Dnig012096.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- elt-1
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000746.1:62904-68501[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-16 2.5e-13 49.5 3.5 1 33 159 190 159 193 0.96 2 3 1.1e-16 1.8e-13 50.0 5.9 1 34 214 246 214 247 0.97 3 3 1.1 1.8e+03 -1.2 0.1 18 25 358 365 355 368 0.78
Sequence Information
- Coding Sequence
- ATGCCGcctcaaaataatttaaatagtcTTGCGTCAACTTTGAGCACACCGCCAGTCGCTAGCCAATTGTTTGGTGGCATCGAGGAACAGTCGACGGCAATGTTTGGTGCACCCAACGGGCTTAACAACGGATTTTTTGGGGCCAACACCAATAATGGCCTCTATCATGATCAACAACACctcagccaacaacaactgagcGACTATTACGGCAATATCCCACAAAGCCACTTTCTTGCCTCCGAAAATTCCAACGACTCACAATTGCAAAGGAATGGCTCGCCGGCCATCACTTCAACCCAGCTGCAGTCGTGTCTAGGCGCAAACAAACTTTCGATGCACGAATCCAGTATTTTGGATAGGAACGACAGCGACAATTCGATTGACGGCACGAGCATGAATTCCACGGGCCTGTCATCAACCAAGGCCTCTTCCACAAAGCTAAGGAGCAAAATTTCAGCGGACGATCGCGAGTGCGCCAACTGCGGGATCAATAATACACCTTTGTGGCGCCGCGACATTAACGGTCATTATTTGTGCAATGCCTGCGGACTCTACCAAAAGATGAACAGCGGCGCGCGGCGACCATTGGAGAGACCGAAAAAACGACAGaATACGCAAAAGAGAACAGGCGTTATTTGCGTCAATTGCAAAACTACGGTGACAACATTGTGGCGCCGTAACAATAACCAGGAGCCGGTGTGCAATGCCTGTGGACTCTACTACAAACTGCACAACatGGCGCGGCCGGTTAACATGAAGAAGGAAACCATCCAGCAGCGCAATCGCAAACTGACGACATCAATGGCTAATTCGACCTCCTTACACACTTCGATTTCCACGAAAGGCTCTTCCACGATGAAGTGTGTGTCGTTGAAAAAGGAGAAATTTCACGAAACGTCGCCGGCCAGCTCGGGCATTGgtagcaacaacaccagcgaCACGGATTTCAGCGATTTTTCAAGCAATGCTTTCCAACAACATTCCCAGCTGCAGAATGACAATAGCATGTTTTCGCAGGACCTCATTCTGccccaccaccaacaccaccaacaacaaacgaatataaaacaacaaaagttgttGTGCAACAGCAATGGAACGAATGCAACGCTGACGACGGCAAACATACATCAGACGACCACAAACAATATCAACATCCATCACTGGCATCACgtagctgctgctcctttcTCCGACGCGGCAGCAGCCGCACTTCTTTTTGAGAAAACCGTTCTACCTTCGTTTGCCGCCAACGACAAGTCGCCAACAGTCGCGTGGCCGGCGACTACCGCCAACTTTGGCTCCGCTTTCCCACAGCCCGCCACGCCGAACAGCAGCTGCACGCTGAGCGCAGCGGCCACTGACGGCGCCACAGCTCCCTATCTGTCCGCTGGCTATGGCGCCAACACGTATCAGTCGTTGTTCTTTCAAAACCAGACGGATGCCGTCATAGTAAAAGACCAAAAAGGCTTTCCCAAATCACCGCGCTTTACCGCCTGGTAA
- Protein Sequence
- MPPQNNLNSLASTLSTPPVASQLFGGIEEQSTAMFGAPNGLNNGFFGANTNNGLYHDQQHLSQQQLSDYYGNIPQSHFLASENSNDSQLQRNGSPAITSTQLQSCLGANKLSMHESSILDRNDSDNSIDGTSMNSTGLSSTKASSTKLRSKISADDRECANCGINNTPLWRRDINGHYLCNACGLYQKMNSGARRPLERPKKRQNTQKRTGVICVNCKTTVTTLWRRNNNQEPVCNACGLYYKLHNMARPVNMKKETIQQRNRKLTTSMANSTSLHTSISTKGSSTMKCVSLKKEKFHETSPASSGIGSNNTSDTDFSDFSSNAFQQHSQLQNDNSMFSQDLILPHHQHHQQQTNIKQQKLLCNSNGTNATLTTANIHQTTTNNINIHHWHHVAAAPFSDAAAAALLFEKTVLPSFAANDKSPTVAWPATTANFGSAFPQPATPNSSCTLSAAATDGATAPYLSAGYGANTYQSLFFQNQTDAVIVKDQKGFPKSPRFTAW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -