Dneo008450.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila neotestacea
Gene Symbol
pnr
Assembly
GCA_035044365.1
Location
JAWNMD010000214.1:32155-37115[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-16 3.2e-13 49.2 2.5 1 35 732 765 732 766 0.98

Sequence Information

Coding Sequence
atgtataatgtACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCCCAGatctacaaatttataatagtGAGACAAGCCCAAATGAAACAGTTAGCAGCCAACATCAATTTATCGTTAATCAGTgcaatattaatgaaaatgcatCCAAATGTGGATGTAATGCTTTGGACCCAAATACATGTTGCTGCCAATGTGATGATAACCCGTTATCAGCAGTGCATAGCAATATTGAAGTGGAAATTTGCAATAATCCTAATTCTctacataaaaacaattacacaccGAGTGTGCCTTCTGCTATTATTGCCAACCCGCCATTCACAActgaaaacaatatatatgcTCGCATGTTTTCCAACAAAAATAGGCTGCAAACTCAACCAGCAGCATTACAAAAAGAAGTAATAATCAGCGAATCCACAACAAATCCAATTGGCCAGGAGgagcaacaatttcaacacAAGCAACATGATATTGTCATCGATAATGCAAAATCGACATCAACAAAACATGTATTTCATGATATCGGCGATAATACTTCAACCAACGAAAATTACAATCAAGAGCATAAAGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTACCGAATGATGGATTCCCTTCAATAATCTGCCTTGAGTGTCGGACAAAGCTTGATTCGTTTTGGAAATTTCGCAACATGGCGCTTAATTCACATTTGGCTTTAAGAGAATTTTTAGCATTGTCGGAATCGTCTAAGCTTgattcaaattatttggaaagcaagcttgatgaaattttaaaatcaacttCCGAGGCAATAGCGGCAAAGGCACTGACTGAACTGAGCAAATCTTCAAAAACAAGATACAGCCAACGGCAACCAAAACTTGATGGTATTTTAAATTCCGCAAAGGATATAGATTGTCAGATTGTCAGAAGTCAGATTGAAAATAACATAAGAGATATGAAAAACCCTTTattgtatacaaatatgtttgAAAGTTCATCCCTATCACAAACATCTAGTAGTAATGCTATTGAAAAAGAGCCGATAATGATTCAAGATAATATTATGACATCGCGTACAGCAACAAACACAgtaacaactacagcaacaacaacagcaattaaaaCAGATAAATTCTTTGAATTAGATAATGGCACggcaaataattcaaaagatCCAGATGTTGAACAATATAagaacttgcaacaacaactagagaCTGCCGCAGTGCTTATGGatataagtaaaaaaattgtCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTCTCTGCAATTGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATCGATAACGAGATGCAAGATAGCGTTGAAATCGACTTATCagtgaaaaagaagaaacatgAATATTCTACTGAACGGAATGTagccccaacaacaacaacagcaacaacaatagcagcaaacACAGCCCGTAATTTTGGTCAACCTCCAATACATGATATCCATGCGAATCCTATAAGGATTGATGGCGATCTTAAGAATTATAGTATTACTATCAATGAAGTTGGTTCGTCTAGTTACcaattgaatacaaaaaaactaaataccGAAAGTATTGCTACTTGTCTATCGGACTCTGAGGACAGCTCTGATTCGAATAAACTAGAAATGGATATTGCATCTGCTATGAATGATAGAAAGACACCGGAGAGCGTCAATTCTGATCATGCAACAGATGCAGCGACGACACAACTCTGGCAAGCATTAGCACGATCTGCTGctaaaaataaagagGAATCGCGAGCAACGCAACTATTGCGAAACATGATGAACCAAACTTTTGTATTTCCTGTGCCGTCGACCATAGCATTGACAAAAGTACCTGAAGAACCAATACCACTTTTAAAGGATATGTCTGAATCTCAATCGAGTGTTGTCAAAATATGTAGAAGAAAGCAAAGTTTTCCTACTAAAACAGATTGCATCGAGTCTCCAGATATTAAGGTGACCGATACTTTCGTTCGTTCCGAAAGTGTATCAAATACATTGCAAGAAGGAATCAAAGACAAAAAGAGCctaaaatgcaacagcagtagcagcaatgCTTTGTCTACTACATCACAAAAGGATATGTCTTGCTCCAATTGTGGTACTCTAACAACAACCATTTGGAGACGTAGCGTTCGAGGCGAAATGGTTTGTAACGCATGCGGATTGTACTTTAAACTACATGGCGTAAATAGGCCCCATTCTATGAGACGCGATACCATCCATACTCGGCGCAGGCGTCCAAAAGAATGCGAGAAATCGAAAAAAAGAAACCGGCAATTACCCTGCAACACGGCGGTAGACTATGAATCGCATAACATCAGTAGTCCCGCAGAATGCAAGAAGCTGGATTTATCGATAAACCAGGAAACACTCAGTATTTCAGATCTAGTATTTAGCaaatacaaaacagaTTTATCTGAACCAGGAGGAGCGGCAGCAACACTGAAAGATGTCATTTTAAAACGGAAAAAATCACAATCTTTGCCTGAGTTTAATGATACTTGCGAAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAacgccaaataa
Protein Sequence
MYNVPHKYRQVCRLCLTLVNECDIPDLQIYNSETSPNETVSSQHQFIVNQCNINENASKCGCNALDPNTCCCQCDDNPLSAVHSNIEVEICNNPNSLHKNNYTPSVPSAIIANPPFTTENNIYARMFSNKNRLQTQPAALQKEVIISESTTNPIGQEEQQFQHKQHDIVIDNAKSTSTKHVFHDIGDNTSTNENYNQEHKDDSSPHITIQIFNCLSIKPLPNDGFPSIICLECRTKLDSFWKFRNMALNSHLALREFLALSESSKLDSNYLESKLDEILKSTSEAIAAKALTELSKSSKTRYSQRQPKLDGILNSAKDIDCQIVRSQIENNIRDMKNPLLYTNMFESSSLSQTSSSNAIEKEPIMIQDNIMTSRTATNTVTTTATTTAIKTDKFFELDNGTANNSKDPDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSAIVDTSIKSSVIKSKRPSIDNEMQDSVEIDLSVKKKKHEYSTERNVAPTTTTATTIAANTARNFGQPPIHDIHANPIRIDGDLKNYSITINEVGSSSYQLNTKKLNTESIATCLSDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHATDAATTQLWQALARSAAKNKEESRATQLLRNMMNQTFVFPVPSTIALTKVPEEPIPLLKDMSESQSSVVKICRRKQSFPTKTDCIESPDIKVTDTFVRSESVSNTLQEGIKDKKSLKCNSSSSNALSTTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNTAVDYESHNISSPAECKKLDLSINQETLSISDLVFSKYKTDLSEPGGAAATLKDVILKRKKSQSLPEFNDTCEGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00529226;
90% Identity
iTF_00608847;
80% Identity
-