Basic Information

Gene Symbol
NCOR1
Assembly
GCA_037075265.1
Location
JBAMCI010000206.1:3530300-3536225[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-07 0.00021 21.5 0.0 4 43 764 803 762 805 0.97

Sequence Information

Coding Sequence
ATGGATCAGCAGCAGTATGTCAAGAGCCTCGGACACTTGCAAtcccatcagcagcagcagcagcaacaacagcagcagcagcaacaacaaatgcatcaccaccaccaccaacagcagcagcagcatcagcaacaacagcagcaacaacagcagcagcagcagcaacagcagcagcaatcgtcGAGGTCGGCAGCTAGTCCGCTGTCGCCGCCGCGTCCTGGACCGGGCAGCGCGGCGGCCGCAGCTGCGGCGAATAGCTATGCCAAGTTTGCGGATGCGCCGCAACATTTTATACAGCCACCGGCGTACAGCATTGGGATTGCGCCGGTGGCCAACTATCATCGGGAGAGTCCATATATGCGGATACCTCAGCTGCAGGCGTCGGTGCCGGAATTTCAGCGTGCGGCGCGTGCAGCGACggttgccgccgccgctgctgccgttggcGGTGGCAAAGGCGGACcgggcagcggcggcggcggcaacatTGGCGTCGTCTCCTCAGCCGCTGGCCcgggcagtggcagcagcggcggcgtcgTCCAAGTGGCCGGCAGCATGGCACCGCCAGGCGCCCAGCCGGGCGGCGTCCTTATGGAGGCCATGTCGCATTACCAATCGTTGCACTACAACAACGAATACCTGACCAATGCCGCAGCCTTGGCAGCGGCTggccagcgccagcagcagcagcagcagcaacagcaacagcagcaacatccgTCGCTGTCTGAGCCGCCGGGCAGCGTGGGTCAGCCCTATAAGAAGCAGCGCTTGAGCGATGCCAATGTCAGCAACATGAATCACCTGccacaccagcaacagcagcagcagcaacagcagcaacaacagcagcagcagcaacgctcGTCACCCGCTCAGCAACACAACAGTAGGCAGAGCAACCATGAGGCGGAGCAGTCGCGGCGCGTGTTGCACATGTCCGCTGGGTCGGTGCTGACGCCGCTGGCCATGCAGCAGCTCAAGGTAGAAACgttgccacaacaacagcaacagcatcagcaacagcagcaacagcagcagcagcagcagcagcaacagcagctgacgTCGCAGGTGCATGCGGCACGTGGCATGGTGCCGCCGCCAACGGTGTCAGCAGCTAATGCGCAGCTGATCAGCTTCTCCtcgagcagcagcggcaacagcagcaacaacaacagcagcagcagcagttcccaagccgcagtagcagcagctgcagcagcggcggcggcagcagcagccgcaagcAGCACAGAAGCATACCATCCACAGGTTGAGGCCATTTCACCCACGTTGCCCAGCGATAATGCAGAGGAGCGTGGACGCAGCACTGGcggccacagcagcagcagcagcaacaacaacaacaataataacagcagcagtagcagcagcggcagcagcagcagcaacaacaataccagcagcagcagcagcaatagcaacaacaacaacagcgccaAGGAGGATCTGCTTATGCAAATCCAGCGCGTTGACGATGAAATCAAATGCGCCAAGACGGCCATGGAAACGCTGCGCAAGAAGGAGAAGACGCTGCTGGACGAGGCGGCGGCCACAGCGGCGACAGTCAAGCAGCAGAAGGCGGCCGCCGAGCAGGCGGCAGCTGAGAGTGGCAATGAGCGCTACATGGAGCTGGGCTGGCGTGCCCAAATGATGGCTCAGAGTGTCTACGAGGCGAACCGCAAAACGGCCGCCGCACAACATTCCGCGGTGAGTGAGGCGGGCGGCACGAAGGGCACGCCACGCCCCTGGCTGCCGCTCTACAATCAGCCGCTCGACGTGGAGGCCCTGTCGCAGCTGATCAAACGGCATCAGACATTGGTGCGGGCGCCGCTGCTCGTGCACATACGCAAGCTGAAGGCCGATCGCTGGGAGCACAATCAGGGCCTGGTGGAGAAGTACACGAAGGATCAGGCCGATTGGCAGCGACGCTGCGAACGGGCCGAGGGCAGCGCCAAGCGTAAGGCGCGCGAGGCCAAGAATCGTGAGTTCTTCGAGAAGGTCTTCACGGAGCTGCGCAAGCAGCGCGAGGACAAGGAGCGCTTCAATCGTGTCGGCTCGCGCATCAAGTCCGAGGCGGATCTCGAGGAGATCATGGATGGACTGCAGGAGCAGGCGTTGGAGGATAAGAAGATGCGCTCCTATGCCGTCATACCGCCCCTGATGCACGATGCCCGGCAGCGTCGTTGCGCCTACCACAACGAGAACGGACGCATCGAGAACATGATTGTCGTGCACGAGGAGCGCAAGGCCCTGAACTTGTGGACGGCCGGCGAAAAGGAGACGTTCAAAGAGAAATATCTGCAGCATCCGAAGAACTTTGGTGCAATCGCCGCCAGCCTGGACCGCAAGTCGCCGCAGGATTGCGTACGCTATTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGCTACGCAAATCCCGCCAACGCACACGCAGCAGCCGGAATCCGGCCAAGGCGCAGGCCCAGCTGCCGCAGTGCATCATCGATTCGCTGACAACGGGCGTCACGACGCGCCTGCAgcgcgagcagcagcagaagtccGGCAATCGGTCCAGCGCCGTTGCCGAACGTGAACGAGCCGAGCGGGCCGCCGAACGGGAACGCGTCGCCGAGAAAGCAGCAGCGGATGCCGCCAAGGCGGCCGAGTGCGCCGCCGAGAAGGCGAGCGCTGTTAGCAAAGCGGCCGAAGCGGCTGCCGGCAGTGAAAAGGTGGCCAAAAGCGCGAgcattgcagctgcagcagcagcagcagcggcggcagcggcctcatcgtcgtcgtcagcAACAGCTGCGGATAAAACTGATGCTGGCAAGGCGCATGCTGGAGCGAATAAGaatgcaacagctgcagcggcggcagcagctaaaACGGAGATCTCaacgggcagcagcagcgacgccaaAGCCAAAACCGCTGAGGAGGAAGCgccagccacagcagcagcgacaggagcaacagcggcaacggcagccaCAACAAATGCATCggcaaatgttgctgctgaggcagctgccgGCACCggtgctgccgctgctactgctgcgCCCACGTCCAAAGCATCCAAGTCCCAGCCAGGCGACGGCAAGGCAGCCAATGCCGCCAAGGCAGCGGAGCAGGCGGCCGAAACGGACGAGCAGCTGGCCGTCAAGAGCAAGGCAGCGGCTGCCGATGGCTACAGTGCAACTGGTGCCGCATCAGCCAATGCCACGGCTACGGCAGCGCCTGCGGTTAGCGTGGCCATCAATGGCTTTAAGCCTGGCTATCAGAGCGTCGTTATGGCCAATGTTAAGGCACCCGCGCCCTCGTCTGGCATGGACGATGCTGCAACTGGAGCTGCTGCAACAGCGGCTGGTGCTGCAACGTCGACAAATGCAACTGGCGATAAAATCGTGAAGACGTCGTCGactgcggcagcagcagcagcagttggctTTGCCGTGCCCAatgcggcagctgcagcgacGGAGGCGGTGAGCGGCGTGGCAACGCTTACCACGGCCACAACTGCTGGCAACTATTTGGGCCAGAAGCTGAAGGCGGCGCAAGTGGAAGGACTTGGTGCCGGCAATGAGCTGCATGCCGATGTTAGCGATGCCAAGAAGAAACGCTTCGAGCTGGCGCCTGGCGATTCAAAcgtcaacaacaataacaacaacaacaacaacaacagcagcaacaacagcaacatcaaacTGAACGCCAACGATGCGTCCACTCAAATCTCGTCCATTGGCAAAGGCGCAGGCTCCGCCTTAGCGCCCGCCTCCTCGTCTTCATCCTCatcctcgtcgtcgtcctccTCATCGGTGATGTTCATTAGCGCTGCATCGCTGATATCGACAGCTTCGTCGCCGTTGACGACGGCAACGGGCACCGGAACGAGGCCAACGACAACGTCCTCGACGTCAATGGTCACAGATCGAGCGGGCAATTTGCTGAACACCTCCGAGGTTCTGGCATTGGATGCCAAAGCCGAGTTCATTAGGATTTTGCAGACTTGCAAGGACTTTCGTTGA
Protein Sequence
MDQQQYVKSLGHLQSHQQQQQQQQQQQQQQMHHHHHQQQQQHQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPGPGSAAAAAAANSYAKFADAPQHFIQPPAYSIGIAPVANYHRESPYMRIPQLQASVPEFQRAARAATVAAAAAAVGGGKGGPGSGGGGNIGVVSSAAGPGSGSSGGVVQVAGSMAPPGAQPGGVLMEAMSHYQSLHYNNEYLTNAAALAAAGQRQQQQQQQQQQQQHPSLSEPPGSVGQPYKKQRLSDANVSNMNHLPHQQQQQQQQQQQQQQQQRSSPAQQHNSRQSNHEAEQSRRVLHMSAGSVLTPLAMQQLKVETLPQQQQQHQQQQQQQQQQQQQQQLTSQVHAARGMVPPPTVSAANAQLISFSSSSSGNSSNNNSSSSSSQAAVAAAAAAAAAAAAASSTEAYHPQVEAISPTLPSDNAEERGRSTGGHSSSSSNNNNNNNSSSSSSGSSSSNNNTSSSSSNSNNNNSAKEDLLMQIQRVDDEIKCAKTAMETLRKKEKTLLDEAAATAATVKQQKAAAEQAAAESGNERYMELGWRAQMMAQSVYEANRKTAAAQHSAVSEAGGTKGTPRPWLPLYNQPLDVEALSQLIKRHQTLVRAPLLVHIRKLKADRWEHNQGLVEKYTKDQADWQRRCERAEGSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIENMIVVHEERKALNLWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAQLPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAECAAEKASAVSKAAEAAAGSEKVAKSASIAAAAAAAAAAAASSSSSATAADKTDAGKAHAGANKNATAAAAAAAKTEISTGSSSDAKAKTAEEEAPATAAATGATAATAATTNASANVAAEAAAGTGAAAATAAPTSKASKSQPGDGKAANAAKAAEQAAETDEQLAVKSKAAAADGYSATGAASANATATAAPAVSVAINGFKPGYQSVVMANVKAPAPSSGMDDAATGAAATAAGAATSTNATGDKIVKTSSTAAAAAAVGFAVPNAAAAATEAVSGVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHADVSDAKKKRFELAPGDSNVNNNNNNNNNNSSNNSNIKLNANDASTQISSIGKGAGSALAPASSSSSSSSSSSSSSVMFISAASLISTASSPLTTATGTGTRPTTTSSTSMVTDRAGNLLNTSEVLALDAKAEFIRILQTCKDFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00509758;
90% Identity
iTF_00509758;
80% Identity
-