Dneu004648.1
Basic Information
- Insect
- Drosophila neutralis
- Gene Symbol
- snpc-4
- Assembly
- GCA_035044385.1
- Location
- JAWNME010000219.1:289752-292091[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 9.3 1e+04 -3.1 0.1 22 45 204 229 204 230 0.67 2 5 3.4e-13 3.6e-10 39.9 0.1 1 41 236 277 236 282 0.92 3 5 2.2e-06 0.0024 18.1 0.0 2 45 292 339 291 340 0.91 4 5 6.1e-09 6.6e-06 26.2 0.0 2 46 347 392 346 392 0.93 5 5 4.3e-09 4.6e-06 26.8 0.0 3 41 400 439 398 439 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATGTGAATAGTCTGAAGCagaaataccaacaacaattgcaagaAATAACAACACTGCTGTCTACCACAGCTGAAAGCGATGCAGATCCCTTGAAACTGAATCAGGACATGCAGAAGCGTCTCGAACAGATGCGTGTACGTATTCTGGATCTGCTGCGGATAGTCCGAGCTCGTTATAAATTTAACGAGGACCTACTTATAAACCGCATGAAGAAGCGGTCTAAGAACGAAGGAGCAGCAGGCACCAAGGAAGTCGTCGGAATGAGTGGAGCTGTGCTGCGCGGTGGAACGTTTCGATTTAAGggtaatttatattttcgcGATGTGAATGGACGAAGTTGTCCCAACAATGAGGACTACGAGCGGCGCTGCAGCAATGAAATGTTCCCCACCGATTTTGATATGCGCTCCAAGCACGTCTGGACGGTGATGGACAGGAAAAACATCGTGATGGGTATTAAGAAGCAGCTGTTGGATCATGCCGAGTACACAGCGACAGCAGTCAAAACCGTTGACAGGAAGGGGAGCAAGCGTAAGGCCATCGATCTTCACGAGCAATCGCTGGCTAATTTGCTGAAACTGACCGACAGCAGCTTCAGCATTGACTGGAATCAGATTAGCACACTCGATCTGCAGCATCGTCATTCATCGTACAGCTGTGAGGCCATGTGGTTAGTGTATTTGCAGCCGCAACTTAAACGCGACGAGTGGACTGCCGATGAGGATCAAATTTTGCTAGCGGCCGCCAAGGAACACAAGATGCAAAATTGGGAAGCCATTGCGGCTAAGATGGATCGGCGAACCGACTATCAGTGCTTTGTGCGCATGCAGACAGCTCTGCGCAGTCAATCGGAGCCAACGAGCTTCATGAAATGGACTCAAAATGATAACGAACGCTTGCGAGCAATTGTTTTAAAGAATACGGTTAACAGCGTTGTTAACTGGTCTAAAGTGGCCGAACACTTCCCGAACAAATCGCGATCCACAATAATTGGTCGGTATTTGTATGTCCTGCATCCCAGCATCAGTCACGAACCCTTCACCCAAAAAGAGGATATGATGCTGTTTGCTGCCGTTGAGGAATACGATGGCAAGTTTAATTGCATTCCGCGTACGCTCTTCCCCAATCGCTCGACGGCCCAGCTGCGCACGCGCTATAATAATGTGCTGGTGCAGCGACATAAGACTGATTCCTGGTCGGTGAATGATGATATGAAACTGATTGCTTTCGTTGAAAAACATGGCAACTCGCAGTGGGTGAATTGTGCCAATTATTTGGGCAATCACTCGCGCACCAGCTGTCGCACACGCTCTATAGTCATTCAGCGTTTTATGGGGCAGCATCCAAATGCAAAGGTGGAGGATATTCCACGTCGCAAGGTGCTGAAAGGTGCTTCAATTACCGCCGACAATTGGGATCAACGTCTCCGTCAGTTGCTAGCCGATCCGGAGTCGCTGCACAATAGCCCATCGGACCGGAAGTCACAAACCAAGTCATTACGTCGCAAGGTCTCCGCCACCTATAAGTACTTCATGTATGCCTATAATCTCAATCTACGATCGCCTGCGGCGCCAATACCACTGCCCCTGGACGAACGTAACCTGCACACCATGGCTAATGCGCTGCGCTTCCAGCCACCCGCAAATATGATCAATATAATCCAAAGTGCTTGTCTGCCCAGTCAGCTGTGCTGCTTCTTTAACAAAGTGCTGTGGGAATTGCCTGTGCGCGAAGGAAGTGAATCACCTacggagttgctgctgccgaatTGGTCAACAATGATGGGCTTTCGGGCCATATGCATATTTTCAGCGCAATGTAGGAATGATGCCGATTCTGCGACTGAATTGAAACCAACAATCAGCTACGATGAATCTCAGCCAGCGGTTCAGCTGTTGGGGCTACGCATACGGAATCTTTTCTTTCGCACTGTCCAGGTGAGCCGACTGAAGACAACGTCGTTCGAGGCGCTGCCGGCTGAATTGATAAAACTGTCACGTCCAACTATAAATGTTCACTTGTCAGAGACCATACCGCAAAGGTCACTAATGCAGAAACGGTCGACTAGGCAGCAGACACGGCCAGGCATAGACTATGTCAATGTCAACGAAATAGCggaaaagcaaattaaaagtttgGGTCAGATGAAACCTGGACCAATCAAACTTGAGGAAGAAATCCAATTACATTCAGATTAA
- Protein Sequence
- MCDVNSLKQKYQQQLQEITTLLSTTAESDADPLKLNQDMQKRLEQMRVRILDLLRIVRARYKFNEDLLINRMKKRSKNEGAAGTKEVVGMSGAVLRGGTFRFKGNLYFRDVNGRSCPNNEDYERRCSNEMFPTDFDMRSKHVWTVMDRKNIVMGIKKQLLDHAEYTATAVKTVDRKGSKRKAIDLHEQSLANLLKLTDSSFSIDWNQISTLDLQHRHSSYSCEAMWLVYLQPQLKRDEWTADEDQILLAAAKEHKMQNWEAIAAKMDRRTDYQCFVRMQTALRSQSEPTSFMKWTQNDNERLRAIVLKNTVNSVVNWSKVAEHFPNKSRSTIIGRYLYVLHPSISHEPFTQKEDMMLFAAVEEYDGKFNCIPRTLFPNRSTAQLRTRYNNVLVQRHKTDSWSVNDDMKLIAFVEKHGNSQWVNCANYLGNHSRTSCRTRSIVIQRFMGQHPNAKVEDIPRRKVLKGASITADNWDQRLRQLLADPESLHNSPSDRKSQTKSLRRKVSATYKYFMYAYNLNLRSPAAPIPLPLDERNLHTMANALRFQPPANMINIIQSACLPSQLCCFFNKVLWELPVREGSESPTELLLPNWSTMMGFRAICIFSAQCRNDADSATELKPTISYDESQPAVQLLGLRIRNLFFRTVQVSRLKTTSFEALPAELIKLSRPTINVHLSETIPQRSLMQKRSTRQQTRPGIDYVNVNEIAEKQIKSLGQMKPGPIKLEEEIQLHSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527975;
- 90% Identity
- iTF_00482159;
- 80% Identity
- -