagcagcagtggaaACAACGCCGCcatcggcaacagcagcaatagcaacaacaacagcaacagcttcacGGCGCCGACAGCAGCGCGATCGACGCTCAGCagcctggccacgcccaccgtcAGCGCAGTGCCGCCAAAAAGTCCCGCAATTGGCCAAACTCAAAGTCTAAATCTTAGTTTGACGGCAACGCAGCCGGCTGTGGCAtccacatcagcagctgccgctgcggccgctgcacagcaacaacagcagcaacaacaacatcatcaacagcaacaacaacagcagcaacaacaacagcagcaacaacagcagcagcagcagacgacgtcaaatcagctgcagctgacggCAGCAGCGAATACGCCCACAGCgacagccacgccccctgcaacgggcagcaacaataacaatgcggATCCGCTGAAGGACGAGATTGGGAGCATTTTGGCGCAGGCGACGCTGATGCCCAGCAAGGAGGAATCGGGCAAGATCTTTGGCATAGCCAGCGTCAGTCTGGCGCAGAGTTCCGGGCCGGACAACACCAAGTGCACGCTGGGCAAGTGCGGATCGATTCATAAGCCGGTGCTGGGTCCGGTGGTGCCCACCGAAGTCTACTTTGGCGACCAGCTGTCTAGCAAGGAGCGCCGCAAGGCGAAGGTGAACATGACGCACGAGCAGATCCAGAAGTGGCTCATCGAGTGCAGCTCGAATCCGGACGAGATCCAGGATGATCTGGACGATGATTACGACGACAGCATGCGGCCACAGCAGGCGCTAACGCCGCCGGGCCCGACGCGCGACGACAAGGAGAGCACCAGCTTCAGCAGCTCCTCGAAGAATACGCGCGGCGAGCTGGGCAAGAGCGAGAGCGCCTGGTCGGCCAAAGGACCCTCGCTGAAGGCGACGCCCGTCCTGGTCAGCACAGCGTCGGCGGCTGCCTGCAATCGCAAGGACGCCGAAATGGAAACGGAAACGCTCGACTTTGACAAGTGCGTGACGCCCGTGAATCTCACGCAGAAAACGCAGCTGGAGTCGCCAGCGGGCGAAAAGAAATCCGGCGAGAAGAAGCTGAAGAATGCGGCCGGCGCCAAGGCGACCGCAGCGCTGtccgctgcaacagcaacagcgccagcagcagcgacgggCGGCAAACGCAGCGCTGCCgcagcgacgccgacgccgagtgcgacgccaacgccgccgcccagcAAGCAGAAGGCGGGCAACAGGAAACAGGCGACAGCAGCCGCCAGCAAGCTGTCCACGCCGCCGccgaacagcaacagcaacagcggcaacacgCCAGCaacgggagcagcagcagcaggagcaacatcGCCAGCGAAACGAACGCCCGTCTATCAGAGCCAAGGCAAAGGCAGCAAAGCCCAGACGCAGGCGGagcacaagcagcagctgcagtcgtCGAAAGCGGCAGAGAAGACCTCCATCTATGCCTTCGGCAAGGAGGAGGagacaacggcagcggcagcaacgaacacagctgcagccgcggcaactgttgctgcagcaggcaAAGCAACAAATCGGCGACGCAACGCAGAAGCCGCTGAAGCGGCGCCCGCGCTGAGTGAACGTTCGCCGACAAAGAAACGCGCAGCAGCCgcggcagcggcgacggcggTACAGCTGACGCTCAGTCCGACGGACAAGCTGGAGAAGCCGaaggcaacagcggcagcagcgcgcaagaagcagcagcaacagcaacaacaacagcagcagcagaagcaggcagccgcagcagctgccgccagcGCAGGCGGAGATTCGGATGCGGAGGGCGCCACCTTCTATATACCGCTGCTGCAgggcgccagcggcggcgatGGCGGCATTCAAGGAGTGGCCGTTAAGCTGGGACGCGAGGGACCCGACGGGCCCAACCAGAAGGTGGTGATGCAGGCGACGCTGGTGACCAAGGCGCAAATGGACACCAACTCGAAGCCGCTGCCGGACAACGAGCTGGTCAAAACGCTGCTCAACGCGGCCACGACGAGTGAAGCGAACGCCACAGCCGCCACAGCGGCTGGCAACAGCCTGAAGGCGAGcacctcagcagcagcagcggcggcggcagcagcggcatctgcagcaacggcggcggcagcaaccaGCCTGGTGCGCGTCAACTCGAATTCGTCGCTTTTCTCCGGCTCCGGCAAGTCGCGCACGGCAGctgcggcaacggcggcggcgagcACAGCCCTGGCCAAGAAGTACAAAGATGACACGCCCATCAAGATGGCCAACAACACGGCATTCCCGCGACACGACGATCCCACGCAAATGGTGGAGGCGCCCATTTTCAAGCCCACCGAGAAGGAGTTCGCCGATCCGATAGAGTTCATTGAGCGCATCACTCCGATTGCGGCGCGCTTTGGCATCTGCAAGATAATACCGCCGGCGAGCTTCAAGCCCGAGTGCCGCATCTCGGATGAGATGCGGTTTACGGCGTACAATCAGTACGTGCACAAGATGCTGCATCGCTGGGGACCCAGTGCCAAGGAGCTGAGCGCGATCAAAAAGTATTTGGCCACGCAGAGCATTCTGATGAATCATGCCCCGTGGATTGGCGGCATGGAAGTGGATCTGCCGCGTCTCTATCACACGGTGCAGGAGCTCGGCGGCCTCAAAGAGGTCATCGAGAAGAAGAAGTGGGCCCGCGTCGCCGAGGAGATGTGCATACCGAAGCTGGCGCAGGATCGTGTCACCAAACTGGATGACATCTACTGCAAGTACTTGTTGCCCTACGACACCTTGTCGCCGGCGGAACGACAGAAGCTCTTCGACGAGGTCGAGGCGGATTGGGCGAAGCGGGAGGCGCGCGCACGTCGCAATGCGGATCGTTTTGTGAACAGCACGGAGAGTGTTTCGAACGAGGAGGACGATGTGTCCAccgacgaggacgaggagtCGGAGGAAGAGATCGACGGCGTCTCCATGGAGTGCATTGTGAAGGGACGCAGCATGGCGCTCAGCCAGTTCTATCGCATAGCGCGCAACACGATGGCGCTGTGGTTCAAGAGCACCGATCCCACGGTCAATGAGGTCGAGGCCGAATTCTGGCGACATGTGGCCGTGCGCGACAGTCATGTGTGCGTCCATTCCGGCTCCATAGACAGCTCCGGCTGGGGCTATGGCTTTCCCAGTCCGGGTCCCAAGGGCAAGGGCTCGAATTATGCGCGACATCCCTGGAATCTCAAGGTGCTGACCAACAATGCCGGCTCCGTACTGCGCTCGCTGGGACCTGTGATGGGCGTCACTGTGCCCACGCTCCACGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTACCGTGATCCCCACGGCCTCTCCTGGATCGAGTATCTGCACACGGGCGCCTCAAAGCTATGGTATGGCATACCCGACGACCAGAGCGCCAATTTCCGATCGGCACTGACGTCCCTGATACCGACCCACTGTCAGAACAAGACAATCTGGTTGCCCTGTGATACGGTGATGGTGCCTCCGCACATGCTCACCGATCGCGGCGTCTCGCTGTGCCGCATCGAGCAGAAGCCCGGCGAGTTCATTGTTGTCTTTCCGCGTGCCTACACCTCCAGCCTGGCCACTGGCTATGTGGTCTCCGAGAGCGTTTATTTCGCTACTATGTCCTGGCTGGATTTGGCCAAGGATGACTTCAGGgACATTCATGAGAGCTGTGAACCGGCCATGTTCTCGCTGGAACAGCTGCTTTTCGCCTTGGGCTACGATCAGCGCGTCAATTCGGACACATTGCAACAGATGCTGCCCATGCTGAACGAGGTCTGCGAAAAGGAATCCGCGGCACGCGAGCAGCTCAGGGCCGCTGGCGTCACATCTACCGAGAAAGTGCAGGCGGAGAAGGGTCAAAAGgcgaaaaagcaacagcagccgccataCAAATCAATTGAGAGCGAATGCGATCTGTGCCGCGCCAATCTGTATATATCGATGGTGCGCACCGAGGAGGGCAACGTCTACTGTCTGCAACATGCGCTCAAAAATCTCAATAATGGCAATATTCAGGCCAAGCAATGCAAACTGATTTATGCGTACAATGTGGATGACATACAGCAGCTGATACGACAGCTGCAGGAGAAGATTACCCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPTSSSAAAAALAVESSPEMPKRTKVQAQRKFAQGQSAPNAAGAFSAASVAAAAAAAAAAAAVAASSGPSTSAESHQPPIEILPNKCPKPQDFLTFLCFRGTSALPAHLDYLNQGKSKASDAPPSSDASNNNNTKKKQNSSKKKRGRPAKQQATAKAGAEQLQQPQLAATDKTASDKIEVAAPPQPPPPPSAPPPLLAGAVRKRAEVIAEGNRRGARRTETLKRRSNRASNREKEDEPAQLQQQRKADAAEQEDGEEEDDEDEFFSAHDASSRNGGADESKSETTQSNAKRGRSQAAAAAGRKSAVRAADSPASTEMHNKDNHKEKEKAPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQEKEQQETDEHEEPAAAAEPKKQQQQQQITKEKTNSSIYAKDAAKQQQQLENGGPVTATAAAAAASLNVFDFSSDDEQPLAKAIKLKKGGKKATAGAATTAAATATGGSTASARGRKSAGGSAKKQQQQRVEEKAEAIAAAAPPATPSKAEEAPKAKRGKAAPKKKVEQPETPNDDENDDRESESAPPSPKKSSNNNSRPARRQAQAKANKGERSASPSPNPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKQMEKMEKEIKKNAAGKTSTTEATKKSAAAAAAEAGAAAAGTRAEAAAGAVAEPSETTAAAAPPTPRRGRPPKQAKGGAGAATGAGAPTAKPQIEGMLVKKGALALAKAKSEQQQQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPAAAAAAATATTTAAAATTTAAAAAATTTANASNRSKAESATAATTTAAATATVAAVTVKQPQVTPGTQLPGTTTQLTMLPLTAKASPYSISPPSYGPAAATLKAMEKKSPVPTSKILNVPATYALPGSGVGVGVGVSSGAVGFAKTSSYLPQASPHYHTSYVRPPTFGVAAASAAVGNKTPQQQHQQQQQQQQQQLQQLQATSTMATAGTVTSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSSVLPRANNNNIIISNNNNNNSSSGNNAAIGNSSNSNNNSNSFTAPTAARSTLSSLATPTVSAVPPKSPAIGQTQSLNLSLTATQPAVASTSAAAAAAAAQQQQQQQQHHQQQQQQQQQQQQQQQQQQQTTSNQLQLTAAANTPTATATPPATGSNNNNADPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEVYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDYDDSMRPQQALTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSTASAAACNRKDAEMETETLDFDKCVTPVNLTQKTQLESPAGEKKSGEKKLKNAAGAKATAALSAATATAPAAATGGKRSAAAATPTPSATPTPPPSKQKAGNRKQATAAASKLSTPPPNSNSNSGNTPATGAAAAGATSPAKRTPVYQSQGKGSKAQTQAEHKQQLQSSKAAEKTSIYAFGKEEETTAAAATNTAAAAATVAAAGKATNRRRNAEAAEAAPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATAAAARKKQQQQQQQQQQQKQAAAAAAASAGGDSDAEGATFYIPLLQGASGGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDNELVKTLLNAATTSEANATAATAAGNSLKASTSAAAAAAAAAASAATAAAATSLVRVNSNSSLFSGSGKSRTAAAATAAASTALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSILMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMALSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKITHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00567321;
80% Identity: -