Dneo004728.1
Basic Information
- Insect
- Drosophila neotestacea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035044365.1
- Location
- JAWNMD010000117.1:3443062-3454629[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-10 9.1e-07 28.7 0.0 3 41 332 371 330 375 0.86 2 2 1.2e-18 2e-15 56.4 0.0 1 43 806 849 806 851 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATTGCAGAGCAACAGCCCatatcaataataacaacagaaacagaaacagaaacaaaagtcgaagacaacagcaagaacTGCAAATTACTGAACCACCGTTTCGAGCAGCCCAACGGCCAACATTTCAACAGCAAGaacaccagcaacaccaacgGCGCACTGCAATTTGAAAGAGATTTTGACGACAACAACGTTACATcacacaacgacaacgactcAAGTGCAACATCACGTAGCTCAGGCTCACCGTCACCGTCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAACACCAAAGGCGAATTGGTGGCCGAAACAACGGCAAACGCgtccagcaacaacatcagcaacagtcaCATTTACAACGGCACAGCTGTGCACCAGcacgacagcgacagcaactcGAGCGCATCgctgcacaacaacagcagcaacaaaaacaacaacagcaacaatattaaaaatagcaacaacaaaagcagacaTAGAGCACACAcctctacaacaacaacaacaacaactggcacAGAGCCTTACATAgaaatttataagaaattagCCGAAATGACATCGATGGAATCAATGGCCGCCAAATTGGCACAGTTCACAATGATGGCCaatgatttcaatttgatgaGTACGCTGgccaatcaacaacaacaacaacagcaacagcagcaacagcttgCTAATTCGGTAACAACAACTACCTCAGATGCATCGGCAACAGCCGCAAGTCCCACACTCAAAGATACACCGAGTCCCAGTGCAGATGCCCCATTGGATCTAAGCAGCAAACCATCGCCAAATTCATCCATTAGCGGTGACATAAAGACAGTGAGAGGCCTTTCCGAGTGTGCCACACCTGTGCCTGCAGCAGGACGCACCTATGAGGATCTGAATAACGCGTTGCAGGATGTGCTGGCCAATAAGCTGGGCACACGCAAGGCATCCAGTCAATATCACGTGCCGCGCTCCACGTTGCGCAACAAACTGTGCAAAATGTCGCTAGATGCAAAGCAACAGCTGAAACAtgaactggaactggaggAGCAGGATGAGTCTGGTGAAGAAGGCAATGATGGTGATAGCAATGCGTCAACGCCAGCGTCGGGCTTTCAGGAGTTTGCCCAACGCATTGCGGCCACAGAGCATTTGCGTAAATTGAGCAACATGTCCGAGCACAATGGCAGTGACCTGGGCGATGACTTGGAGCCGGTGATGTCGCCAAAGCTGGCCAGGCCACAAAGTGGTACGCCAACGGGAATTCAAGGGATTCAAGGAGCCGGTGTATTGCCCATGACCATTGATCCCAACGTATTGTTGCATACGTTGGTGTTGGCAGCGGGAATCGGAGTGATGCCCAAATTGGATGAGACGCAAACGCTGGGGGATCTGGTGAAATCATTGGTGATGGCAAACAGCGGAGGGATTATAAATGAAGGTTTGGCCAATGCGATACCTGGCAGTCATGAGAGCAATGGCAGCCTGCttcagcaacaccaacaccaacaccaccagcaacagcagcagcaacatcaacagcatcaccagcagcaccaacagTTGGGAGCCTTTCGTCGTCATCCACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCATTGGATGCCAATGAGATTTGCGAGGATCCTATATTGAAGATTCCGTCCTTTAAGGTCAGCGGCGCTGGCAACATTTCGCCTACGCTACACTGcaacagcagtggcagcagcagcaacatcaacaacatcagccacaacaataacaacaattcaattaacaacagcaatcgtAATGGCGATCACAGTCCGCACTCTGCCTCTCCAATGctggcagcagctgttgccgctgcggcagccaacaacagttacagacagagcaacagcagcagtctGTTGTCGCCGTCACAAACATCAATACAGAAAAtgatggcaacaacaatacagcgCAAGATCAATGAGCAGAGCAATCAGGACAATCTGTTGTCGAGTCTGGACAAgcgcaacaatggcaacaccaGTGGCAGCGAGTGTAGCAGCAgcggaggaggaggtggaagCGGTGGTAATGGCAatgtcagcagcagcagcaactacaagaAGCCGAGCATTTCTGTGGCCAAAATCATTGGCGGCACAGATACCTCACGCTTCGGTGCCTCACCCAATCTACTTGCCCAGCAACATCATAGTCATCTGCCCGCTCATCATGTCGCccatcagcatcatcagcaacaactgaGTGCCCAGGATGCTGCCGCATTGGCTGCGGGCAAAGGGACGCGTCCGAAGCGTGGCAAGTATCGTAATTACGATAGGGATAGTCTTGTGGAGGCGGTCAAGGCGGTGCAACGTGGTGAGATGTCTGTACATCGAGCAGGCAGTTATTATGGTGTGCCACACTCGACACTGGAGTACAAGGTTAAGGAGCGTCATTTGATGCGACCACGAAAGCGTGAGCCGAAACCGCAACCAGATCTCGTGGGATTGACAGGAGCTGCGAATAAGGCTTCCAATTTGGTCGGGCTTAATCAGCTGGACAAACTGAAGGCCAGCAGCACCCACAGCgccaacatcaacaataacaacagttcCGGCTCAAAGCTGAGCAATGCCttgaaaaacaacagcagtgCATCAGCTGCGGCAGCAACACCCAATGGCATCAAAATGCCCATCTTTGATGGTGCCCCACAATTGTCTTTCCAGGCAAACATGTTCTGGTCGCCGCCAAATGCCGGGGCCCCTTTTGGCCTGGACTTTAATCGCAATCCGGAATTTCTAAAGACCCATTTGGTTGAGGTAATGCGTAGCAGTCCAATTAATCCCAATGCTCATCATGGCCGTCACTCGATTGCTCATGAGTATACGGAGAACATGTACGATGACATCATACGGAAGACTCTCAAGAATGAGGGCGATgtcggcaacagcaacagcagtggcaatgccaatgccaatgcatTGTTGGACCAACTGTTGGTAAAAAAGACCCCGCTGCCATTTACCAATAATCGTAGCAATGATTATATTGCTgctgccgcagcagcagctgcctgTTCTAGCTCCGATGGTGTCAAAAGAGCGGGCAGCCCTATGGGAGCCTATGCGGACATCAAGAGGGAGCGTCTCAGTCCTATGCGAAGTGCAGAGAGTACTAGCAGCGATGAGGATCATGAGCattccaccaccaccaacaacaacaacaacaacaataacaacagtgaCCTGGCGctcaacaaaaacagcagcaacaataacaacaatggcaacagcaatggaAATGGTCGCAGTCGCATGACATCACGCGACTCGGAAACGGATGTCAGCAGTCTGAAAAGCGAGCAATCGCACAGCTCGGCACAACTTGccacagctgcaacagcaacaccagcaggCAAGAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGAGccggaaacaacaacagcaacaacgccCATCACGTCCAGCAGTTCCATATTACACGAGAAACTGGCACAGATCAAGGCCGAGCAGTCTGAAGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTRNQLNIAEQQPISIITTETETETKVEDNSKNCKLLNHRFEQPNGQHFNSKNTSNTNGALQFERDFDDNNVTSHNDNDSSATSRSSGSPSPSPPPEPNDWTPSDKCNFCVNGRLLTVNTKGELVAETTANASSNNISNSHIYNGTAVHQHDSDSNSSASLHNNSSNKNNNSNNIKNSNNKSRHRAHTSTTTTTTTGTEPYIEIYKKLAEMTSMESMAAKLAQFTMMANDFNLMSTLANQQQQQQQQQQQLANSVTTTTSDASATAASPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKTVRGLSECATPVPAAGRTYEDLNNALQDVLANKLGTRKASSQYHVPRSTLRNKLCKMSLDAKQQLKHELELEEQDESGEEGNDGDSNASTPASGFQEFAQRIAATEHLRKLSNMSEHNGSDLGDDLEPVMSPKLARPQSGTPTGIQGIQGAGVLPMTIDPNVLLHTLVLAAGIGVMPKLDETQTLGDLVKSLVMANSGGIINEGLANAIPGSHESNGSLLQQHQHQHHQQQQQQHQQHHQQHQQLGAFRRHPPKSETPETSSSLDANEICEDPILKIPSFKVSGAGNISPTLHCNSSGSSSNINNISHNNNNNSINNSNRNGDHSPHSASPMLAAAVAAAAANNSYRQSNSSSLLSPSQTSIQKMMATTIQRKINEQSNQDNLLSSLDKRNNGNTSGSECSSSGGGGGSGGNGNVSSSSNYKKPSISVAKIIGGTDTSRFGASPNLLAQQHHSHLPAHHVAHQHHQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKASNLVGLNQLDKLKASSTHSANINNNNSSGSKLSNALKNNSSASAAAATPNGIKMPIFDGAPQLSFQANMFWSPPNAGAPFGLDFNRNPEFLKTHLVEVMRSSPINPNAHHGRHSIAHEYTENMYDDIIRKTLKNEGDVGNSNSSGNANANALLDQLLVKKTPLPFTNNRSNDYIAAAAAAAACSSSDGVKRAGSPMGAYADIKRERLSPMRSAESTSSDEDHEHSTTTNNNNNNNNNSDLALNKNSSNNNNNGNSNGNGRSRMTSRDSETDVSSLKSEQSHSSAQLATAATATPAGKNKMMDLNGSNSVKFEPETTTATTPITSSSSILHEKLAQIKAEQSEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00528722;
- 90% Identity
- iTF_00608362;
- 80% Identity
- -