Dnig021818.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- grh
- Assembly
- GCA_004149445.1
- Location
- SCDR01000792.1:21452-38670[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 1.6e+03 -1.3 1.8 95 106 141 152 107 174 0.54 2 2 9.8e-64 1.3e-59 201.7 0.5 24 221 282 474 268 476 0.93
Sequence Information
- Coding Sequence
- ATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAAAGCAGCACCGGACCCAGCACACAGCAGAGCACGTTGCAGGCCCAGAGCCCCAGTCCGGGTCCGTACATAACCACGGACAGCTATGGCATGTATACGGCCACACGATTGCCGCCCGGCCCACCGCCCGCCACCACATTCATCACGGAGCCCTATTATCGCGAATACTTTGCACCGGACGGCCAGGGCGGCTACGTGCCCGCCGGCACCGCCCGCAGCCTCTACGGCGAGGATGTCTCCGTATCGGCGGCCGCACAACCGCAGCCCGTGGGCAGCGTCTACGAGGCGCGCTTCACCAGCAATGcgcccaccaccaccacagtGCTAACCAGCAGCAATGCGCACCACCacagtcaacagcagcaacagcagcagcaacagcagcagcaacagcagcaacagcagcagcagcagcagcagcaacaacaacaggaacagtCTGGCAAAAGCGGCGGCACACCATTGTATGCCAAGGCTATAACAGCGGCGGGTCTGACCGTGGACTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAACCACATACAGcagTCCTTCGACTATACGGAACTCTGCCAGCCGGGCACCTTAATCGATGCCAACGGCAGCATACCCGTTTCCGTTAACAGCATACAGCAGCGAACTGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCCCTGGTGGACACCAGCACAAATGGCTCGACACGTTCGCGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgacaaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATCATCTGGAGAGTCCGATCAGCTCGTCGCAGCGCCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGAATTACGCTGGAGTATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAGGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGGCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCAGTTCAGTGCCTCAGCACGGACTTCAGCAGTCAGAAAGGTGTTAAGGGGCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGCGACGCGACGGTCTTCCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGCAAGACGCGCGATGAGGAGCGTCGCGCCGCCAAGCGCAAAATGACAGCCACTGGCCGCAAGAAGCTGGACGAGCTTTATCACCCGGTCACGGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGGCAAGCCGCCGGTGCTCTTCTCGCCCGCGGAGGACATGGAGAAGAGCTTCTACGGCCACGAGACTGACTCGCCGGAGCTGAAGGGCGCCTCGCCTTTTTTGCTGCACGGCCAGAaggtggccacgcccacgctcaAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCATATATTGGATCAGAGTATGTTAACCAGCGCGCCCATGTCCGATTTTGGGCCACCCATGAAGCGGGGCCGCATGACCCCGCCCACCACGGAGCGGGTCATGTTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCCCTTCACGTGGTGCCGCCCACCACAATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGagcataaataacatatatcgCACAAATAAGAAGGGGTAA
- Protein Sequence
- MYATTGGTQIYLQTSHQSSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAAAQPQPVGSVYEARFTSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLGKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSAPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322405;
- 90% Identity
- iTF_00583440;
- 80% Identity
- -