Dneu004055.1
Basic Information
- Insect
- Drosophila neutralis
- Gene Symbol
- kn_1
- Assembly
- GCA_035044385.1
- Location
- JAWNME010000165.1:8905196-8937518[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-232 1.1e-228 760.4 0.0 39 384 121 495 115 499 0.99 2 2 3.2e-06 0.021 13.3 15.8 424 518 502 595 495 617 0.53
Sequence Information
- Coding Sequence
- ATGGGATTAAGTCCCATTGAAATGGCATTGGCCAATCAGCGACGCGCACACAATGACATTTTGTTCCGATTCCCAAATGGTTTCCCATTCGCTTTTTGCACAGCGCCCCTGACCAGCACCGAAAGCTTCAAGCTGCGCTCCGAGGAGCCGGTGCCGGGCTTCAGCTCGGCCTCGCCGTGGCCAACGCTCGAGCTGGGCATGGAATGGGGCAGGAAACTGTATCCCACTGCGGGACCCCGATCGGCGGGCGGATTAATGTTCACATTGCCACCAACGGCGGCGGACATGAATCAGCCGCGGGGACCAATGACAGCCATGAAGGATGAACCACTCAGCGGACGCTGGGCAATGCAGCCAGTTGTCGATCAGACCAATTTGGGCATTGGACGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCaaatttctttcattttgtgaTTGCACTCTACGATCGGTCGGGGCAGCCCATCGAGATCGAGAGGACGGCCTTCATTGGGTTCATCGAGAAGGATTCAGAGTCGGATTCGACGAAGACAAACAATGGCATCCAGTATCGATTGCAATTGCTCTACGCCAACGGCGCGCGACAGGAGCAGGATATATTTGTCAGACTCATCGATTCCGTAACCAAAGCGGCCATCATCTACGAGGGCCAGGACAAGAATCCCGAGATGTGCCGTGTCCTCTTGACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCGTCGGACCCCGTCATCATTGATCGCTTTTTTCTCAAATTCTTCTTGAAGTGCAATCAAAACTGCCTCAAGAATGCTGGCAATCCGCGGGACATGAGAAGATTTCAGGTTGTCATATCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCCATCTCGGATAACATGTTCGTGCACAATAATTCCAAGCATGGCAGACGCGCTAAGCGATTGGACACCACGGAAGGTACAGGCAACTCATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCCGTGGCCACGCCCTGTATTAAGGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACCGTGATCATTGTGGGCGACAACTTCTTCGACGGTTTGCAGGTGGTGTTCGGCACCATGCTGGTGTGGAGCGAGCTAATCACATCGCATGCGATACGCGTCCAAACCCCACCTAGACACATCCCCGGTGTGGTTGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTCGCTTTGTCTATGTCTCAGCACTCAACGAACCCACAATCGACTATGGCTTCCAGCGACTGCAGAAGCTCATCCCACGGCATCCCGGCGATCCCGAGAAACTGCAAAAGGAGATCATACTCAAGCGGGCCGCAGATCTCGTTGAGGCTCTCTACTCAATGCCCAGCAGATCGCCCGGTGGCTCCACCAGCTTCAATTCGTATGCGGGTCAGCTGGCGGTGAGCGTACAGGATGGCTCCGGCCAGTGGACAGAGGATGACTATCAGCGCGCCCAATCGAGCAGTGTCAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGTGGCTCCTACGGGGCCACAGCAACCACCGCCAGCGTTGCAGGCACTGCAAACGGCTATGCGCCCGCCCCCAATATGGGCACGCTCTCCTCCTCACCCGGCAGCGTCTTCAACTCCACATCAATGTCCATGTCGACGCCTTGGCATTCGGCTCTTGTGCAGCATCATCATGTCGCCGCCGCCTCCACACACCCGCATCActatccgcatccgcatcagcCCTGGCACAATCCTGCCGttacagcagcgacagcggccGCAGTTTAA
- Protein Sequence
- MGLSPIEMALANQRRAHNDILFRFPNGFPFAFCTAPLTSTESFKLRSEEPVPGFSSASPWPTLELGMEWGRKLYPTAGPRSAGGLMFTLPPTAADMNQPRGPMTAMKDEPLSGRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAGTANGYAPAPNMGTLSSSPGSVFNSTSMSMSTPWHSALVQHHHVAAASTHPHHYPHPHQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -