Dnig001862.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nigricruria
Gene Symbol
Mblk-1
Assembly
GCA_037075265.1
Location
JBAMCI010000035.1:9533095-9546485[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-06 0.0023 17.7 0.0 1 36 317 353 317 362 0.88
2 2 1.1e-18 1.9e-15 56.4 0.0 1 43 823 866 823 868 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGAGCAATTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAATAACGAGCGAAGAGACAGAAGACAACAGCGAATACAAGGAGAGCCACTGCAAGCCACTGAGCCAACGCTTAGAGCAGCCCAACGGCCAgccaatcagcagcagcagcagcaacaacagcaacggcttGTTGCAATTTGAAGGCGATTTTGACAACAACCATAATACATCACACGAGGAACGCGACTCCAGTGCAACATCACGTAGCTCCGTCTCACCAACTCCACCGCCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTTAACGCCAAAGGCGAATTGGTGGCCGAAACAAcggccagcaacagcaatagcaacaatacAGCCGTGCATCAGcacgacagcgacagcaactcGAGCGCATCGCTGCACAATAGCAGCGTAactaccaacaacaacaacaacaatagcaagcATAGAGCacgcagcaacaccaacaacaacaacaacatagcCACAACGTCGTCGCCCACAAGTTCCATAGAACTATACAAGCTGCTCACCCAGCAAACAGCCAAGATGACATCAATGGAATCAATGGCCGCCAAGCTGGCCCAATTCACAATGATGGCCGACATCAATTTGATGAACACGCTGGCCAATCAACAACATGCCAACTCCGTAACACCAACTACCTCGGAagtagctgccgctgccgtacCCAGTCCCACACTCAAGGATACTACACTACACAGTCCACACAATGCCGATGCGCCGCTGGACCTAAGCAGCAAGCCATCGCCAAACTCATCGATCAGCGGTGATATCAAGACAGCCAGAGCTTTGTCGGAGTGTGCCACGCCTCTTGGCGCCGCCGGCCGGCAGGCGTACAGCAATGAGGATCTGAATAGCGCGCTGCAGGATGTGCTGGCCAACAAGCTGGGCACACGCAAAGCGCCCAGTCAATACCATGTGCAGCGCACGACGCTGCGCAACAAACTGTGCAAAATGACGCTCGATGGCAAACGTGCGACGCCCGatctacagcagcagcaacaacagcaacagcaacagcagcagcagcagcaactgttgcagcaCGAACTGGAGCTGGACGAGCAGGAAGAGTCCGGCGATGAGGCTGGCGATGGCGATAGCAATGCGTCGGGCTATCAGGAGTTGGCCCATCGCATGGCCGTCAGCGAGCATCTGCGCAAGCTGGGTGACATGTCCGAGCACAATGGCAGCGATCTGGGCGACGAGCACGAGTCGGTGATGTCACCGAAACAGACGCATTCACAGGGCGGCGGCACACCCACTGGCCATATGCCAGGTGCAGCGGCTGGCGGCAAtgttggcgctggcgctggcgctgcgGGCGGCTTGCCCGTGACCATAGATACGAGCGTGCTGCTGCATACACTGATGCTGGCAGCGGGCATTGGGGTGATGCCCAAGCTGGATGAGACGCAGACGCTGGGCGATTTTTTCAAGACGCTGCTGATGGCCAACAGTGGCGGCATTCTGGGCCAGGAGAGCAATGGCAGTGCCACACtcttgcagcagcaacagcagcagcagcagcaacagcaacagcagcaacagcaactcaaTGCTGTGGCTGCCTTTCGTCGTCATCTACCAAAGTCTGAAACGCCAGAGACTAGCTCCTCGCTGGACGCTAATGAGGCGTGCGAGGATCCTATACTGAAGATTCCGTCCTTCAAGGTCAGCGGTGCGACCAGCGTCTCGcccaccaacagcaacaataccaacaccaacaataacaacagcaacaacaacaatagcaacagcagcatcaacaactcAAACAGCAATCGCAATGGGGATCACAGTCCACACTCCGCCTCGCCAATgctggcagcagctgttgccgttgcagccgccagcaacagctatcgcaacagcaacaacagcagcagcctcagcaacAATCTGCTAtcgccaacagcaacatccATACAAAAGATGATGGCCAATACCATACAGCGCAAGATCAACGAGCAGAGCAACCAGGATAATCTCCTGGGCTTGGATAAGCGCAACAATGGCAACACCAGCGGCAGcgaatgcagcagcagcggcggtggcggcggcggcggcggtggtggtggcggtggcagTGGCGGCAACACCAGTAGAAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACGGATACCTCACGCTTTGGCGCCTCGCCCAACCTACTGGCCCAGCAGCATCACAGCCATCTGAGCGCACATCATCATGCACACGCGCATACGCATCCGCACgcgcatcatcagcagcagcaacagcagcagcagctgagcgcACAGGATGCCGCAGCGCTGGCTGCTGGCAAGGGCACTCGGCCGAAGCGCGGTAAGTACCGCAACTATGACAGAGACAGCCTGGTCGAGGCCGTTAAGGCTGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCCGGCAGCTATTACGGTGTGCCCCACTCAACGCTGGAGTACAAGGTGAAGGAGCGACATTTGATGCGACCGCGCAAACGTGAGCCGAAGCCGCAGCCCGATCTGGTCGGACTGACGGGCGCTGCGAACAAGGTGAATGCCAATTTGGTGGGTCTCAATCATCTGGACAAGCTGAAGgcgggcaacaacaacagcagcaacagcaacagcaacaacagcagcagcaatgtcGGCTCGAAGCTGAGCAACGCCTTgaagaacaacagcagcgccgcaagtgcagcagccgctgccacgcccaacgGCCTAAAGCTGCCCATTTTCGATGGCGGACCACAGCTGTCCTTCCAGCCGACGATGTTCTGGGCGCAGCCAAATACCGGCGGCAACTACGGCCTCGACTTGAATCGCAATAACGAATTTCTGAACAACCATCTGGCCGAGGTGATACGCGGCAGCCCGCTGGGCGTGGCGGCCAATCTGAACCATGGCCATGTGCCGAGCGTGCATATGAAGAGCGCCCTGGAGTATGCCGAGAATATGTACGACGGCATCATACGAAAGACTCTCAAGCAGAATGATAGCGATgtcatcatcaacagcagcagcaacaacagcaacagcggcaatgGCACCGGCAACGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCGCTGCCATTTACAAATAATCGCAACAATGATTACATCAATGCCACCTGCTCCAGTTCTGAGTCGAGTGTTAAGCGTCCGGGCAGCCCGCTGGGCGCCTATGCGGATATTAAGCGCGAACGACTTAGCCCCATGCGCAGCACAGCGAGCGCCAGCAGTGACGAAGACCAGGATGCTCATctcaccaccaacaacaacaacaacaataacaacagcgaGCTGGCacacaacaagaacaacaatggcaacggcaatggccgCAGTCGCATGACATCGCGCGACTCGGAAACAGACGCCAGCAGCCTGAAGAGCGAGCAATCGCTCAGCTCGGCAGCGCATCTGCACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAGTATGAGCCAGAGCcgacgacagcaacagcgacgcaATTATCGCCAAACAATTCGATATTGCATGACAAGCTGGCACAGATCAAGGCCGAACAGGCCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQEQLTRNQLNIAEQQPISIITSEETEDNSEYKESHCKPLSQRLEQPNGQPISSSSSNNSNGLLQFEGDFDNNHNTSHEERDSSATSRSSVSPTPPPEPNDWTPFDKCNFCVNGRLLTVNAKGELVAETTASNSNSNNTAVHQHDSDSNSSASLHNSSVTTNNNNNNSKHRARSNTNNNNNIATTSSPTSSIELYKLLTQQTAKMTSMESMAAKLAQFTMMADINLMNTLANQQHANSVTPTTSEVAAAAVPSPTLKDTTLHSPHNADAPLDLSSKPSPNSSISGDIKTARALSECATPLGAAGRQAYSNEDLNSALQDVLANKLGTRKAPSQYHVQRTTLRNKLCKMTLDGKRATPDLQQQQQQQQQQQQQQQLLQHELELDEQEESGDEAGDGDSNASGYQELAHRMAVSEHLRKLGDMSEHNGSDLGDEHESVMSPKQTHSQGGGTPTGHMPGAAAGGNVGAGAGAAGGLPVTIDTSVLLHTLMLAAGIGVMPKLDETQTLGDFFKTLLMANSGGILGQESNGSATLLQQQQQQQQQQQQQQQQLNAVAAFRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGATSVSPTNSNNTNTNNNNSNNNNSNSSINNSNSNRNGDHSPHSASPMLAAAVAVAAASNSYRNSNNSSSLSNNLLSPTATSIQKMMANTIQRKINEQSNQDNLLGLDKRNNGNTSGSECSSSGGGGGGGGGGGGGSGGNTSRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLSAHHHAHAHTHPHAHHQQQQQQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNANLVGLNHLDKLKAGNNNSSNSNSNNSSSNVGSKLSNALKNNSSAASAAAAATPNGLKLPIFDGGPQLSFQPTMFWAQPNTGGNYGLDLNRNNEFLNNHLAEVIRGSPLGVAANLNHGHVPSVHMKSALEYAENMYDGIIRKTLKQNDSDVIINSSSNNSNSGNGTGNGNALLDQLLVKKTPLPFTNNRNNDYINATCSSSESSVKRPGSPLGAYADIKRERLSPMRSTASASSDEDQDAHLTTNNNNNNNNSELAHNKNNNGNGNGRSRMTSRDSETDASSLKSEQSLSSAAHLHKMMDLNGSNSVKYEPEPTTATATQLSPNNSILHDKLAQIKAEQAEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00568172;
90% Identity
iTF_00532294; iTF_00509737; iTF_00502443; iTF_00568172; iTF_00573238; iTF_00476544; iTF_00519840;
80% Identity
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