Basic Information

Insect: Drosophila neutralis
Gene Symbol: lov
Assembly: GCA_035044385.1
Location: JAWNME010000165.1:4776555-4788190[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-18 2.2e-15 56.2 0.0 1 44 894 937 894 938 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-18	2.2e-15	56.2	0.0	1	44	894	937	894	938	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAATTGACGTCGCTGCCGTCGCTGGCGCTGCACATGAACGAATACGGCCGCCAGGTGGCGCCagcgctgccgctgccgctacTAGCGAagccgccaacaacaatggcaacaacaactggcctGGGCATCGATCTACATCATCCACATCCTCATCCCCAGTcccatcctcatcatcatcatcagcatacgcatcagcagcagcaacagttccaACAGTTGCCACTGCCTCTTCTGCCtgcgtcgcagtcgctgcaTGGCAGCCACGCCCATGCCACACCGCCAACAACGCCGCCCACGCCGCCAGCGCAGCCGCTGAACATGAGCcaaactgcaacggcaacagcaacgacgacaacagttgctgctgttgctgctgcaacaacaacaacaacagttgcaccCGATGCTGcgaccgcaacaacaacagctgcagccgcaacagcaacatgtgCAACTGTTTCAACGCCACCTGCCACACCTGCCACGTCTGCACCCACTCAACCCGCGCAGGACCATTACAGTCTCCGCTGGAACAATCATCAGAATCACATCCTGCGCGCCTTCGACGCACTGCTCCAAACCAAGACCCTCGTGGATGTGACTCTCGTCTGTGCCGAGACCTCGATAAGGGCACACAAAATGGTCCTCTCCGCCTGTTCCCCATTCTTTCAGCGCGTCTTTGCTGAGACGCCGTGCAAGCATCCTGTCATCGTCCTGAAGGACTTTCGTGGCTGGGTTGTTCAGGCAATTGTGGATTTCATGTATCGCGGCGAGATTAGTGTGCCCCAGCAGCGTCTGCAGACACTCATCCAGGCGGGGGAATCGCTGCAGGTGCGCGGCTTGGTGGAGAGTTCGGTGCCGGAACATACACCAACCCCGGCAGCTTCCCCGGATGACTTCAATCTGTTGGACGCTTCGCTGCTGGCGGCTAGCTTTGAGGATGAATCGCCGTCGATGGTTATGAGACCCTCCACGGGCAAGCTGATAATGCCGACGCGTCTGTTTGCTGGCGCTGGCCATGCGCCGATGGCGCTCAGCCTACGCCGTAAGCGCGAGCAGGACAGCGAACGTGAGCCGGAAAGCGATCAGGAGCTGGGCAGTGGCTCACCCATGCCGAGACGCAAGCAGGCGCGTCCGCGGCGACGTTCCGGCGATGACTTTGCGCTGAGCAAGCCGGAGACGTCCTCGGATACGTTGCCACTGCAAACTGTGATCAAGGAGGAACGGGAGCAGGATCAGGAGCAGGATTCGAGTGATAAGCAGCGAAATGAAGATGAGGCAATGGAACAGGCtgagcagcagtcgcagcaaatCCACGAcaacgaggaggaggagcaggaagaggaggagggtggtgcagctgcagctgctggtgaGATGGAGCACGCGCTGCCCCTCATCACGTCCAGCAATCAGCTGGAGCTGGACGAGGAGGAGTTGCAGGAGGATGAAGATGaacgagagcagcagcaagatcGAGCGGAAAGCCAACACCGACACGATCCGGatgagcaggaggaggagcaggaggaggaggaggagcaggaggacgaggaggaggaggaagaggaggaacAGGACATTGAGGAGCTGATACACACGACGAATGAGCTGCGTCGTCAGgcagctgttgccgctgccaatGCGGCTGCCATGTCGCCCTGTCCCAGCGACGGGCCTGAGGATCTGTGCACCACCAAGAAGGACAAGGACTCGCACTGCTCCTCCGATAacgagagcaacaacaacaacaacaacagcagcaagttgCAGGACAACAATCAGCGCATCATGTTGTCCTTGAAGGACATTCGCCAATTGAATGCCAAGCCGAATGCAAGCTCCACGCCCAACAGCTGTGCCCATGGCAACAACGGCCTGTTGTCCTTTCccccgccgccaccgccacctgGCCTACGTCCGCACGACAGTCCGCCCTGTCACATGGAGGCGCTGGAGGCGCAGATGCATGCggcggccgctgctgctgccgctgctgccgccgctgctggtgTCGGGGAGAATCCCTTCCATCACATGGAACATCAAATGGAAATGTCGCTggccgccgcagcagccgcagcagcaatgcaCCGGGAGCGAGAGCGTGATCCGCGCGAGACACGCGAGCAGGCGCTGCAGCGGGAGCACAACGCGTTCGCCAGCAATCTGCTCGGACCGATGGGTCTGCCACCGTTTCATGGACACAATGGGGGCGTGGGGCATGCGCCGCACGAGCGGCTCGAGGAGAGCATGAATCGGCTGAGCAAGGAGTTTAGCAAGGAGTTTGGCAAGGATTTCGGCAAGGATTTTAGCAAAGATTTTTGCAAAGAATTTGGGCCCACGTCGCCAATGAGTTTGCAGGGCCACTATAATCCGCAGGATGGACCGCATCCGCAGTCGCCGCTGCCCTTTCCCGGCATGTCCTCGGCGTTGACGCTGACGCCGCCGCACATGTTTGGCCTGGACTCGCCGCTTGGTTTATTTCCGCCTGGCATTGATCCTGGGAAGCTTTACAATCCGCTAATGGAAATGAGCGATCCTCGCGATATGCCCGGCGGACCGCCGCCGTTTCTCAAAAAGAAAATGCCACGGCCGAAGGGACAACATTCGGCGCCACGAGGAGGACCGCCCCGTTCCTGGACAAATACCGAGTTGACGGAGGCACTGCAGCACGTGTGGAACAAGAAGATGACCACTTCGCAGGCATCCCGCATCTTTGGCATACCCTACAACTCGCTGCTGATGTATGTGCGGGGCAAGTATGGGAAGAGTCTGAAGCTGGAGCAGTTGCGCAAGGATTGCATCAGTGGGCCGCCCATCGAGATGCTGCAAATGGGCATCAGCGGAGGTGGCGGGGGCGGCGGTTCCTCCAAAAGCGAGAAAAAGGAGCGCAAGGAGAAGGACAAGGAGAAGcacgcagcagctgccaacaactccagtggcagcaacaacaacaacagcagcaacaacagcaacaaccacaactcgTCCGGTCATACGAATCCAGCGCAGCTGTCCCATCATCCCAGCGACTTGGGTGCACTGGGTCCACTTGATCTGGAGCTGGGCTTGCCGTTGGGTCCGCCCATTGGGCCGCGCAGTGGCAGCTCTGAGCCAGATTTGCTGGGCGGACCCGGCGCAGGACTCTTTAATCCGTTCAATCCGCAGGGTTTCTATCCGGATTTCGCTGGCGGTTTTCCGGGTCTACCACTGAGCATGCTGAATCTATTGCCGCCGGCGGAGCGGCATCATGCCGCTGTTGCCATGCATCATTTGGGCGTTAGCATGGATGAGGATTGCAAGTCAGTGGGCTCCAAGCAGTCCTCGTCGCTGGACGATGAGTACACTCTCTCCCTCGACCAACGGCGGCACAGTGAGCTCTCCAGCAATGGAACGGCGACGCTAGCCCAGGCAGGTGCGGCGGCGGCGCAGGATTGA
Protein Sequence: MLKDAEELIKRCKLTSLPSLALHMNEYGRQVAPALPLPLLAKPPTTMATTTGLGIDLHHPHPHPQSHPHHHHQHTHQQQQQFQQLPLPLLPASQSLHGSHAHATPPTTPPTPPAQPLNMSQTATATATTTTVAAVAAATTTTTVAPDAATATTTAAAATATCATVSTPPATPATSAPTQPAQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLAASFEDESPSMVMRPSTGKLIMPTRLFAGAGHAPMALSLRRKREQDSEREPESDQELGSGSPMPRRKQARPRRRSGDDFALSKPETSSDTLPLQTVIKEEREQDQEQDSSDKQRNEDEAMEQAEQQSQQIHDNEEEEQEEEEGGAAAAAGEMEHALPLITSSNQLELDEEELQEDEDEREQQQDRAESQHRHDPDEQEEEQEEEEEQEDEEEEEEEEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDSHCSSDNESNNNNNNSSKLQDNNQRIMLSLKDIRQLNAKPNASSTPNSCAHGNNGLLSFPPPPPPPGLRPHDSPPCHMEALEAQMHAAAAAAAAAAAAAGVGENPFHHMEHQMEMSLAAAAAAAAMHRERERDPRETREQALQREHNAFASNLLGPMGLPPFHGHNGGVGHAPHERLEESMNRLSKEFSKEFGKDFGKDFSKDFCKEFGPTSPMSLQGHYNPQDGPHPQSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGGSSKSEKKERKEKDKEKHAAAANNSSGSNNNNSSNNSNNHNSSGHTNPAQLSHHPSDLGALGPLDLELGLPLGPPIGPRSGSSEPDLLGGPGAGLFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDEYTLSLDQRRHSELSSNGTATLAQAGAAAAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00498965;
90% Identity: iTF_00528147;
80% Identity: iTF_00558808;