Dnig004287.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- lz
- Assembly
- GCA_004149445.1
- Location
- SCDR01000754.1:37596-55855[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.59 3.9e+03 -2.1 0.8 49 87 137 176 132 183 0.65 2 3 1.4e-70 9.1e-67 223.1 0.0 5 129 184 308 180 308 0.98 3 3 2.2 1.5e+04 -3.9 0.0 27 60 333 367 330 374 0.66
Sequence Information
- Coding Sequence
- ATGCATTTGCATCTCTACAGCGAAGCGGccgcgacagcagcaacagcaacagcgacagcatcGACGCCGGCAGACGTTGtaagcaacagcggcagccacacTTTATACACGGGCTCGACGGCAACGGGCACAGGAGCCGTCTCAGCTGTGACacccgccagcagcagcgccagcgccagcggcggcggcggcagcgccagcggcagcggcatcggTAGCGGTTGCAATCGCAGCATGGTCACATCGTCGGTGTCGCCAACGGGAACGGGCTGGTCAGCGCCTGCCGATTACAAGAGCGCCACAACAGCTGTCACAGCGGCCGCTGTAGCGGCGGCGGCCGTCATGTGCGAGGTGCTGCCCTCGAGCAGCGCCAGTGTGGGCAGCAGCTCGCCAACAGGTGGCGCCAGCAATGGCACTGCCAATAGTGCGCACAGCggtagcaacaaaaacaatggcaacaacaacaataacaacagcaacagcaataacaacaacaacaatgcagtGCACCAGGATCTGCTGTGGATGGAAAGATTTGTGCTAGAAAGACAGCAGGAGTATCCAGGAGAATTGGTGCGTACGAGCAATCCGTACTTTCTGTGCTCCGCCCTCCCCTCCCACTGGCGCTCAAACAAAACGCTACCGTTGGCCTTCAAAGTGGTCGCCCTGGCGGACGTCGGCGATGGCACCTACGTGACCATCCGAGCGGGAAACGACGAGAACTGCTGCGCAGAGCTGCGCAACTATACCGCCCAAATGAAGAACGGTGTGGCCAAGTTTAACGATCTGCGCTTCGTGGGGCGCAGCGGACGAGGAAAGAGCTTCACGCTAACAATTACCGTTGCAACAAGCCCGCCACAAGTGGCCACCTATGCCAAAGCCATCAAAGTGACCGTCGACGGTCCAAGGGAGCCGCGCTCAAAGACGAGCCCTTCCGGCGGTCCACAATATCGAGCCCTGGGTCTGGGCCAGCGACCATTCATTGATGGTTTCCCAAAAACTTTCCACGAACTGGAAACGCTGCGTCGCTCCGCGAAGGTTGCGGCAGCCACGACGGCAGCGGCCGCCGCTGCGGTATCGGTTGCATCGGCAGGCAACACTTTAACCACAAACGCTAGTATTGCCCAGCAATTGGGTAGCAATTACTCATCGTCGAATAGTACAATAAATTCGGATTGCCAGGGCTACAAGCCCAATGCGCCACAGATTCAAGAGACCGATCTGATAGGCGCAGCTGAGTGGACAGGCTCGGCCAGCTCCGGGGCTAATGTCGCCTATccggtgggcgtgggcgtgggtgtgggtgtgggcgtgggtgTTCCCTATCATGCGCACCACAGTCACAcccactcgcactcgcactcgcattcGCACAGTCACTCGACGCACCACCACCACGCGCACCACTTGCAACACCAAgtggcgctgccgccgccgccaccgccgccagccgCAGCGCCTGTCCCGGTGCCGGTGGCCAACGCATCAGCGATGAATCACTACGGCAGCGCCATGGGTGGCTATGATACAACCACCCTAGATGCGGGTAACTATCACATATCCACGGTTCTGCCAGAAATGCACGGCTTCTCGGCCGATCCGTATCAGACGGCAGCCGCGGCTGGCGGCTATTGCGGGGCCAGCTCCAAGTCGGATCTGGAATCGTTGAACGCCAGCTATGGAGCCGCCTACAACAACGCAGCGGCGTGGTCGAATGGCTATAATAACTATCAGTACGGTAGCTGTTCGGCGACGGCAGCACAGTATGGCGGAGCTGGTGGACATGGATCGGCGCCACCACCTCCAGTGGTACTGTATCCACAGCTCTATTCGACCGTTAACCAGAACCAGATACATCTGCATCTCCATAGCAGCGAAAAGCTGGAACAGTACCTGGCCACAGACCAGCAATTGACTATCAGCTCACTTGGCGGTAATCGTTCCAGCATCGAGATTGGCCTGGGAACTGGCGGCGGCAACGGAGGCGGCAAcggaggcggcggcgtcgCCCTGGGCGAACAGGAGCAGCAAACGGCGGTCGCCATCGCCGAGCAGGCTGCCGAAGGTGCCGCCCAAAACTATCACttgcatcatcatcaccaccaccacgaGGCGCAGCGACAGCTggaggcacagcagcagcagcaacagcagcaacagcagcagcagcagcagcagttgcagagCGACGTCAGCAACGAGGCGGCACGGGAGGAGGACGTTGGCGATATGACGCAGGTCTGGCGACCCTATTGA
- Protein Sequence
- MHLHLYSEAAATAATATATASTPADVVSNSGSHTLYTGSTATGTGAVSAVTPASSSASASGGGGSASGSGIGSGCNRSMVTSSVSPTGTGWSAPADYKSATTAVTAAAVAAAAVMCEVLPSSSASVGSSSPTGGASNGTANSAHSGSNKNNGNNNNNNSNSNNNNNNAVHQDLLWMERFVLERQQEYPGELVRTSNPYFLCSALPSHWRSNKTLPLAFKVVALADVGDGTYVTIRAGNDENCCAELRNYTAQMKNGVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPSGGPQYRALGLGQRPFIDGFPKTFHELETLRRSAKVAAATTAAAAAAVSVASAGNTLTTNASIAQQLGSNYSSSNSTINSDCQGYKPNAPQIQETDLIGAAEWTGSASSGANVAYPVGVGVGVGVGVGVPYHAHHSHTHSHSHSHSHSHSTHHHHAHHLQHQVALPPPPPPPAAAPVPVPVANASAMNHYGSAMGGYDTTTLDAGNYHISTVLPEMHGFSADPYQTAAAAGGYCGASSKSDLESLNASYGAAYNNAAAWSNGYNNYQYGSCSATAAQYGGAGGHGSAPPPPVVLYPQLYSTVNQNQIHLHLHSSEKLEQYLATDQQLTISSLGGNRSSIEIGLGTGGGNGGGNGGGGVALGEQEQQTAVAIAEQAAEGAAQNYHLHHHHHHHEAQRQLEAQQQQQQQQQQQQQQQLQSDVSNEAAREEDVGDMTQVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00538009;
- 90% Identity
- iTF_00541552;
- 80% Identity
- -