Dneo009896.1
Basic Information
- Insect
- Drosophila neoperkinsi
- Gene Symbol
- Gata6
- Assembly
- GCA_037043555.1
- Location
- JBAMBG010006276.1:8103-15112[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9 1.8e+04 -4.7 6.9 4 29 469 492 468 496 0.80 2 2 5.5e-17 1.1e-13 50.5 6.7 1 34 522 554 522 556 0.97
Sequence Information
- Coding Sequence
- ATGGTTTGCAATAGTATTGAAATTGTCGATATCAAGATGCAGGTGAAGATGGAAGCGCAGACGAcggcgcagcaacagcagcagcagcaacaacagcaacaactgcaacaacagcagcagcagcaacaagtgctgagcaaacaacagctgcaattgctggataaaatcaaaattgagaCTAGCAACGGCAACGATCCACAAGCCAATACCGTTCTGGaggagcaacaggagcagcaaacaacaacaactgtaggCGTTCTAGTGCAGACGAGCAGTCAGGCCAGCGAATCCGacgatcagcagcagcagcagacacagcAGACACAATACGTTGTAGTTCCGCGCACACAGCAGCGACGCATCCTAACAACAGCGGGTACACTCGAACTGAACGAGGCGCATGAGGGCGAccacagcaccaacaacagcagcaccgcCAGTTCGAATTCGGCACCCGAGACGCATATTGAGTATCAGCGGAGTTCGCATCACTCGCCCCACTATATTCAAATGGCGCCGCGGACAGCGGCCGAGGTCGCCGATCAGGTGGCACATCCTAGCACACTCTATGCGTATCCCTCGGGCCAGATCATATGCAGCAGCGATGATGTGGCGCCCATTAAAATGGAGACAATTGACAAGAGCGATGTTTCGGGTGAatcgcagttgcagcaacCCCAGCAACTAACACaccggcagcaacaacagcagcaatgtcCCACACCCAATGGCGGACCTTATGGTGAAACCATTGTGGTCAGCAGCGAGGGTGTATTGCAGcatcatcaccagcagcagcaacagcaacagcagcaacaacagcaacatcatcagcagcaacaagcagcagtggctgccgccgcagctgttgcagccgCTCACACGCACAGCGTACGTTATGTAACGGAGGACACGCCCGGCGGAAATCTGTACTATGAAACGCCCGTTGTGGATGCCAGCGTGCATGCAAATGAGTCAAAGACCTATGCGGATTTGGGCAATGCCTATGCAACGTTTACGCCCAACACGAcgttcagcagcaacagttatACGACGGCAACATTGCAGCAGGGCAACACCATTTACAGTGTGCCTGGGACGACACAGTTCATAACCAAATCCGATCCGAACTTAAATCCGTTGAGGCAGGCGCCAACGGTCCCATATCAAGCGCTATCGTTTATAGACAGTGCCAGTGGTGCTGATCCTGGGCTGTGGACAACGACTGGTGGCGATTATCCGAATGTGTCCTTTACGAACTATCAAACGCAGGTCATTGATGAATATCCCACGAGCAACATGACAGCCGCCCACTGGACACCCGCTGGCAGCATTGGCAACTATGATCACGGATTGGCAGCGACCAGCGCAATATCCTCAACCACCCATATGACGGAGCTGAAGTGCGACACCTGTCAGACATCGTTCATGCGCAAGGGCAACGAGTGGCCCAACTGCCCCAATTGCACCAGCTATGGACGCAACCAGGTGGGACGGCATGTGCCACAGCGCCAGAAGCCGAAGGCAGCCGCTGCGCCAAACAATCGCCGCAATGGAGTCACATGCGCCAACTGTTCGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTCTGCAATGCCTGCGGACTTTATTTCAAGCTGCACAACATGAATCGACCCTTGTCCATGAAGAAGGAGGGCATTCAGAAACGCAAGCGCAAACCAAAGAACAACGGAGCATCTGTACCCCATCGAGTGCTGCCAAgCATGTCGCAGGGTGTTAATTTGATGGTGAACAATGGCTTAGTGTATCCATCACAGGTGACTGTGGGATTGCCGAATAGCCAACAGAATGCGAGTCCCGAGCTGCATGATATGTCTGCAACTGGACCCGCTGGCGGACAGCGTGTGGTGACCATTCCGCTTAATCCCGCAGTGCCGACATCCGATAGCACATTGAACATGTCGCGTCATCATGTGACGAGCGAAAGTCACTCGCCTttcagccaacagcagcagcagcagcagcagcaacaacagcagcaacaacagcaacaacaacaacagcagcaacaacaacagcagcagcagcagcagcctccgTCACAGAGTCAATCGCCACATCTGCCCAACTCGGTCACACTGAACCGTCAGATTGCACAGTCTGTTCCTCCAATCGAAAGTGGTCGCAGTTCCAATAGCGAGCTGACTCCAACTGTTATCACGTGCACAGGTCTGCCAGAGCGCTCATCGAATAACTAA
- Protein Sequence
- MVCNSIEIVDIKMQVKMEAQTTAQQQQQQQQQQQLQQQQQQQQVLSKQQLQLLDKIKIETSNGNDPQANTVLEEQQEQQTTTTVGVLVQTSSQASESDDQQQQQTQQTQYVVVPRTQQRRILTTAGTLELNEAHEGDHSTNNSSTASSNSAPETHIEYQRSSHHSPHYIQMAPRTAAEVADQVAHPSTLYAYPSGQIICSSDDVAPIKMETIDKSDVSGESQLQQPQQLTHRQQQQQQCPTPNGGPYGETIVVSSEGVLQHHHQQQQQQQQQQQQHHQQQQAAVAAAAAVAAAHTHSVRYVTEDTPGGNLYYETPVVDASVHANESKTYADLGNAYATFTPNTTFSSNSYTTATLQQGNTIYSVPGTTQFITKSDPNLNPLRQAPTVPYQALSFIDSASGADPGLWTTTGGDYPNVSFTNYQTQVIDEYPTSNMTAAHWTPAGSIGNYDHGLAATSAISSTTHMTELKCDTCQTSFMRKGNEWPNCPNCTSYGRNQVGRHVPQRQKPKAAAAPNNRRNGVTCANCSTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGASVPHRVLPSMSQGVNLMVNNGLVYPSQVTVGLPNSQQNASPELHDMSATGPAGGQRVVTIPLNPAVPTSDSTLNMSRHHVTSESHSPFSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPSQSQSPHLPNSVTLNRQIAQSVPPIESGRSSNSELTPTVITCTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00577430;
- 90% Identity
- iTF_00559151;
- 80% Identity
- -