Dnig007006.1
Basic Information
- Insect
- Drosophila nigricruria
- Gene Symbol
- ct
- Assembly
- GCA_037075265.1
- Location
- JBAMCI010000107.1:17052528-17100084[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.9e-27 6.8e-23 80.6 0.0 3 72 1130 1200 1128 1205 0.95 2 3 6.9e-32 6.7e-28 96.6 0.0 3 77 1619 1694 1617 1696 0.96 3 3 4.2e-31 4.1e-27 94.1 0.0 3 76 1886 1960 1884 1963 0.96
Sequence Information
- Coding Sequence
- ATGCTGCAGAGAGTGAGAAGTGTTGAGTGCTTGCTCTATGCGAGACAGCGCGCTACATTAGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTATCCACAGGCACGcccggcagcaacagcgacagtaACAGCGAGAACAACAACACATCCGAATCagcactagcagcagcagcagcaacagcagcagcaacagcagcggcagcagcagcagcaacatcattgGCCAGCGTCGAAGAGGAAGCCACTGGCAatagcgagagcgagagcgacaAGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTCAGcgccgagcagcagcaacagttgcagagCAGCCTGCAAaacggcgtcggcgtcggcggcgCTTGCTTGAATCCCAAGCTCTTCTTCAATCACGCCCAACAGATGATGATGgaagcggcagcggctgctgcagcggcggcccgagcagcagcagcggcggcccagcagcaacagcaacagcaatcgcCAATGCATTCGCCAATCGCGGCAACAGCTATAAgcacagcgacaacagcaacagcagctgccacagcagcagcagcagcagccacacaaCAGCAATCAGCACGAGATATTGCTGAGCCCATTgccagcagcaattgcaacgATGACGATGAGGACGATGATGAGGAGGATGCATCGATGCAATCGAATGTGGCGCATGCCGATGGTGATCTAGACGACGATGATATGGAGCTGGAGCCGGAGCATGTTGCTGATACGGGCAACATTGCTGCCGTTGAGCCAACATTGGCAAGAACTGAAAATGTAGCCGATGCGAATGCGAACGATGATAACGATGATGAGGGCGATGATCGAGATGTCGATGCCGATGTGCCGGCTGATGAGCAGCAGGATGAACTAGAAGCTAgtttaaacaacaacaacaacaatgccgaTAGCAACATTAGCTGTAGTcgaaagaacaacaacaacaacaacaacagtgaaACGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGATGACGATTGCACCAACAACAATACTAAcaccaataacaacaacaacaacagcaacagcaatgaaaAGCGCAAGAAGCGcaacgccagcaacaacaacaataacaacaacaacaacaatcagccCGCTGTACTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCCTTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGCTTGGAGGCCCGCTTGGATAAGCAGCAGATAAATGAGGCGCTGGCCGAGGCTACGGCATTGGCTGCCGCTGTTAATGCCGCTgcgacaaacaacaacaacaacaataacaacaatagcaacagcaacaacaacaatagcagcagcaacaataacaacaacaacaacaacaatcacagtagccagagcagcgacAATAACAATGTCGTATTCAAGACAACTGATCTAACATCGACCCATCGGCACaacgacgatgatgacgatgacgatgacaatGATCGTGATAATGAGCTGCGCGATGCCGAcggcgatgatgatgacgacctGCACATGACCaacagcgagcagcagcagcagcagcaacagcagcaacattcaGCTTTAGTCAATAATCGCCACGACGATGAGCAGGACAAGGACGATGCCGAGGACCACGATGCCGAAATGTCGaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCATTGGACTTGAATGTGCTCAGTCCACAGTCGGCCATTGCCACAGCCGCCGCggccgcagcagccgctgcctgTGCCAACGATCCCAACAAATTCCAAGCCCTGCTACTGGAGCGGACCAAAGCCTTGGCCGCCGAGGCGCTCAAGAACGGCAGCAGCGATGCCGTTAGCGATGAAatgccgcaacaacaacaagccgtAGACGTAGCAACAACAGTTGTAGAAGaagatgcagcagcagcagcagtagcaccagtagcagcagcagcagcagcagccgccgcaacagcagcagccgcagcagcagcagcagcagcagcagttgccaaGCCAGATTTGAACAAAACTGGAACGAATGAGAATGAGACATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATCTTAGACACAGACGAGGCTCCAGCTCCAGTCCAAACGCTAGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAAcgagcacagcagcagcagcagcagcagcagcaactgcagcaccagcaacaacagcagcaacagcagcagcagctgcagctgcaactgggAGCAAAACGCCAACAATTTATCAAAATGCCAATGTggtgcagcagcaattgttgcccccaccgccaccgccacagcagcagcagcaacaacaacaacaacaacagcaacactatcaacaacaacaacaacaacagcagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACCACCaactccagcagcagcaacagcagcagcagcaacagccacagctgcagcagcagcaacttctACACAatagcagcaatagcagcaacagcagcattgcCGGCAACGATCCACTGAATCATCACCATCATGCACACCACCATGGCCATGCGCATGGCCAACTGTTGCATACGGCTCACCATTTGCATCATGGCGCCGATTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAacggcaacaagtcgctgttgcAGGCAGCGGCCGCTGCCAATgtggctgctgccgccgttgccgttgccgaggacaacaacaacagtctgACCCCCAATGCGAACGCTGCTGTGGCCGCAGCAGCTATGGCTGCTCATGCCCAGCATGCCGCCGCCTTGGGTGCACCCAGCTTTCTGCCCAATCTGCCCAGCCTGCCGGCTTTCCAGTTTGCGGCTGCCGCAGCCGCTGGCCAGGAAGCGCGTGCGCATTTCCGCTTCGCGGACGCCGAGCTGCAATTGCAGCCGGGCGTTTCGATGGCGGGTCGATTGGGTGAATCGCTGATACCCAAAGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCGCTCGACACACTACACATCTCGCGCCGCGTTCGCGAGCTGCTCTCCGTGCACAACATCGGCCAGCGTCTGTTTGCCAAATACATATTGGGGCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGaTTCTGGCTTGCCTCAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTCgccgcccagcagcagcagcagcagcaacaggagcatCAGCGTCGTCATGCCAGCGACGATACGCACAGCAACGATGACAGCAAATCGCCGCCACAGAGCTGCAGCTCGCCCTTCTACAAGGTGGAGCATCAgatcaagcagcagcagcagcaacagcagcagcagcagcagctgcacgtCTCTGACCATGCGCAGCGGGAGCAACGtgaagctgctgccgccgccgccgccgttgccgtccaccagcagcagcagcagcgtgagcagcGCGAACAGCGCGAAGCGGTGCAGcgtgagcaacagcaacgcttGCGTCACGAAGATCTCGCCCAGGACAAAATGGCGCGTCTCTATCAGGAGCTAATGGCGCGCACACCGCGAGAAGCAGCCTTCCCTAGCTTTTTGTTGTCGCCCTTCTTTAGCGGCGCCGCTGGCATGCCTGGAGCAGCCGCCAATCCATTCCCCGCCGCTATGGCCGCCGATGAGAATATGCGTCACGCGTTCGAGCGTGAGATTGTgaagctgcaacagcagcagcaacagcaacagcaacaggcgcAGGCCGCCAACTTTCCCAACTTTTCCAGTTTGATggcactgcagcagcaggtgcTGAATGGCGCGCAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTAAACGGACAGCGTTCGTCGCACGATCAgcacagcggcagcagcagctccaagGATGGCGAACGCGGCGATGACGGAGATCGCAGCTTTCCCGCTCTGCCACACGCACGCAAATCCGATGGCGGCAACACACCCGCACCGCCCGCACCGCCAGCCGTCAATGccgccggcagcagcagcagcaatccgATTGCCGGCAGCGTCGCCGTTGCCAGCGGCCATGGCAGCAACTCGGCAGCGCCCAGTCCATTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAGCCAGGGCGAGGAGTTTGCGGCGACAGCGAGTCCGTTGCAGCGCATGGCTTCCATAACCAATTCGCTGATCACACAGCCGCCCGTGACACCACACCACTCTCAGCCACAGCGACCCACTAAGGCGGTGCTGCCGCCCATCACACAACAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGACATTGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCCCAGCGGCTGTTCGGTGAGTCCGTGCTGGGCCTGTCACAGGGTTCAGTCTCTGATTTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCGTTCATACGCATGAAAATGTTTCTGGAGGACGAGAATGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTAATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCCCAAGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCCCAGGCACAGCACATCATGCAGCAGATGCAGGCAGCGGCTGCCATGTCCGCGGccatgcagcaacagcaggcagCGGCCGCCCAAGCGGCTGCCGTGCagcaggcccaggcccaggcccaggcacAGCAGagccatcagcagcagcaacagcagcaggcacagCAGCAGGCCCAACAGCTGCTCCATCATCAGAATATGCTATTGACCTCGCCCGGTCTGCCGCCCCAGCATGCAATCAGCTTGCCAGCGGCGAGCACGCCCAGCGGCCAGGCTGGCGGTAATCCGACTGCCGTTGCGACGCCCGGCAGCAACGAGAAGAAGCCGATGATGATGCCGGTGCATGGTGGAGCGCATGCGCCGAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACTGTTTATGAGATGGCCGCGTTGACACAGGATCTGGACACGCACGATATAACCACCAAGATTAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGACTGTCGCAGGGCTCCGTATCGGAGCTGCTGAGTAAGCCGAAGCCCTGGCACATGCTCTCCATCAAGGGTCGCGAGCCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAACGACGTCGCAGCACTGGACCCAATCAGCAGGACAACAGCAGTGACACGTCCAGCAATGATACGAACGATTTCTATACGAGCAGCCCGGGTCCCGGCTCGGTGGGTTCGTCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTGCTTTTCTCCGAGGAGCAAAAGGAGGCTCTGCGCTTGGCCTTTGCCCTGGATCCGTATCCAAATGTGGGCACCATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATactgctgcagcagcgtcTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGAGTGGTGCGCCCATACCCTACCCACCGTACTTTGCCGCCGCCGCTCTGCTCGGCCGCAGCTTGGCGGGCATTCCAGGcgctgcagcggctgctggtgcagcggcagctgcggccGCCGCCGTCGGCGCCGCTGGCGGCGATGAGCTCCAAGCGCTCAATCAGGCCTTCAAGGAGCAGATGAGCGGACTGGACCTGTCCATGCCGACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTGGAGCTGGATGCCAGCGGACACAATATGAGCGACAACGAGTCCATCGAGGGTGGCCACGAGCCCGAGAACACTCCCATATCCGAGTACGAGAAAGCGCTGCAGAAGTCGGCGCTCGCCTCAGCCGCTGCTGGCTACTTGAACAATGCGGTGCGCAGCTCGCGTCGCAAGCCCGCTGCCCCACAGTGGGTCAATCCGGCTGGCGCCAGTACGCCCAATGCGGCGGGCGCTGCTATTGCAGCCAACGACAACAGCGGCAGCGAGCGCATCATCAACGGCGTCTGCATTATGCAGGCCTCCGACTATGGACGCGACGAGGGCGACAGTGTCAAGGGCGGCGACTCGAATGCCGATGCCGAGCACGATGATCATGCGCACCTGGAGATTGAGCAGCGTTTCATGGAGCCGGAGGTGCGCATCAAGCAGGAggaggacgacgacgatgagcagtcctcgcagcagcagcagcagcaacagcagctggacGATGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGTGTGCGACGACTCAGCAGCAATGGCGATGCCGATGAGCATTGCGCCGCCGTGCAGCAGgcgacggcagcggcagcggcagcagcagcggcagcagcagcagcagccgtagcagcagcagcaactgcgacgccagcggcagcagcagcagcgtggaACTACTAA
- Protein Sequence
- MLQRVRSVECLLYARQRATLAEKEVNTLKEQLSTGTPGSNSDSNSENNNTSESALAAAAATAAATAAAAAAATSLASVEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGVGGACLNPKLFFNHAQQMMMEAAAAAAAAARAAAAAAQQQQQQQSPMHSPIAATAISTATTATAAATAAAAAATQQQSARDIAEPIASSNCNDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADTGNIAAVEPTLARTENVADANANDDNDDEGDDRDVDADVPADEQQDELEASLNNNNNNADSNISCSRKNNNNNNNSETQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNSNSNEKRKKRNASNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNSNNNNSSSNNNNNNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDDDDDNDRDNELRDADGDDDDDLHMTNSEQQQQQQQQQHSALVNNRHDDEQDKDDAEDHDAEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSSDAVSDEMPQQQQAVDVATTVVEEDAAAAAVAPVAAAAAAAAATAAAAAAAAAAAVAKPDLNKTGTNENETLAEANLQPKIEILDTDEAPAPVQTLEEQLVNSYWRRGFETSTAAAAAAAATAAPATTAATAAAAAAATGSKTPTIYQNANVVQQQLLPPPPPPQQQQQQQQQQQQHYQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQQQQQQPQLQQQQLLHNSSNSSNSSIAGNDPLNHHHHAHHHGHAHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQLHVSDHAQREQREAAAAAAAVAVHQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQAQAANFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSHDQHSGSSSSKDGERGDDGDRSFPALPHARKSDGGNTPAPPAPPAVNAAGSSSSNPIAGSVAVASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQQSHQQQQQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGQAGGNPTAVATPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPNAAGAAIAANDNSGSERIINGVCIMQASDYGRDEGDSVKGGDSNADAEHDDHAHLEIEQRFMEPEVRIKQEEDDDDEQSSQQQQQQQQLDDESAEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAVQQATAAAAAAAAAAAAAAVAAAATATPAAAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00476522;
- 80% Identity
- iTF_00559388;