Dnig005596.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- Csrnp2
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000244.1:59686-66110[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 2.2e-14 54.1 0.2 2 77 267 342 266 381 0.79 2 2 4.5e-40 4.5e-36 125.0 8.1 94 216 429 551 403 553 0.84
Sequence Information
- Coding Sequence
- ATgAGGCCCTACCAATCAACGTGCTCATGGCAATTTTCAACGGATTCCGACATTGCCGCTAATGTTCCCGGAAACTTACTGGACTGCAATGGACCGCCACAGGTACAGCGCCACGCGTCGAACGTTTTTCAGACGCTGCGCGAAAAACGGCAACGGCTAATGATCGCGCAGTTCCGGCAGAATATCTGCGAGAACAGCGATGGCAGTGGATCGACGCTTTCTCCCGTTCCCATACTTGAACAACAGCAGAGTTTCACCTCGTCTTCAATGCCCTTTTCAACAACTGTTCAATTGCCCAGAGGTTTGCGGCCGCCTTCGACCGTCGACCCAACTGATGGAAACGAATTTGAAGACTGTCCGGCTTCAACTTCCGGGATGCAGGACGAAAACCGTCCACGTCAAGACTCTTTGAGTTTTAACAGGTCCTTCGACCTGCAAAAGTCGACGGATTTTCAAAAATCCATCGACAGCTTCACTTCGATTGAgtccaaatttgttttcgatGCAGAACTGAGTGCCGGATTGGAGTTGTGTTGCTCGCCCTCCACCTCTTCCAGCGTTTTGGGCGACGTTCATCCGATGATGAATAGCGACGGCGAATCCCAAGAAAACTCCGTACTACCGCTGCGTCGCTCGTCGCGTAAAAAGGTGAACTCTGCCAGCTGCTCCTTTGTTGAGCTGGACGCTACACCCGGCCACTCAAAAGCCAGTCGTCTCGCATTCTTTAACGACTGCAAGCTtgtgaGTCGTGGAGGAGAATTAATAAAGACGAATATGCGGTCGGTGACGCGCAAGCCGCGCAAAAAGAAGGTCAATTTTGGTGGTTTGCgtgtgttttatttcaatCGAGCGCAGGGTTTTGACACAGTCCCGATGGTTGGCAGCGTGGCATTagGTATGGAGATGAAGCACGACCATTGCAAAGACTATTCGTTCTTTGAGTTTTATAAGGCGAATCGTCGTgaaaatTCTCAAAAATGTGCCTCCTGGCGTTCCGCTCTCCAATCCCAAGTTTCACAGAAGACGACCAAAAAACcgctcaaatattttgaagtcATTAAAAGCGCTTCCGAGACTTCGTTGATCCCATTTTCGGCATCCTCTTCCATATCATCGAGCCAGGACACGTTTACGACTGCATTGGATGTCATGGACCCATTGTGTGAAGACCCCGACTCTACAATCACTCCGTTTTATGTCTACCCGTCGGAGATGCGAAACGACGCTGCGGCTGCGGACACAACGATTTTGCCAATGCCCGAAAATTACGACTCGGACTCTTCTTCGTCGTTGAGTTCCGAGGAGGATGTGGGGGACGATTTCTCGTTGATGGAATGCTGCTTTCGGCCGATTGATGGAAAGATTCGCAAAACGATACTCAAGCACGCCGGCATTTCCATTGATAAGTCTACTCGCGAAGAGTACAAACAAATTGTGAGCAGTCGTTTGACTTGTGGCTGCAGTTGTGCGGATGGAAAGTGTGTACCGGAAACGTGTGAATGCGCTCAGCTGGGAATTCTGTGTCAGGTGGATAAACCGTCGTTCCCTTGCTCTTGTACAGAAGTGGACTGCCAGAATCCGGAAGGCCGAATTGAGTTTGATCCGGTGAAGGTGCACAGTCATTACATGCAAACAATTATGCGCATTAAAGTTATCCAGAAAAGgggTCTAGAAAACAGCTCCCTCAGCCAGTCGCCGCAACACATTAAATTCGATAAAGACGGCACGGCAAAATAA
- Protein Sequence
- MRPYQSTCSWQFSTDSDIAANVPGNLLDCNGPPQVQRHASNVFQTLREKRQRLMIAQFRQNICENSDGSGSTLSPVPILEQQQSFTSSSMPFSTTVQLPRGLRPPSTVDPTDGNEFEDCPASTSGMQDENRPRQDSLSFNRSFDLQKSTDFQKSIDSFTSIESKFVFDAELSAGLELCCSPSTSSSVLGDVHPMMNSDGESQENSVLPLRRSSRKKVNSASCSFVELDATPGHSKASRLAFFNDCKLVSRGGELIKTNMRSVTRKPRKKKVNFGGLRVFYFNRAQGFDTVPMVGSVALGMEMKHDHCKDYSFFEFYKANRRENSQKCASWRSALQSQVSQKTTKKPLKYFEVIKSASETSLIPFSASSSISSSQDTFTTALDVMDPLCEDPDSTITPFYVYPSEMRNDAAAADTTILPMPENYDSDSSSSLSSEEDVGDDFSLMECCFRPIDGKIRKTILKHAGISIDKSTREEYKQIVSSRLTCGCSCADGKCVPETCECAQLGILCQVDKPSFPCSCTEVDCQNPEGRIEFDPVKVHSHYMQTIMRIKVIQKRGLENSSLSQSPQHIKFDKDGTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -