Dnig009732.2
Basic Information
- Insect
- Drosophila nigricruria
- Gene Symbol
- HIVEP2
- Assembly
- GCA_037075265.1
- Location
- JBAMCI010000143.1:4231570-4239429[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00011 0.008 16.7 0.5 1 23 239 261 239 261 0.98 2 8 0.0021 0.15 12.7 3.5 1 21 267 287 267 291 0.89 3 8 0.013 0.91 10.2 0.1 1 19 893 911 893 914 0.93 4 8 2.8e-06 0.0002 21.7 2.0 1 23 1636 1658 1636 1658 0.99 5 8 3.1e-05 0.0022 18.5 5.3 1 23 1664 1688 1664 1688 0.92 6 8 0.00052 0.037 14.6 2.6 3 23 2174 2194 2173 2194 0.97 7 8 0.00081 0.058 14.0 1.2 1 23 2200 2224 2200 2224 0.91 8 8 0.0026 0.19 12.4 2.7 1 23 2245 2269 2245 2269 0.92
Sequence Information
- Coding Sequence
- ATGACGCTacagcacagcagcaacaccaccaccagcagcagcaccaccagcaacaacaacaacatcatcaacaacagcagcagtgacactggcagcaacagcaacataaacacaaacaacaacaacaatgatgttgctgctgcaacagcaattgtTGACTGGAAAAGCAGCTCCAATAATCTGCGCTATTTGCATAAGAAGTTTAAGCGTTTGGCCAGCACCACAGAAACGGAGGCAGCAAGCGAAACAACTTTGCGCAGCACATCGCTGTCGTCGAACAGCTCATTGTCGCCGCCCACGCAATTGCCGCTGCTCAATGGACAcgagcacagcagcaacagcaacaacaacaacaacaacagtcatGAGGCAGAGAGTTTtagcaaaaatgttgctgttgcggttgcagttgcaggtgcaccacgcacacgcacgccattgagcaacagcaacaacatcaacagcagtagcagcagcagcaactatgCCAGCAATGCAACATTGTCGCCTGCAACATTTgcacagcatcagcagcaaacgcagccaacgacaacagcagcagcagcagcagcaactgttacgctagcagcaacagccaagccagcagcagcagcagcaacatatgcaacagcaacatctgccatgccagcaacaactgcaacatctgccatgccagcagcaacagtcacGCCAGCAGCAACTGGCCTCAGTCGCTATATCTGCCCGTACTGCAATCTAACTTGTGCCAAGCCGTCGGTGCTACAGAAACACATTCGAGCCCATACGAACGAACGTCCATATCCCTGCGAGACATGCGGCATTGCCTTCAAGACGAAAAGCAACTACTACAAGCATTGCCGTTCGCGCTCACATGCGGCGCGCATGCGCGGCTTGGATGTGCCGGCCCACGAGGCGGATGGATTATCCGATCAGGATGGCGATGGAGATCTCAGCAATAGCAGCTCGGAGCTGTTAAGTGTGGAAATTCTAAGTCGCGCTGATTCGCCATATGATGATCAGTCGATGGCCTCGCCAACGCCCTCGCCCTCCACACTGTCGGCGGCGAAGAGCGCCTACCTGCAACAGCCACCATTGCCGCAGCATATGCAACAGTTGCCGCTGGGCTCGCCTGCTGCTGGCACCTTGCCGCCAGCAACAGTTGAGAATTTGCACTCGGCGACGGCGCAGCATCGACAGTCGATAGACTACAAGCCATACAAGCCAAAATTTCATAATGCAGCGCTCTATGCGCCAGGCAGCAgcaaagagcagcaacaacagcagcagcagcaacaacagcaacagttgctgccacagcaacagcaacagaagctGCCACAGCCTTTGCTCGTGCATCCCACGCTCTCGCCCAGCACTCAGCTGAAGCTGAACAATCACATAAACTCgcatcagctgcagctgcagctgcaacagcagcagcaacaacagcagcaacagctgcagcagcaacagttgcaacagcagtcattgttgctggcagctgctgctgctgctggcaatgcTGTTGCCCTGCCGCCACCTCCATTGCCCACAGGCGTTTACTATTTGGGACAGCCGCCATATTACaatccaacagcagcagcagcaatgcatCAGCATGCGTTGGcgctgcaacagctgcaatATCAGCAACATTAtcagttgcaacagcaacagcagcagcaacaacatctacaacaacagcaacagcaacactcgCCACTTCTCAAGGCGCcaacacagcaacagcagcaacagttgctgccacagcaacaacagcagcagcagcaacagttgttgccacagcagcaacagcAGCTGCCTCGCTCTAATAGTCAACAGGcgccaccagcaacagcagcacctgccacgcccacacctgTAGGCAATTTGAGTAGCTTTGCCAGCGGCATGCAAGTGAATGTGGAAAAGGTGCAGGAACACATTTCGAAATTGATCTCACAGAATGAAGCCATCGTGGAGAATAAGGAAATATTGCTGCAAAAGAAATATCCCAAGCAATTGAATCGTTCGCGCAGCTTcaacaatgccaacaacaacagcaacagcagcaacaacaacagcagtagtCAGCAGCTGGGCGATGCTAAAGTAAACTTGGCACAGAGCATAgtacaaaagcaacaacaacaacaacagcaacaacaacaacaacagcagcagcagcaggtgcaattgcagcaacaacaacaacaacaaatgcaacatATACAACAATATAGAGTCATTGAGCCAGTGAATGGTTTGCTcaaacgcagcagcagcagtaacagcagcagcaataatgcTTATGCAAATCTTAAAGCCACGCCCCCTGCTGCTGCCTTAAATGTCAAATTGCCGCCGCCAGCAACAGTGTTGCAATCGCTGCAATATCGTCAGGATCCAGCAATGCCTTTAAACAagctcgagcagcagcagcagccacaagcgACGCCCTCGCAGCAGCCCTTAAATCTATCCGCCAAAACAAAGCCAACAAaggtggcagcaacaacaccagcagcaacatcagcaacaccaaccgcaacaacaacaattgcagccaAACCCGCAACAGTTGCTACCGCAGCTGCCAACAATTCGATTATCAAGAATCTATTGCTCAACGCACGCGGCCTGGCCGTGCCCATTGGCGAGGGCGACGATGCCGTCTACTCCTGTCCGATCTGCGCCAACGAATTCCGCAGCGCCGACGAGCTGAAGCAGCACAACAGCACCTACTGCCAGGACGCCAGCAGCAGTGCGCCCATCAGTCCCGCCTCCTCGCCCAGCAGCAAATACTTTCGCTCCAATTCCATATCGTTCAGCCTGCCCGAGCTCAAGTCTCACATGGCCAACTCGAAGAACCCGTTGTCCTTGGCCAAGTTGGCCTGGTCGCAGCTCAAGACGAAGCCAAGTAGCTTGGTGTTGAGTCGGTTGAGTGCGGCGCAGTCGCCGGCACGCACCAGCACTACggcaacaacagttgctggCAGTAGCAgtgggagcagcagcagcagcaacaacaacagcagcaattatctagcagcaactgttgctggcaataatgcaacagcaacaattgctagcagcagcaacaacaacagcctgtacaacaacaatctaacagcaacaattgctaaCAATACACACAATCTaccagcaacagttgccgttAGCATCGATGCCAACAATGTTGCTCTGCGCTTCGTTGACGCACCTTTGCCCTCACCTGGCCCGCTGCTAGGCAAAACCCCGCTCGTCGACTATGCCGCGCCACGCAAAGCTGCCGATGCCCAAGTTGTGATAACCAAAATGCACGAGGATCGCCTGGAGAACATCATAATCGAGAGCTCGGCGAAGCGCGCTAAGCTGAGCAATGAGAGCGCCTTTGCtctgccagcagcaacagcaacaggtgtgcaacagttgctgttcAACAACAATCAAGAGCTGCCTGGCTTCAACACGGGCAAGGAGGAGCGTTTGAGACGCTTCACCTCGTCCGGTGGCTCAATGATCCCCATCTCCGAGTGCCCCGAGCTGGACAAGAGTCCAAAGATGATTCGAACGCCGTTGTTGTCGGGCGGCAGCTTTCAGGAAATGTCACCTAGGCTGAGTGAACCGAAGCCGAAGCCAGCATTTCTGCTcaatgccagcaacaacaacagcaacagcaacaactcccagcaacattttcaatttccgCCCATCAATTCGATAACTGCCTTCAATCCCCTGACGCTGTCCGCTATGAGCGAGTCGAGTGGCAAAGCTATACCCTATGTGCCGGGCATACCGGGTCCGAGCAGCCTCACAATGCTGCCaacaccgccaccgccgcaacagttgctgctgcaacggcCACCAGCAATGGATGCGCCGCCCTTCAAGAAGTCTTTGTCGCCCTTCGGCGGCGTCCAGAATTTGCCCAGCGAATTCAGTCGACAGCCGCCGACGCCCGCCCAACGCAATGCCCTGCAAtggcagagcaacagcagcaacaagcaactggcagcaactgttgctgttgctggcgatGGTCTGGCCATGCAAAAGTTCAATTTCCTGCGCATGGCTGACAATGTgaaggagcaacagcagcagcaggaggtgCGACATTTCATATTCGATCCGTTGCATGTGGAAACACCAGAGAATgaagccgcaacagcagcaacatcaactgttacagcagcaacaacaactgtgacagcagcaacatcagctggcacagcaacaactgttgcTAACAAGTCGAAATTCTTGCGTCCCACAAGCTTGCCGCTGAAGCCGGGCACGTTTACGCCCAAGCGCCATCATGGGATCACACCGACTGCAAATACCCTGCCTTTGATCTCGCCCGAAACGCCGCGGCCTTCGAAGTCTTGCGTTCAACTCTATCTGAACGGACATGCCTATACGTATCTGGGCCTGAAGTGCAGCACGAAGATGTTTTACTGCACAGTGAACTGTCCGCAGCCGTCGTATGTCGCCGGCATGCACAAGCTGTCGATGTACAGCGTTTGGCAGGTGTGCGAGGAGAATCAGCCTCATGCGCTCGGCTTCAAGCCGAAGCAGGTGATGTCGCTCTATGACTCCAGGCAGAAGATGTTCGGTTCGGGCTTCACTGTCGTCCAGGCCGGCGGCAACGCGCACAACTATGCACTCGTCAGCTCACAGCAAACGATCAGCAGCTGCTCGACTGTGAACAACAGTCAAAGCAAGTTCTATCAGCATCAAACGAAGCAGACGCCAGCGATTGGCGCGCTCAGCGAGGCGAATGTGGCAGCCAAGGCGAACGAGGAGGCAGCCAAGAAGCTGGAGCCAGGCCAACTCCTTGTGGGTGGCTATGAATCCAATGAGGACTATACCTATATACGCGGACGTGGGCGTGGTCGCTATGTCTGCTCCGAGTGTGGCATACGCTGCAAGAAGCCTTCAATGTTGAAGaaacacatacgcacgcacacagacgTCCGTCCGTTTACCTGCAGTCATTGCAGCTTCAGCTTCAAGACCAAAGGCAACTTGACCAAGCACATGCAGTCGAAGACACATTTCAAGAAATGCATTGAGCTGGGCATCAATCCAGGTCCCATGCCCGCAGATGGTGAATTCTTGGATGTCGACGTGGAGTTCGATCAGCAATCATCGACTTCGGCGGGCGGACGCACTTCCTCCATGGCTGGCGACTCTGCTGATTCGGATGATTATAGCGATAACGAATCGGAGAGCAGTGACACAGATGAATCCAAGTCCCGCTTGAAGGAGCATGAGGCAGCGCGTGGCTTGCTTTCACTCTCGATGACGCCGCCCATACCACAAAGTGTTTCTCCATATCCCGCACAGCTGGAGACCACAATGTCCGCAGCTAGTCCAGCGAATAGCATTGGCTCTGCTGGCGGCGCTTCCACGCAGCCCAAGCGTCAGGTATGCTCCTTCACGTCGCCCAAGCCGCCGTTCGACTATCAGAAACAGGAGCAATACTACTCCAATCCCGAGGAATCGAAGCCCAAACGTCAAGCGCCCACCGATGAAAGCAGTGCGCCCATGGACTTGACTAAACCCAGACAAATTGCCACAgtagcaacagctgcagcagcagcaacagttgctgccatGGAGTTGCCCAAGTCGCAGGCACAGCAAATGCGCGATGTCATCTTCGGTGCGGGCAACAACGAATGCGGCTTCATGAAGACTCTGATCTCGGTGTCGGACAAGGTGCGCATCTCAGCTGAAATGGAGGAGCAGGCGAAGCGCGAGAGTGAAGGCGAAGATGTGCTCCTACAGACGTACATCAAGGAGCAGGCGTTGCATAATGCTAAACGAAAGCAGAGCTtatatagcagcagcaacagctacctgatgaccaccaccagcagcagctgcatcagcagcagcaacaccaccagcagcaacagcagcaacatgcccattgtgagcagcagtcagcagaagATTGGCTTGATATATCATGAGCTGCCCAGCATAGAGGTGCATGAGCCAGAGGTGACGGAGCTGGGAGAGTTGGAGAAagaacaggagcagcagcaacaacagctgaagGCAATTGCTGTGAGCAGTCAGGAGAAGCAGCAGCTCGAGGagcgacagcagcaggcaacagctccaactcctgctccagctccgGTTCCAGCTCCCGCCACACACAATGCCAATTTGCCAGCTGCTGTGCAGCAGCCAGATGCCATCGATTTCAAGGGTGTgctaagcaacagcaacaacaccaagcCTATAGTCAgcgcagcgacaacagcaacagctgctgctgccaccgcaacagcaacagctatagTCAAAGTCTTGGCAACTGAGGAAGGCTATAAGTCGAGCAGcgagacagcaacagcagcagttgttgtcacagcaacaccagcaactgccacaacaacagcaccggcaacaccaacaactagcagcagcagcagctatggTGGCCGTGTGGTGCCCGCACCGCCGCCGCCCATTGCCAGCGATGCGCGTCCCATTTGCCTGCTGTGCAGCAAGACGTTTCAGCGCCAGCATCAGCTCACGCTGCACATGAACATCCATTATATGGAGCGCAAGTTCAAGTGCGAACCGTGCAGCATCTCGTTTCGCACGCAGGGACATCTGCAGAAGCACGAACGCTCCGAGGCGCACAGGAATAAGGTGATGATGACCTCGACCTTTGGAGTGCCGACCACATCGAATCCACGTCCCTTCGAGTGCACGGACTGTAAGATAGCCTTTCGCATACACGGACACTTGGCCAAGCATCTGCGCTCGAAGACGCATGTACAGAAGCTGGAGTGTCTGCAGAAGCTGCCCTTCGGCACGTATGCGGAGATTGAGCGGGCGGGCATTAGCCTGACCGAGATCGATACAAGCGACTGTGAAAATTCGTTGATATCGCTCAAGTTGCTGGCTCAGAAGTTGCTCGAGAAGGATCCGAATAAGCTGAGTGGCTATACGACGCCGTCAGGCATGCTGCAGCTAGCGGGCAGCGGCGGCGAGATGCCAGCTGCCAATCAGGACAGCGCCTCGGAGGACGGCTTCAGTGCAGCGAACAGTGCCGCGGCGTCGGCCATCGCCTCGCTGGACAACGACAGCGCCGGCAACACGCCGCAGCGCGCCAGCTCCATGTCTGAGGACGAGACTCTGACGAATGGGCTGAGCTTGAAGCGCCGCCTGCCCGCCAGCAGctttagcagcagcaacggcgacGAGAGCGACAATCCGCTGGAGACGAGCGAGAAGCGTGCGAGAAGCAACACGAATGAACTAACTTTGCCAATTGTCGGCAGCAACTGa
- Protein Sequence
- MTLQHSSNTTTSSSTTSNNNNIINNSSSDTGSNSNINTNNNNNDVAAATAIVDWKSSSNNLRYLHKKFKRLASTTETEAASETTLRSTSLSSNSSLSPPTQLPLLNGHEHSSNSNNNNNNSHEAESFSKNVAVAVAVAGAPRTRTPLSNSNNINSSSSSSNYASNATLSPATFAQHQQQTQPTTTAAAAAATVTLAATAKPAAAAATYATATSAMPATTATSAMPAATVTPAATGLSRYICPYCNLTCAKPSVLQKHIRAHTNERPYPCETCGIAFKTKSNYYKHCRSRSHAARMRGLDVPAHEADGLSDQDGDGDLSNSSSELLSVEILSRADSPYDDQSMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPATVENLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSKEQQQQQQQQQQQQLLPQQQQQKLPQPLLVHPTLSPSTQLKLNNHINSHQLQLQLQQQQQQQQQQLQQQQLQQQSLLLAAAAAAGNAVALPPPPLPTGVYYLGQPPYYNPTAAAAMHQHALALQQLQYQQHYQLQQQQQQQQHLQQQQQQHSPLLKAPTQQQQQQLLPQQQQQQQQQLLPQQQQQLPRSNSQQAPPATAAPATPTPVGNLSSFASGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNNSNSSNNNSSSQQLGDAKVNLAQSIVQKQQQQQQQQQQQQQQQQVQLQQQQQQQMQHIQQYRVIEPVNGLLKRSSSSNSSSNNAYANLKATPPAAALNVKLPPPATVLQSLQYRQDPAMPLNKLEQQQQPQATPSQQPLNLSAKTKPTKVAATTPAATSATPTATTTIAAKPATVATAAANNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKQHNSTYCQDASSSAPISPASSPSSKYFRSNSISFSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSPARTSTTATTVAGSSSGSSSSSNNNSSNYLAATVAGNNATATIASSSNNNSLYNNNLTATIANNTHNLPATVAVSIDANNVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAADAQVVITKMHEDRLENIIIESSAKRAKLSNESAFALPAATATGVQQLLFNNNQELPGFNTGKEERLRRFTSSGGSMIPISECPELDKSPKMIRTPLLSGGSFQEMSPRLSEPKPKPAFLLNASNNNSNSNNSQQHFQFPPINSITAFNPLTLSAMSESSGKAIPYVPGIPGPSSLTMLPTPPPPQQLLLQRPPAMDAPPFKKSLSPFGGVQNLPSEFSRQPPTPAQRNALQWQSNSSNKQLAATVAVAGDGLAMQKFNFLRMADNVKEQQQQQEVRHFIFDPLHVETPENEAATAATSTVTAATTTVTAATSAGTATTVANKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHALGFKPKQVMSLYDSRQKMFGSGFTVVQAGGNAHNYALVSSQQTISSCSTVNNSQSKFYQHQTKQTPAIGALSEANVAAKANEEAAKKLEPGQLLVGGYESNEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCSFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGDSADSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPYPAQLETTMSAASPANSIGSAGGASTQPKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRQAPTDESSAPMDLTKPRQIATVATAAAAATVAAMELPKSQAQQMRDVIFGAGNNECGFMKTLISVSDKVRISAEMEEQAKRESEGEDVLLQTYIKEQALHNAKRKQSLYSSSNSYLMTTTSSSCISSSNTTSSNSSNMPIVSSSQQKIGLIYHELPSIEVHEPEVTELGELEKEQEQQQQQLKAIAVSSQEKQQLEERQQQATAPTPAPAPVPAPATHNANLPAAVQQPDAIDFKGVLSNSNNTKPIVSAATTATAAAATATATAIVKVLATEEGYKSSSETATAAVVVTATPATATTTAPATPTTSSSSSYGGRVVPAPPPPIASDARPICLLCSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHRNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLAGSGGEMPAANQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETLTNGLSLKRRLPASSFSSSNGDESDNPLETSEKRARSNTNELTLPIVGSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00510052;
- 90% Identity
- -
- 80% Identity
- -