Dnig008898.3
Basic Information
- Insect
- Drosophila nigricruria
- Gene Symbol
- kn
- Assembly
- GCA_037075265.1
- Location
- JBAMCI010000131.1:9673957-9712945[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6e-49 3e-45 154.7 0.3 42 146 200 304 165 310 0.91 2 3 9.6e-177 6.3e-173 576.3 0.0 135 384 348 626 343 629 0.99 3 3 2.9e-06 0.019 13.4 14.9 424 518 633 726 626 747 0.58
Sequence Information
- Coding Sequence
- ATGGACTCTGCAGAAGAGTCGGAGACACCGATGCCGCTGTGCCAATTCCAGCGTCCCACAACAGCAGCGCCATCGCCAACAACAGCATTCACAACGGCTGCCACAATTGCCCCCACACCTGCCGCGAGCAACTATACAAAGGTGAACGACTATCCGTACGCTGATCTccatcagcatcagcaccaTCACTTCGCTAGCACAGCGCCCCTGACCAGCGCCGAGAGCTTCAAGCTGCGCTCCGAGGAGCCGGTGCCGGGCTTCAGCTCGGCCTCGCCGTGGCCCACTCTGGAGCTGGGCATGGAATGGGGACGCAAACTATATCCCACCGCGGGCCCCCGATCCGCTGGCGGTTTGATGTTCAGCCTGCCACCCTCAGCGGCGGACATGAACCAGCCGCGCGGACCGATGACATCTCTAAAAGAGGAGCCGCTGGGCGGACGCTGGGCCATGCAGCCAGTCGTCGATCAGACCAACAACACAGGTGGCCATAGCAGCAATACGAGGCATTTGCATCTGCTGCACGACGACAATCTGCTGCAGGATCACAATCACAATCAAACACTGAACAACACAAACATTAAGATAATGCGCTGTGATGTGAGCCTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGCGCAAATCGAATTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCCGGGCAGCCCATCGAGATAGAGAGAACAGCGTTCATTGGCTTCATCGAAAAGGACTCCGAATCTGATGCCACAAAGACCAACAATGGCATTCAGTATCGACTGCAGTTGCTCTACGCGAATGGTGCCAGACAGGAACAGGACATATTTGTGAGGCTAATCGATTCAGTTACCAAAGCGcagcagcagcaacagccgcaggagcaggagcaggaggtgCGGTATCACGACATTCAGGATGTGTACGGCTCAATTGGTGCGGCGTTCGCTTCATTTGCGCTCATATTTCATAGCGCGTTCGCGTTGTACATGTCCTGGCCTGGCCCGGGTGCTCAGCCTGGTTTGGCCATCATCTACGAGGGCCAGGATAAAAATCCGGAGATGTGCCGTGTCCTGCTGACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGATCCCGTCATTATTGATCGATTTTTCCTGAAGTTCTTCTTGAAGTGCAATCAGAATTGTCTCAAAAATGCTGGCAACCCACGGGACATGAGAAGATTTCAGGTTGTAATCGCCACCCAAGTGGCCGTTGATAGAGAACTGCTGGCCATCTCGGACAATATGTTCGTGCACAATAACTCGAAGCACGGACGCCGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTATCCACCTTTGCCCGTGGCCACGCCCTGCATTAAGGCGATATCACCCAGCGAGGGCTGGACCACAGGTGGCGCCACAGTCATCATTGTGGGCGACAATTTCTTTGACGGCCTCCAAGTGGTCTTTGGCACAATGCTGGTCTGGAGCGAGCTGATCACGTCGCATGCGATAAGGGTGCAGACCCCGCCGCGACACATACCCGGTGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTTTGCAAAGGCTCGCCCGGACGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACAATCGACTACGGCTTCCAGCGACTGCAGAAGCTCATACCCAGGCATCCCGGCGATCCGGAGAAGCTGCAGAAGGAAATCATACTTAAACGCGCCGCAGATCTCGTCGAGGCACTCTACTCCATGCCCAGCAGATCGCCCGGTGGCTCCACCAGCTTCAACTCATACGCTGGCCAGCTGGCGGTTAGCGTGCAGGATGGCAGCGGTCAGTGGACCGAGGATGACTATCAGCGCGCCCAATCGAGCAGCGTCAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCAACCCCACACAGCTCGGGTGGTTCATATGGCGCCACAGCAACCACCGCTGCAGTTGCAGCCACCGCGAATGGCTATGCGCCCGCACCGAACATGGGCACACTTTCCTCATCGCCAGGCAGCGTCTTCAATTCAACTTCAATGTCCGTGTCAACGCCTTGGCATTCGGCTCTAGTGCAGCATCATCATGCCACCGCCGCTGTCGCCCACCCGCATCActatccgcatccgcatcagcCGTGGCACAATCCCGCCGTGtcagcagcgactgcgacggccGTTTAA
- Protein Sequence
- MDSAEESETPMPLCQFQRPTTAAPSPTTAFTTAATIAPTPAASNYTKVNDYPYADLHQHQHHHFASTAPLTSAESFKLRSEEPVPGFSSASPWPTLELGMEWGRKLYPTAGPRSAGGLMFSLPPSAADMNQPRGPMTSLKEEPLGGRWAMQPVVDQTNNTGGHSSNTRHLHLLHDDNLLQDHNHNQTLNNTNIKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAQQQQQPQEQEQEVRYHDIQDVYGSIGAAFASFALIFHSAFALYMSWPGPGAQPGLAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVAVDRELLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHATAAVAHPHHYPHPHQPWHNPAVSAATATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- -
- 80% Identity
- -